Gene annotation
Transcriptome id Sobic.001G391300.1
Synonym AtGolS1, GolS1, Sb01g037090
Functional annotation "Expressed in drought, cold and heat" (PubMedID : 29862293)
SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
Up-reguralion under heat (PubMedID : 24916767)
glycosyl transferase 8 domain containing protein, putative, expressed
UniProt C5X1V2
Pfam PF01501
Panther DB PTHR11183 PTHR11183:SF33
NCBI CDD KOG1950; Glycosyl transferase, family 8 - glycogenin
KEGG Orthology K18819; inositol 3-alpha-galactosyltransferase
Gene Ontology GO:0016757; transferase activity, transferring glycosyl groups GO:0006012galactose metabolic process


Orthologs (automatic annotation)
TAIR AT2G47180 : galactinol synthase 1
RAP-DB (Rice) LOC_Os03g20120.1 : glycosyl transferase 8 domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a002215 , Zm00025a049213 , Zm00025a052508
Brachypodium KQK21944 , KQK14552
Barley HORVU2Hr1G016440.11 , HORVU4Hr1G052450.2 , HORVU4Hr1G052450.3 , HORVU4Hr1G052450.1 , HORVU4Hr1G052450.6 , HORVU2Hr1G016440.1 , HORVU2Hr1G015720.3 , HORVU2Hr1G015720.2 , HORVU2Hr1G015720.1 , HORVU2Hr1G015740.1 , HORVU2Hr1G015700.1 , HORVU2Hr1G015700.3 , HORVU2Hr1G015700.2 , HORVU2Hr1G015700.4
Wheat TraesCS4D02G180800 , TraesCS2B02G112800 , TraesCS4B02G179300 , TraesCS2D02G093000 , TraesCS2B02G109700 , TraesCS2A02G094500 , TraesCS2D02G095800 , TraesCS2A02G094700 , TraesCS2D02G093100 , TraesCS4A02G125300 , TraesCS2B02G109800 , TraesCS2B02G109400 , TraesCS2A02G097400 , TraesCS7B02G493200
Populus -


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cDNA sequences
Sobic.001G391300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G097300 phosphoethanolamine/phosphocholine phosphatase, putative, expressed K13248: pyridoxal phosphate phosphatase PHOSPHO2
2 Sobic.004G276200 peptide transporter PTR2, putative, expressed -
3 Sobic.002G086800 expressed protein -
4 Sobic.006G220200 CPuORF12 - conserved peptide uORF-containing transcript, expressed K17839: PAO4, PAO3, polyamine oxidase
5 Sobic.004G332100 zinc finger, C3HC4 type domain containing protein, expressed -
6 Sobic.003G339700 Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.12 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
7 Sobic.001G087700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oligopeptide transporter, putative, expressed -
8 Sobic.001G470900 sulfate transporter, putative, expressed K17469: sulfate transporter 2, low-affinity
9 Sobic.009G183101 - -
10 Sobic.001G426800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RNA recognition motif containing protein, expressed -
11 Sobic.003G313900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@jacalin-like lectin domain containing protein, expressed -
12 Sobic.006G150400 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
13 Sobic.007G160200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@-(PubMedID : 26976818)@mitochondrial carrier protein, putative, expressed K15104: SLC25A11, solute carrier family 25 (mitochondrial oxoglutarate transporter), member 11
14 Sobic.010G092600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aquaporin protein, putative, expressed K09874: aquaporin NIP
15 Sobic.009G195800 Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.25 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K07198: PRKAA, 5'-AMP-activated protein kinase, catalytic alpha subunit
16 Sobic.001G523200 CBL-interacting protein kinase 9(PubMedID : 26465154)@CBL-interacting protein kinase 9(PubMedID : 26465154)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.15 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
17 Sobic.006G220300 - -
18 Sobic.003G425500 Calcium-binding protein(PubMedID : 24906815)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsCML10 - Calmodulin-related calcium sensor protein, expressed K13448: calcium-binding protein CML
19 Sobic.008G171000 methyltransferase domain containing protein, putative, expressed K12502: VTE3, MPBQ/MSBQ methyltransferase
20 Sobic.006G066800 1,4-alpha-glucan-branching enzyme, chloroplast precursor, putative, expressed K00700: GBE1, 1,4-alpha-glucan branching enzyme


