Gene annotation
Transcriptome id Sobic.004G315600.1
Synonym Sb04g034720
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
oxidoreductase/ transition metal ion binding protein, putative, expressed
UniProt C5XTJ6
Pfam -
Panther DB PTHR33306 PTHR33306:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G31940 : -
RAP-DB (Rice) LOC_Os02g53510.1 : oxidoreductase/ transition metal ion binding protein, putative, expressed
MaizeGDB (Corn) Zm00025a022296
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.004G315600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G183101 - -
2 Sobic.010G026500 Up-reguralion under drought(PubMedID : 24916767)@expressed protein -
3 Sobic.009G231200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@protein of unknown function DUF1421 domain containing protein, expressed -
4 Sobic.001G523200 CBL-interacting protein kinase 9(PubMedID : 26465154)@CBL-interacting protein kinase 9(PubMedID : 26465154)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.15 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
5 Sobic.010G260300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
6 Sobic.010G182700 ras-related protein, putative, expressed K07936: GTP-binding nuclear protein Ran
7 Sobic.001G426800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RNA recognition motif containing protein, expressed -
8 Sobic.009G195800 Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.25 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K07198: PRKAA, 5'-AMP-activated protein kinase, catalytic alpha subunit
9 Sobic.003G397500 expressed protein -
10 Sobic.003G238000 ras-related protein, putative, expressed K07936: GTP-binding nuclear protein Ran
11 Sobic.004G211900 "Significantly enhanced the expression levels by drought stress, up-regulated by silicon application under drought stress "(PubMedID : 24813726)@S-adenosyl-l-methionine decarboxylase leader peptide, putative, expressed K01611: speD, S-adenosylmethionine decarboxylase
12 Sobic.010G272200 leucine zipper protein-like, putative, expressed -
13 Sobic.004G031600 cyclin-T1-1, putative, expressed K15188: cyclin T
14 Sobic.004G059900 bZIP transcription factor domain containing protein, expressed -
15 Sobic.007G124200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@uncharacterized glycosyl hydrolase Rv2006/MT2062, putative, expressed K01087: trehalose 6-phosphate phosphatase
16 Sobic.002G397600 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@protein phosphatase 2C, putative, expressed -
17 Sobic.002G189000 homeobox associated leucine zipper, putative, expressed K09338: homeobox-leucine zipper protein
18 Sobic.010G217532 - -
19 Sobic.003G036600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@myb-related transcription activator, putative, expressed -
20 Sobic.004G155150 - -


Gene co-expression network
sample Sobic004G315600 Sobic004G315600 Sobic009G183101 Sobic009G183101 Sobic004G315600--Sobic009G183101 Sobic010G026500 Sobic010G026500 Sobic004G315600--Sobic010G026500 Sobic009G231200 Sobic009G231200 Sobic004G315600--Sobic009G231200 Sobic001G523200 Sobic001G523200 Sobic004G315600--Sobic001G523200 Sobic010G260300 Sobic010G260300 Sobic004G315600--Sobic010G260300 Sobic010G182700 Sobic010G182700 Sobic004G315600--Sobic010G182700 Sobic001G426800 Sobic001G426800 Sobic004G315600--Sobic001G426800 Sobic009G195800 Sobic009G195800 Sobic004G315600--Sobic009G195800 Sobic003G397500 Sobic003G397500 Sobic004G315600--Sobic003G397500 Sobic009G183101--Sobic001G426800 Sobic009G069300 Sobic009G069300 Sobic009G183101--Sobic009G069300 Sobic004G276200 Sobic004G276200 Sobic009G183101--Sobic004G276200 Sobic009G183101--Sobic004G315600 Sobic002G417300 Sobic002G417300 Sobic009G183101--Sobic002G417300 Sobic003G339700 Sobic003G339700 Sobic009G183101--Sobic003G339700 Sobic004G323400 Sobic004G323400 Sobic009G183101--Sobic004G323400 Sobic009G183101--Sobic009G195800 Sobic010G090301 Sobic010G090301 Sobic009G183101--Sobic010G090301 