Gene annotation
| Transcriptome id | Sobic.007G160200.1 |
|---|---|
| Synonym | UCP5, Sb07g023340,DIC2, ATPUMP5, DIC1 |
| Functional annotation | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543) - (PubMedID : 26976818) mitochondrial carrier protein, putative, expressed |
| UniProt | C5YMN8 |
| Pfam | PF00153 |
| Panther DB | PTHR24089 PTHR24089:SF364 |
| NCBI CDD | KOG0759; Mitochondrial oxoglutarate/malate carrier proteins |
| KEGG Orthology | K15104; SLC25A11, solute carrier family 25 (mitochondrial oxoglutarate transporter), member 11 |
| Gene Ontology | - |
Orthologs (automatic annotation)
| TAIR | AT4G24570 : dicarboxylate carrier 2 |
|---|---|
| RAP-DB (Rice) | LOC_Os08g37370.1 : mitochondrial carrier protein, putative, expressed |
| MaizeGDB (Corn) | Zm00025a005467 |
| Brachypodium | KQJ90569 , KQJ98682 |
| Barley | HORVU5Hr1G069700.11 , HORVU5Hr1G078950.2 , HORVU5Hr1G078950.1 , HORVU5Hr1G078970.1 , HORVU5Hr1G069700.5 , HORVU5Hr1G069700.4 , HORVU5Hr1G069700.6 , HORVU5Hr1G069700.1 , HORVU5Hr1G069700.3 , HORVU5Hr1G069700.2 , HORVU5Hr1G069700.9 , HORVU5Hr1G078980.1 |
| Wheat | TraesCS5B02G300300 |
| Populus | - |
JBrowse
| Sobic.007G160200 |
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.007G140900 | similar to Putative uncharacterized protein(PubMedID : 29862293)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.33 - CAMK includes calcium/calmodulin depedent protein kinases, expressed | - |
| 2 | Sobic.004G332100 | zinc finger, C3HC4 type domain containing protein, expressed | - |
| 3 | Sobic.001G087700 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oligopeptide transporter, putative, expressed | - |
| 4 | Sobic.009G037800 | phosphoglycerate mutase, putative, expressed | - |
| 5 | Sobic.001G391300 | "Expressed in drought, cold and heat"(PubMedID : 29862293)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@glycosyl transferase 8 domain containing protein, putative, expressed | K18819: inositol 3-alpha-galactosyltransferase |
| 6 | Sobic.002G184600 | uncharacterized glycosyl hydrolase Rv2006/MT2062, putative, expressed | K01087: trehalose 6-phosphate phosphatase |
| 7 | Sobic.001G523200 | CBL-interacting protein kinase 9(PubMedID : 26465154)@CBL-interacting protein kinase 9(PubMedID : 26465154)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.15 - CAMK includes calcium/calmodulin depedent protein kinases, expressed | - |
| 8 | Sobic.003G238000 | ras-related protein, putative, expressed | K07936: GTP-binding nuclear protein Ran |
| 9 | Sobic.009G195800 | Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.25 - CAMK includes calcium/calmodulin depedent protein kinases, expressed | K07198: PRKAA, 5'-AMP-activated protein kinase, catalytic alpha subunit |
| 10 | Sobic.004G059900 | bZIP transcription factor domain containing protein, expressed | - |
| 11 | Sobic.003G425500 | Calcium-binding protein(PubMedID : 24906815)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsCML10 - Calmodulin-related calcium sensor protein, expressed | K13448: calcium-binding protein CML |
| 12 | Sobic.001G110900 | MYB family transcription factor, putative, expressed | K09422: transcription factor MYB, plant |
| 13 | Sobic.001G470900 | sulfate transporter, putative, expressed | K17469: sulfate transporter 2, low-affinity |
| 14 | Sobic.003G339700 | Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.12 - CAMK includes calcium/calmodulin depedent protein kinases, expressed | - |
| 15 | Sobic.006G150400 | SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein | - |
| 16 | Sobic.010G021800 | Arginine decarboxylase(PubMedID : 27325899)@Up-regulated by silicon application under drought stress(PubMedID : 24813726)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pyridoxal-dependent decarboxylase protein, putative, expressed | K01583: arginine decarboxylase |
| 17 | Sobic.001G436000 | expressed protein | - |
| 18 | Sobic.003G334000 | expressed protein | - |
| 19 | Sobic.003G354900 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@regulator of chromosome condensation, putative, expressed | - |
| 20 | Sobic.003G032900 | expressed protein | - |
Gene co-expression network
Octagon: transcription factors
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