Gene annotation
Transcriptome id Sobic.010G272200.1
Synonym EXO70F1, Sb10g030670, ATEXO70F1
Functional annotation leucine zipper protein-like, putative, expressed
UniProt A0A194YLW7
Pfam PF03081
Panther DB PTHR12542 PTHR12542:SF40
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006887; exocytosis GO:0000145exocyst


Orthologs (automatic annotation)
TAIR AT5G50380 : exocyst subunit exo70 family protein F1
RAP-DB (Rice) LOC_Os05g30640.1 : leucine zipper protein-like, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G409300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@phosphatidylinositol transfer protein alpha isoform, putative, expressed -
2 Sobic.008G059100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@amino acid transporter, putative, expressed -
3 Sobic.003G036600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@myb-related transcription activator, putative, expressed -
4 Sobic.006G150400 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
5 Sobic.009G190700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@jacalin-like lectin domain containing protein, expressed -
6 Sobic.003G397500 expressed protein -
7 Sobic.010G260300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
8 Sobic.001G426800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RNA recognition motif containing protein, expressed -
9 Sobic.007G131700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@endonuclease/exonuclease/phosphatase family domain containing protein, expressed -
10 Sobic.005G209500 expressed protein -
11 Sobic.004G315600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oxidoreductase/ transition metal ion binding protein, putative, expressed -
12 Sobic.004G211900 "Significantly enhanced the expression levels by drought stress, up-regulated by silicon application under drought stress "(PubMedID : 24813726)@S-adenosyl-l-methionine decarboxylase leader peptide, putative, expressed K01611: speD, S-adenosylmethionine decarboxylase
13 Sobic.007G124200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@uncharacterized glycosyl hydrolase Rv2006/MT2062, putative, expressed K01087: trehalose 6-phosphate phosphatase
14 Sobic.006G258800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@immutans protein, putative, expressed K17893: AOX1, ubiquinol oxidase
15 Sobic.006G220300 - -
16 Sobic.003G252400 drought induced 19 protein, putative, expressed -
17 Sobic.002G148700 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@heavy metal transport/detoxification protein, putative, expressed -
18 Sobic.001G521500 callose synthase-like enzyme(PubMedID : 25311645)@1,3-beta-glucan synthase component domain containing protein, expressed K11000: callose synthase
19 Sobic.003G302800 Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.25 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K07198: PRKAA, 5'-AMP-activated protein kinase, catalytic alpha subunit
20 Sobic.007G025800 amino acid transporter, putative, expressed -


Gene co-expression network
sample Sobic010G272200 Sobic010G272200 Sobic001G409300 Sobic001G409300 Sobic010G272200--Sobic001G409300 Sobic008G059100 Sobic008G059100 Sobic010G272200--Sobic008G059100 Sobic003G036600 Sobic003G036600 Sobic010G272200--Sobic003G036600 Sobic006G150400 Sobic006G150400 Sobic010G272200--Sobic006G150400 Sobic009G190700 Sobic009G190700 Sobic010G272200--Sobic009G190700 Sobic003G397500 Sobic003G397500 Sobic010G272200--Sobic003G397500 Sobic010G260300 Sobic010G260300 Sobic010G272200--Sobic010G260300 Sobic001G426800 Sobic001G426800 Sobic010G272200--Sobic001G426800 Sobic007G131700 Sobic007G131700 Sobic010G272200--Sobic007G131700 Sobic001G409300--Sobic008G059100 Sobic004G211900 Sobic004G211900 Sobic001G409300--Sobic004G211900 Sobic003G242000 Sobic003G242000 Sobic001G409300--Sobic003G242000 Sobic001G217400 Sobic001G217400 Sobic001G409300--Sobic001G217400 Sobic001G409300--Sobic010G272200 Sobic003G051600 Sobic003G051600 Sobic001G409300--Sobic003G051600 Sobic003G269800 