Sobic010G026500--Sobic003G397500 Sobic008G075600 Sobic008G075600 Sobic010G026500--Sobic008G075600 Sobic009G064400 Sobic009G064400 Sobic010G026500--Sobic009G064400 Sobic010G217532 Sobic010G217532 Sobic010G026500--Sobic010G217532 Sobic010G026500--Sobic004G315600 Sobic003G252400 Sobic003G252400 Sobic010G026500--Sobic003G252400 Sobic008G059000 Sobic008G059000 Sobic010G026500--Sobic008G059000 Sobic002G037400 Sobic002G037400 Sobic010G026500--Sobic002G037400 Sobic008G058900 Sobic008G058900 Sobic010G026500--Sobic008G058900 Sobic004G031600 Sobic004G031600 Sobic009G231200--Sobic004G031600 Sobic002G293300 Sobic002G293300 Sobic009G231200--Sobic002G293300 Sobic010G052800 Sobic010G052800 Sobic009G231200--Sobic010G052800 Sobic009G180500 Sobic009G180500 Sobic009G231200--Sobic009G180500 Sobic001G082900 Sobic001G082900 Sobic009G231200--Sobic001G082900 Sobic009G200800 Sobic009G200800 Sobic009G231200--Sobic009G200800 Sobic001G333600 Sobic001G333600 Sobic009G231200--Sobic001G333600 Sobic005G026100 Sobic005G026100 Sobic009G231200--Sobic005G026100 Sobic001G031600 Sobic001G031600 Sobic009G231200--Sobic001G031600 Sobic001G523200--Sobic009G195800 Sobic003G238000 Sobic003G238000 Sobic001G523200--Sobic003G238000 Sobic006G267900 Sobic006G267900 Sobic001G523200--Sobic006G267900 Sobic001G523200--Sobic002G293300 Sobic002G189000 Sobic002G189000 Sobic001G523200--Sobic002G189000 Sobic001G523200--Sobic004G315600 Sobic001G523200--Sobic010G260300 Sobic001G436000 Sobic001G436000 Sobic001G523200--Sobic001G436000 Sobic001G523200--Sobic009G183101 Sobic010G260300--Sobic002G189000 Sobic003G229000 Sobic003G229000 Sobic010G260300--Sobic003G229000 Sobic009G183000 Sobic009G183000 Sobic010G260300--Sobic009G183000 Sobic007G025800 Sobic007G025800 Sobic010G260300--Sobic007G025800 Sobic002G271100 Sobic002G271100 Sobic010G260300--Sobic002G271100 Sobic003G225900 Sobic003G225900 Sobic010G260300--Sobic003G225900 Sobic004G155150 Sobic004G155150 Sobic010G260300--Sobic004G155150 Sobic003G233900 Sobic003G233900 Sobic010G260300--Sobic003G233900 Sobic003G198150 Sobic003G198150 Sobic010G260300--Sobic003G198150 Sobic010G182700--Sobic004G315600 Sobic010G182700--Sobic009G183101 Sobic009G099200 Sobic009G099200 Sobic010G182700--Sobic009G099200 Sobic010G182700--Sobic010G026500 Sobic009G179600 Sobic009G179600 Sobic010G182700--Sobic009G179600 Sobic009G000801 Sobic009G000801 Sobic010G182700--Sobic009G000801 Sobic004G259000 Sobic004G259000 Sobic010G182700--Sobic004G259000 Sobic010G071600 Sobic010G071600 Sobic010G182700--Sobic010G071600 Sobic010G182700--Sobic009G069300 Sobic001G426800--Sobic009G183101 Sobic001G426800--Sobic009G069300 Sobic001G426800--Sobic003G339700 Sobic001G426800--Sobic009G180500 Sobic001G426800--Sobic004G276200 Sobic001G426800--Sobic009G200800 Sobic006G150400 Sobic006G150400 Sobic001G426800--Sobic006G150400 Sobic001G426800--Sobic004G323400 Sobic003G313900 Sobic003G313900 Sobic001G426800--Sobic003G313900 Sobic003G066900 Sobic003G066900 Sobic009G195800--Sobic003G066900 Sobic009G195800--Sobic003G233900 Sobic004G283201 Sobic004G283201 Sobic009G195800--Sobic004G283201 Sobic003G373150 Sobic003G373150 Sobic009G195800--Sobic003G373150 Sobic009G195800--Sobic006G267900 Sobic004G285100 Sobic004G285100 Sobic009G195800--Sobic004G285100 Sobic009G195800--Sobic010G260300 Sobic009G195800--Sobic002G189000 Sobic004G283300 Sobic004G283300 Sobic009G195800--Sobic004G283300 Sobic003G397500--Sobic003G252400 Sobic003G397500--Sobic008G075600 Sobic004G211301 Sobic004G211301 Sobic003G397500--Sobic004G211301 Sobic002G331450 Sobic002G331450 Sobic003G397500--Sobic002G331450 Sobic003G397500--Sobic010G026500 Sobic002G110200 Sobic002G110200 Sobic003G397500--Sobic002G110200 Sobic002G229600 Sobic002G229600 Sobic003G397500--Sobic002G229600 Sobic008G031300 Sobic008G031300 Sobic003G397500--Sobic008G031300 Sobic010G085400 Sobic010G085400 Sobic003G397500--Sobic010G085400
Octagon: transcription factors


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