Gene annotation
Transcriptome id Sobic.002G184600.1
Synonym Sb02g023260
Functional annotation uncharacterized glycosyl hydrolase Rv2006/MT2062, putative, expressed
UniProt C5XBB3
Pfam PF02358
Panther DB PTHR10788 PTHR10788:SF19
NCBI CDD -
KEGG Orthology K01087; trehalose 6-phosphate phosphatase
Gene Ontology GO:0005992; trehalose biosynthetic process GO:0003824catalytic activity


Orthologs (automatic annotation)
TAIR AT5G10100 : Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
RAP-DB (Rice) LOC_Os08g31630.1 : uncharacterized glycosyl hydrolase Rv2006/MT2062, putative, expressed
MaizeGDB (Corn) Zm00025a022126 , Zm00025a046718 , Zm00025a006067 , Zm00025a015246 , Zm00025a013816 , Zm00025a002697 , Zm00025a033170 , Zm00025a048808
Brachypodium KQJ90023 , KQJ98224 , KQK00643 , KQK00642 , KQK00641 , KQK00640 , KQK00645 , KQK00644 , PNT69180 , KQK01866 , KQK21468
Barley HORVU6Hr1G074960.8 , HORVU6Hr1G074960.9 , HORVU6Hr1G074960.4 , HORVU6Hr1G074960.5 , HORVU6Hr1G074960.6 , HORVU6Hr1G074960.7 , HORVU6Hr1G074960.2 , HORVU6Hr1G074960.3 , HORVU6Hr1G066240.1 , HORVU6Hr1G074960.21 , HORVU6Hr1G074960.20 , HORVU1Hr1G061580.3 , HORVU1Hr1G061580.2 , HORVU1Hr1G061580.4 , HORVU5Hr1G058300.5 , HORVU5Hr1G058300.4 , HORVU5Hr1G058300.6 , HORVU5Hr1G058300.1 , HORVU5Hr1G058300.3 , HORVU5Hr1G058300.2 , HORVU6Hr1G074960.18 , HORVU6Hr1G074960.19 , HORVU6Hr1G074960.16 , HORVU6Hr1G074960.17 , HORVU6Hr1G074960.14 , HORVU6Hr1G074960.12 , HORVU6Hr1G074960.13 , HORVU6Hr1G074960.10 , HORVU6Hr1G074960.11
Wheat TraesCS2A02G161100 , TraesCS5B02G193100 , TraesCS5B02G193100 , TraesCS5B02G193100 , TraesCS2B02G187000 , TraesCS2D02G168200 , TraesCS2B02G187200 , TraesCS5A02G190000 , TraesCS2D02G168100 , TraesCS5D02G200800 , TraesCS2B02G187100 , TraesCS6B02G330900 , TraesCS6B02G330900 , TraesCS6B02G330900 , TraesCS6A02G301800 , TraesCS6D02G281100 , TraesCS2A02G161200
Populus -


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cDNA sequences
Sobic.002G184600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G417500 potassium transporter, putative, expressed K03549: KUP system potassium uptake protein
2 Sobic.007G160200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@-(PubMedID : 26976818)@mitochondrial carrier protein, putative, expressed K15104: SLC25A11, solute carrier family 25 (mitochondrial oxoglutarate transporter), member 11
3 Sobic.007G011200 DNA binding protein, putative, expressed -
4 Sobic.004G331800 alginate regulatory protein AlgP, putative, expressed -
5 Sobic.003G290100 dual specificity protein phosphatase, putative, expressed -
6 Sobic.007G220700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@SAM dependent carboxyl methyltransferase, putative, expressed -
7 Sobic.003G375900 amino acid transporter, putative, expressed -
8 Sobic.001G161200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.17 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
9 Sobic.003G422700 amino acid permease family protein, putative, expressed -
10 Sobic.002G207300 tetraspanin family protein, putative, expressed -
11 Sobic.009G028500 zinc finger family protein, putative, expressed -
12 Sobic.004G086800 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
13 Sobic.010G179800 OsFBK16 - F-box domain and kelch repeat containing protein, expressed -