Sobic003G269800 Sobic001G409300--Sobic003G269800 Sobic001G409300--Sobic003G397500 Sobic009G136100 Sobic009G136100 Sobic001G409300--Sobic009G136100 Sobic001G488700 Sobic001G488700 Sobic008G059100--Sobic001G488700 Sobic002G187700 Sobic002G187700 Sobic008G059100--Sobic002G187700 Sobic008G059100--Sobic001G409300 Sobic001G481900 Sobic001G481900 Sobic008G059100--Sobic001G481900 Sobic004G233200 Sobic004G233200 Sobic008G059100--Sobic004G233200 Sobic003G302800 Sobic003G302800 Sobic008G059100--Sobic003G302800 Sobic008G059100--Sobic009G190700 Sobic007G164000 Sobic007G164000 Sobic008G059100--Sobic007G164000 Sobic010G262500 Sobic010G262500 Sobic008G059100--Sobic010G262500 Sobic002G148700 Sobic002G148700 Sobic003G036600--Sobic002G148700 Sobic005G087900 Sobic005G087900 Sobic003G036600--Sobic005G087900 Sobic001G521500 Sobic001G521500 Sobic003G036600--Sobic001G521500 Sobic003G036600--Sobic010G260300 Sobic009G079300 Sobic009G079300 Sobic003G036600--Sobic009G079300 Sobic003G036600--Sobic003G397500 Sobic003G036600--Sobic001G409300 Sobic003G252400 Sobic003G252400 Sobic003G036600--Sobic003G252400 Sobic002G229600 Sobic002G229600 Sobic003G036600--Sobic002G229600 Sobic003G339700 Sobic003G339700 Sobic006G150400--Sobic003G339700 Sobic006G150400--Sobic001G426800 Sobic009G066900 Sobic009G066900 Sobic006G150400--Sobic009G066900 Sobic006G150400--Sobic010G272200 Sobic009G069300 Sobic009G069300 Sobic006G150400--Sobic009G069300 Sobic001G391300 Sobic001G391300 Sobic006G150400--Sobic001G391300 Sobic009G183101 Sobic009G183101 Sobic006G150400--Sobic009G183101 Sobic006G150400--Sobic003G036600 Sobic004G276200 Sobic004G276200 Sobic006G150400--Sobic004G276200 Sobic009G190700--Sobic008G059100 Sobic003G313900 Sobic003G313900 Sobic009G190700--Sobic003G313900 Sobic009G190700--Sobic007G164000 Sobic003G354900 Sobic003G354900 Sobic009G190700--Sobic003G354900 Sobic009G190700--Sobic001G409300 Sobic003G051000 Sobic003G051000 Sobic009G190700--Sobic003G051000 Sobic009G190700--Sobic002G187700 Sobic001G070000 Sobic001G070000 Sobic009G190700--Sobic001G070000 Sobic009G190700--Sobic003G242000 Sobic003G397500--Sobic003G252400 Sobic008G075600 Sobic008G075600 Sobic003G397500--Sobic008G075600 Sobic004G211301 Sobic004G211301 Sobic003G397500--Sobic004G211301 Sobic002G331450 Sobic002G331450 Sobic003G397500--Sobic002G331450 Sobic010G026500 Sobic010G026500 Sobic003G397500--Sobic010G026500 Sobic002G110200 Sobic002G110200 Sobic003G397500--Sobic002G110200 Sobic003G397500--Sobic002G229600 Sobic008G031300 Sobic008G031300 Sobic003G397500--Sobic008G031300 Sobic010G085400 Sobic010G085400 Sobic003G397500--Sobic010G085400 Sobic002G189000 Sobic002G189000 Sobic010G260300--Sobic002G189000 Sobic003G229000 Sobic003G229000 Sobic010G260300--Sobic003G229000 Sobic009G183000 Sobic009G183000 Sobic010G260300--Sobic009G183000 Sobic007G025800 Sobic007G025800 Sobic010G260300--Sobic007G025800 Sobic002G271100 Sobic002G271100 Sobic010G260300--Sobic002G271100 Sobic003G225900 Sobic003G225900 Sobic010G260300--Sobic003G225900 Sobic004G155150 Sobic004G155150 Sobic010G260300--Sobic004G155150 Sobic003G233900 Sobic003G233900 Sobic010G260300--Sobic003G233900 Sobic003G198150 Sobic003G198150 Sobic010G260300--Sobic003G198150 Sobic001G426800--Sobic009G183101 Sobic001G426800--Sobic009G069300 Sobic001G426800--Sobic003G339700 Sobic009G180500 Sobic009G180500 Sobic001G426800--Sobic009G180500 Sobic001G426800--Sobic004G276200 Sobic009G200800 Sobic009G200800 Sobic001G426800--Sobic009G200800 Sobic001G426800--Sobic006G150400 Sobic004G323400 Sobic004G323400 Sobic001G426800--Sobic004G323400 Sobic001G426800--Sobic003G313900 Sobic007G131700--Sobic003G252400 Sobic006G115300 Sobic006G115300 Sobic007G131700--Sobic006G115300 Sobic007G131700--Sobic002G110200 Sobic007G131700--Sobic003G229000 Sobic007G131700--Sobic002G189000 Sobic007G131700--Sobic007G025800 Sobic007G131700--Sobic010G260300 Sobic002G013900 Sobic002G013900 Sobic007G131700--Sobic002G013900 Sobic007G131700--Sobic002G331450
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.