Gene co-expression network
sample Sobic001G391300 Sobic001G391300 Sobic004G097300 Sobic004G097300 Sobic001G391300--Sobic004G097300 Sobic004G276200 Sobic004G276200 Sobic001G391300--Sobic004G276200 Sobic002G086800 Sobic002G086800 Sobic001G391300--Sobic002G086800 Sobic006G220200 Sobic006G220200 Sobic001G391300--Sobic006G220200 Sobic004G332100 Sobic004G332100 Sobic001G391300--Sobic004G332100 Sobic003G339700 Sobic003G339700 Sobic001G391300--Sobic003G339700 Sobic001G087700 Sobic001G087700 Sobic001G391300--Sobic001G087700 Sobic001G470900 Sobic001G470900 Sobic001G391300--Sobic001G470900 Sobic009G183101 Sobic009G183101 Sobic001G391300--Sobic009G183101 Sobic004G097300--Sobic001G391300 Sobic004G097300--Sobic004G276200 Sobic002G322000 Sobic002G322000 Sobic004G097300--Sobic002G322000 Sobic006G066800 Sobic006G066800 Sobic004G097300--Sobic006G066800 Sobic004G097300--Sobic006G220200 Sobic008G014200 Sobic008G014200 Sobic004G097300--Sobic008G014200 Sobic003G313900 Sobic003G313900 Sobic004G097300--Sobic003G313900 Sobic004G097300--Sobic002G086800 Sobic001G496300 Sobic001G496300 Sobic004G097300--Sobic001G496300 Sobic004G276200--Sobic001G391300 Sobic004G276200--Sobic009G183101 Sobic004G276200--Sobic008G014200 Sobic004G276200--Sobic003G339700 Sobic010G212100 Sobic010G212100 Sobic004G276200--Sobic010G212100 Sobic004G276200--Sobic004G097300 Sobic010G090301 Sobic010G090301 Sobic004G276200--Sobic010G090301 Sobic009G069300 Sobic009G069300 Sobic004G276200--Sobic009G069300 Sobic002G321300 Sobic002G321300 Sobic004G276200--Sobic002G321300 Sobic002G086800--Sobic001G470900 Sobic002G086800--Sobic001G391300 Sobic002G086800--Sobic001G087700 Sobic002G086800--Sobic004G332100 Sobic003G395900 Sobic003G395900 Sobic002G086800--Sobic003G395900 Sobic006G220300 Sobic006G220300 Sobic002G086800--Sobic006G220300 Sobic008G171000 Sobic008G171000 Sobic002G086800--Sobic008G171000 Sobic003G389700 Sobic003G389700 Sobic002G086800--Sobic003G389700 Sobic002G086800--Sobic006G220200 Sobic006G220200--Sobic006G220300 Sobic010G092600 Sobic010G092600 Sobic006G220200--Sobic010G092600 Sobic006G220200--Sobic001G391300 Sobic002G148700 Sobic002G148700 Sobic006G220200--Sobic002G148700 Sobic002G216400 Sobic002G216400 Sobic006G220200--Sobic002G216400 Sobic006G220200--Sobic001G496300 Sobic003G238000 Sobic003G238000 Sobic006G220200--Sobic003G238000 Sobic001G110900 Sobic001G110900 Sobic006G220200--Sobic001G110900 Sobic009G155700 Sobic009G155700 Sobic006G220200--Sobic009G155700 Sobic004G332100--Sobic001G391300 Sobic007G160200 Sobic007G160200 Sobic004G332100--Sobic007G160200 Sobic004G332100--Sobic006G220300 Sobic004G332100--Sobic003G339700 Sobic004G332100--Sobic001G110900 Sobic004G332100--Sobic002G086800 Sobic004G332100--Sobic009G069300 Sobic004G332100--Sobic001G470900 Sobic004G332100--Sobic001G087700 Sobic002G417300 Sobic002G417300 Sobic003G339700--Sobic002G417300 Sobic003G381700 Sobic003G381700 Sobic003G339700--Sobic003G381700 Sobic008G187100 Sobic008G187100 Sobic003G339700--Sobic008G187100 Sobic007G146400 Sobic007G146400 Sobic003G339700--Sobic007G146400 Sobic001G160800 Sobic001G160800 Sobic003G339700--Sobic001G160800 Sobic003G334000 Sobic003G334000 Sobic003G339700--Sobic003G334000 Sobic001G057700 Sobic001G057700 Sobic003G339700--Sobic001G057700 Sobic003G339700--Sobic009G069300 Sobic003G339700--Sobic006G066800 Sobic001G087700--Sobic001G470900 Sobic001G087700--Sobic002G086800 Sobic001G087700--Sobic001G110900 Sobic001G087700--Sobic001G391300 Sobic001G087700--Sobic006G220300 Sobic001G087700--Sobic007G160200 Sobic001G087700--Sobic003G389700 Sobic001G087700--Sobic010G092600 Sobic001G087700--Sobic004G332100 Sobic001G470900--Sobic001G087700 Sobic001G470900--Sobic002G086800 Sobic001G470900--Sobic001G496300 Sobic001G470900--Sobic006G220300 Sobic001G470900--Sobic001G110900 Sobic004G058700 Sobic004G058700 Sobic001G470900--Sobic004G058700 Sobic001G470900--Sobic003G389700 Sobic001G498000 Sobic001G498000 Sobic001G470900--Sobic001G498000 Sobic001G470900--Sobic004G332100 Sobic001G426800 Sobic001G426800 Sobic009G183101--Sobic001G426800 Sobic009G183101--Sobic009G069300 Sobic009G183101--Sobic004G276200 Sobic004G315600 Sobic004G315600 Sobic009G183101--Sobic004G315600 Sobic009G183101--Sobic002G417300 Sobic009G183101--Sobic003G339700 Sobic004G323400 Sobic004G323400 Sobic009G183101--Sobic004G323400 Sobic009G195800 Sobic009G195800 Sobic009G183101--Sobic009G195800 Sobic009G183101--Sobic010G090301
Octagon: transcription factors


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