14 Sobic.003G424400 Spotted leaf protein(PubMedID : 24906815)@armadillo repeat-containing protein, putative, expressed K08332: vacuolar protein 8
15 Sobic.009G037800 phosphoglycerate mutase, putative, expressed -
16 Sobic.004G065900 CML (Calmodulin like protein) with WRKY-binding domain(PubMedID : 31721651)@transcription factor(PubMedID : 30367619)@WRKY71, expressed -
17 Sobic.002G269300 "Phylogenetic analysis of canonical DREB1 and DREB2 genes in sorghum with those genes in maize, rice, and Arabidopsis. "(PubMedID : 24086146)@Not investigated(PubMedID : 23766026)@highly upregulated during chilling in a chilling tolerant sorghum NSG(PubMedID : 29293808)@dehydration-responsive element-binding protein, putative, expressed -
18 Sobic.006G102400 transporter family protein, putative, expressed -
19 Sobic.010G267700 receptor protein kinase CLAVATA1 precursor, putative, expressed -
20 Sobic.002G418900 expressed protein -


Gene co-expression network
sample Sobic002G184600 Sobic002G184600 Sobic002G417500 Sobic002G417500 Sobic002G184600--Sobic002G417500 Sobic007G160200 Sobic007G160200 Sobic002G184600--Sobic007G160200 Sobic007G011200 Sobic007G011200 Sobic002G184600--Sobic007G011200 Sobic004G331800 Sobic004G331800 Sobic002G184600--Sobic004G331800 Sobic003G290100 Sobic003G290100 Sobic002G184600--Sobic003G290100 Sobic007G220700 Sobic007G220700 Sobic002G184600--Sobic007G220700 Sobic003G375900 Sobic003G375900 Sobic002G184600--Sobic003G375900 Sobic001G161200 Sobic001G161200 Sobic002G184600--Sobic001G161200 Sobic003G422700 Sobic003G422700 Sobic002G184600--Sobic003G422700 Sobic002G417500--Sobic002G184600 Sobic002G417500--Sobic004G331800 Sobic002G417500--Sobic003G422700 Sobic003G424400 Sobic003G424400 Sobic002G417500--Sobic003G424400 Sobic010G265800 Sobic010G265800 Sobic002G417500--Sobic010G265800 Sobic006G197800 Sobic006G197800 Sobic002G417500--Sobic006G197800 Sobic002G417500--Sobic003G290100 Sobic007G124100 Sobic007G124100 Sobic002G417500--Sobic007G124100 Sobic009G028500 Sobic009G028500 Sobic002G417500--Sobic009G028500 Sobic007G140900 Sobic007G140900 Sobic007G160200--Sobic007G140900 Sobic004G332100 Sobic004G332100 Sobic007G160200--Sobic004G332100 Sobic001G087700 Sobic001G087700 Sobic007G160200--Sobic001G087700 Sobic009G037800 Sobic009G037800 Sobic007G160200--Sobic009G037800 Sobic001G391300 Sobic001G391300 Sobic007G160200--Sobic001G391300 Sobic007G160200--Sobic002G184600 Sobic001G523200 Sobic001G523200 Sobic007G160200--Sobic001G523200 Sobic003G238000 Sobic003G238000 Sobic007G160200--Sobic003G238000 Sobic009G195800 Sobic009G195800 Sobic007G160200--Sobic009G195800 Sobic007G011200--Sobic009G037800 Sobic004G086800 Sobic004G086800 Sobic007G011200--Sobic004G086800 Sobic006G210300 Sobic006G210300 Sobic007G011200--Sobic006G210300 Sobic004G323600 Sobic004G323600 Sobic007G011200--Sobic004G323600 Sobic002G207300 Sobic002G207300 Sobic007G011200--Sobic002G207300 Sobic007G011200--Sobic002G184600 Sobic002G323900 Sobic002G323900 Sobic007G011200--Sobic002G323900 Sobic002G418900 Sobic002G418900 Sobic007G011200--Sobic002G418900 Sobic003G416500 Sobic003G416500 Sobic007G011200--Sobic003G416500 Sobic003G369500 Sobic003G369500 Sobic004G331800--Sobic003G369500 Sobic004G331800--Sobic002G417500 