Gene annotation
| Transcriptome id | Sobic.001G523200.1 |
|---|---|
| Synonym | CIPK9, Sb01g048750, PKS6, SnRK3.12, SbCIPK09,CBL-interacting protein kinases |
| Functional annotation | CBL-interacting protein kinase 9 (PubMedID : 26465154) CBL-interacting protein kinase 9 (PubMedID : 26465154) SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543) Interacting factor of CBLs (PubMedID : 19860013) CAMK_KIN1/SNF1/Nim1_like.15 - CAMK includes calcium/calmodulin depedent protein kinases, expressed |
| UniProt | C4P7S1 |
| Pfam | PF14531 PF03822 |
| Panther DB | PTHR24347 PTHR24347:SF140 |
| NCBI CDD | KOG0583; Serine/threonine protein kinase |
| KEGG Orthology | - |
| Gene Ontology | GO:0007165; signal transduction |
Orthologs (automatic annotation)
| TAIR | AT1G01140 : CBL-interacting protein kinase 9 |
|---|---|
| RAP-DB (Rice) | LOC_Os03g03510.1 : CAMK_KIN1/SNF1/Nim1_like.15 - CAMK includes calcium/calmodulin depedent protein kinases, expressed |
| MaizeGDB (Corn) | Zm00025a053478 , Zm00025a032221 , Zm00025a000355 |
| Brachypodium | KQK23877 , KQK23884 |
| Barley | HORVU4Hr1G083080.2 , HORVU4Hr1G083080.13 , HORVU4Hr1G083080.12 , HORVU4Hr1G083080.11 , HORVU4Hr1G083080.10 , HORVU4Hr1G083080.9 , HORVU4Hr1G083080.8 , HORVU4Hr1G083080.3 , HORVU4Hr1G083080.1 , HORVU4Hr1G083080.7 , HORVU4Hr1G083080.6 , HORVU4Hr1G083080.5 , HORVU4Hr1G083080.4 |
| Wheat | TraesCS5A02G492000 , TraesCS4D02G316500 , TraesCS4B02G319900 |
| Populus | - |
JBrowse
| Sobic.001G523200 |
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.009G195800 | Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.25 - CAMK includes calcium/calmodulin depedent protein kinases, expressed | K07198: PRKAA, 5'-AMP-activated protein kinase, catalytic alpha subunit |
| 2 | Sobic.003G238000 | ras-related protein, putative, expressed | K07936: GTP-binding nuclear protein Ran |
| 3 | Sobic.006G267900 | SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Homologous to Dof genes in Arabidopsis and rice.(PubMedID : 21161392)@dof zinc finger domain containing protein, putative, expressed | - |
| 4 | Sobic.002G293300 | octicosapeptide/Phox/Bem1p, putative, expressed | - |
| 5 | Sobic.002G189000 | homeobox associated leucine zipper, putative, expressed | K09338: homeobox-leucine zipper protein |
| 6 | Sobic.004G315600 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oxidoreductase/ transition metal ion binding protein, putative, expressed | - |
| 7 | Sobic.010G260300 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein | - |
| 8 | Sobic.001G436000 | expressed protein | - |
| 9 | Sobic.009G183101 | - | - |
| 10 | Sobic.009G231200 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@protein of unknown function DUF1421 domain containing protein, expressed | - |
| 11 | Sobic.001G391300 | "Expressed in drought, cold and heat"(PubMedID : 29862293)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@glycosyl transferase 8 domain containing protein, putative, expressed | K18819: inositol 3-alpha-galactosyltransferase |
| 12 | Sobic.001G333600 | membrane-anchored ubiquitin-fold protein, putative, expressed | - |
| 13 | Sobic.007G160200 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@-(PubMedID : 26976818)@mitochondrial carrier protein, putative, expressed | K15104: SLC25A11, solute carrier family 25 (mitochondrial oxoglutarate transporter), member 11 |
| 14 | Sobic.004G059900 | bZIP transcription factor domain containing protein, expressed | - |
| 15 | Sobic.001G420100 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DnaK family protein, putative, expressed | K03283: heat shock 70kDa protein 1/2/6/8 |
| 16 | Sobic.007G140900 | similar to Putative uncharacterized protein(PubMedID : 29862293)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.33 - CAMK includes calcium/calmodulin depedent protein kinases, expressed | - |
| 17 | Sobic.003G141800 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@polygalacturonase, putative, expressed | - |
| 18 | Sobic.004G155150 | - | - |
| 19 | Sobic.003G066900 | expressed protein | - |
| 20 | Sobic.003G188000 | TKL_IRAK_DUF26-lf.2 - DUF26 kinases have homology to DUF26 containing loci, expressed | - |
Gene co-expression network
Octagon: transcription factors
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