Sobic004G331800--Sobic004G086800 Sobic001G285000 Sobic001G285000 Sobic004G331800--Sobic001G285000 Sobic002G138700 Sobic002G138700 Sobic004G331800--Sobic002G138700 Sobic001G410100 Sobic001G410100 Sobic004G331800--Sobic001G410100 Sobic004G331800--Sobic002G207300 Sobic009G149200 Sobic009G149200 Sobic004G331800--Sobic009G149200 Sobic003G425200 Sobic003G425200 Sobic004G331800--Sobic003G425200 Sobic006G130800 Sobic006G130800 Sobic003G290100--Sobic006G130800 Sobic010G156000 Sobic010G156000 Sobic003G290100--Sobic010G156000 Sobic003G162000 Sobic003G162000 Sobic003G290100--Sobic003G162000 Sobic003G141000 Sobic003G141000 Sobic003G290100--Sobic003G141000 Sobic001G541100 Sobic001G541100 Sobic003G290100--Sobic001G541100 Sobic005G026100 Sobic005G026100 Sobic003G290100--Sobic005G026100 Sobic006G027000 Sobic006G027000 Sobic003G290100--Sobic006G027000 Sobic003G403500 Sobic003G403500 Sobic003G290100--Sobic003G403500 Sobic001G339500 Sobic001G339500 Sobic003G290100--Sobic001G339500 Sobic001G024500 Sobic001G024500 Sobic007G220700--Sobic001G024500 Sobic010G128000 Sobic010G128000 Sobic007G220700--Sobic010G128000 Sobic001G435500 Sobic001G435500 Sobic007G220700--Sobic001G435500 Sobic010G179800 Sobic010G179800 Sobic007G220700--Sobic010G179800 Sobic008G002700 Sobic008G002700 Sobic007G220700--Sobic008G002700 Sobic005G099700 Sobic005G099700 Sobic007G220700--Sobic005G099700 Sobic003G163700 Sobic003G163700 Sobic007G220700--Sobic003G163700 Sobic007G090475 Sobic007G090475 Sobic007G220700--Sobic007G090475 Sobic001G260850 Sobic001G260850 Sobic007G220700--Sobic001G260850 Sobic001G414000 Sobic001G414000 Sobic003G375900--Sobic001G414000 Sobic003G375900--Sobic003G403500 Sobic001G525900 Sobic001G525900 Sobic003G375900--Sobic001G525900 Sobic006G164300 Sobic006G164300 Sobic003G375900--Sobic006G164300 Sobic002G257100 Sobic002G257100 Sobic003G375900--Sobic002G257100 Sobic001G314900 Sobic001G314900 Sobic003G375900--Sobic001G314900 Sobic001G121100 Sobic001G121100 Sobic003G375900--Sobic001G121100 Sobic003G262900 Sobic003G262900 Sobic003G375900--Sobic003G262900 Sobic010G267700 Sobic010G267700 Sobic003G375900--Sobic010G267700 Sobic001G118900 Sobic001G118900 Sobic001G161200--Sobic001G118900 Sobic006G205200 Sobic006G205200 Sobic001G161200--Sobic006G205200 Sobic001G161200--Sobic002G207300 Sobic004G065900 Sobic004G065900 Sobic001G161200--Sobic004G065900 Sobic003G131500 Sobic003G131500 Sobic001G161200--Sobic003G131500 Sobic001G095750 Sobic001G095750 Sobic001G161200--Sobic001G095750 Sobic001G216300 Sobic001G216300 Sobic001G161200--Sobic001G216300 Sobic002G367900 Sobic002G367900 Sobic001G161200--Sobic002G367900 Sobic001G041500 Sobic001G041500 Sobic001G161200--Sobic001G041500 Sobic001G351100 Sobic001G351100 Sobic003G422700--Sobic001G351100 Sobic003G422700--Sobic009G028500 Sobic003G422700--Sobic003G403500 Sobic006G042200 Sobic006G042200 Sobic003G422700--Sobic006G042200 Sobic004G281300 Sobic004G281300 Sobic003G422700--Sobic004G281300 Sobic003G422700--Sobic003G424400 Sobic001G034300 Sobic001G034300 Sobic003G422700--Sobic001G034300 Sobic009G195300 Sobic009G195300 Sobic003G422700--Sobic009G195300 Sobic008G125600 Sobic008G125600 Sobic003G422700--Sobic008G125600
Octagon: transcription factors


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