Gene annotation
Transcriptome id Sobic.009G190700.4,Sobic.009G190700.3,Sobic.009G190700.1
Synonym Sb09g024950
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
jacalin-like lectin domain containing protein, expressed
UniProt C5Z0S3
Pfam PF01419
Panther DB PTHR23244 PTHR23244:SF249
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G19715 : Mannose-binding lectin superfamily protein
RAP-DB (Rice) LOC_Os05g43240.3 : jacalin-like lectin domain containing protein, expressed
MaizeGDB (Corn) Zm00025a044170
Brachypodium KQK05511
Barley HORVU1Hr1G075520.1 , HORVU1Hr1G075520.2 , HORVU1Hr1G075520.3 , HORVU1Hr1G075520.4
Wheat TraesCS1D02G327100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G059100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@amino acid transporter, putative, expressed -
2 Sobic.003G313900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@jacalin-like lectin domain containing protein, expressed -
3 Sobic.007G164000 ABC transporter, ATP-binding protein, putative, expressed K06185: ATP-binding cassette, subfamily F, member 2
4 Sobic.003G354900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@regulator of chromosome condensation, putative, expressed -
5 Sobic.001G409300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@phosphatidylinositol transfer protein alpha isoform, putative, expressed -
6 Sobic.003G051000 expressed protein -
7 Sobic.002G187700 expressed protein -
8 Sobic.001G070000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@actin-depolymerizing factor, putative, expressed K05765: cofilin
9 Sobic.003G242000 AMP-binding enzyme, putative, expressed K01897: ACSL, long-chain acyl-CoA synthetase
10 Sobic.001G406100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@mitochondrial carrier protein, putative, expressed K15100: SLC25A1, solute carrier family 25 (mitochondrial citrate transporter), member 1
11 Sobic.001G352400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
12 Sobic.003G302800 Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.25 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K07198: PRKAA, 5'-AMP-activated protein kinase, catalytic alpha subunit
13 Sobic.004G169000 digalactosyldiacylglycerol synthase, chloroplast precursor, putative, expressed K09480: digalactosyldiacylglycerol synthase
14 Sobic.001G498000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@tyrosine protein kinase domain containing protein, putative, expressed -
15 Sobic.006G135600 Up-regulated by silicon application under drought stress (PubMedID : 24813726)@S-adenosyl-l-methionine decarboxylase leader peptide, putative, expressed K01611: speD, S-adenosylmethionine decarboxylase
16 Sobic.010G019000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@uncharacterized membrane protein, putative, expressed -
17 Sobic.010G275700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MYB family transcription factor, putative, expressed -
18 Sobic.003G021100 expressed protein -
19 Sobic.010G272200 leucine zipper protein-like, putative, expressed -
20 Sobic.006G175800 acyl-CoA thioesterase 2, putative, expressed K01068: acyl-coenzyme A thioesterase 1/2/4


Gene co-expression network
sample Sobic009G190700 Sobic009G190700 Sobic008G059100 Sobic008G059100 Sobic009G190700--Sobic008G059100 Sobic003G313900 Sobic003G313900 Sobic009G190700--Sobic003G313900 Sobic007G164000 Sobic007G164000 Sobic009G190700--Sobic007G164000 Sobic003G354900 Sobic003G354900 Sobic009G190700--Sobic003G354900 Sobic001G409300 Sobic001G409300 Sobic009G190700--Sobic001G409300 Sobic003G051000 Sobic003G051000 Sobic009G190700--Sobic003G051000 Sobic002G187700 Sobic002G187700 Sobic009G190700--Sobic002G187700 Sobic001G070000 Sobic001G070000 Sobic009G190700--Sobic001G070000 Sobic003G242000 Sobic003G242000 Sobic009G190700--Sobic003G242000 Sobic001G488700 Sobic001G488700 Sobic008G059100--Sobic001G488700 Sobic008G059100--Sobic002G187700 Sobic008G059100--Sobic001G409300 Sobic001G481900 Sobic001G481900 Sobic008G059100--Sobic001G481900 Sobic004G233200 Sobic004G233200 Sobic008G059100--Sobic004G233200 Sobic003G302800 Sobic003G302800 Sobic008G059100--Sobic003G302800 Sobic008G059100--Sobic009G190700 Sobic008G059100--Sobic007G164000 Sobic010G262500 Sobic010G262500 Sobic008G059100--Sobic010G262500 Sobic001G292000 Sobic001G292000 Sobic003G313900--Sobic001G292000 Sobic006G066800 Sobic006G066800 Sobic003G313900--Sobic006G066800 Sobic001G498000 Sobic001G498000 Sobic003G313900--Sobic001G498000 Sobic003G313900--Sobic009G190700 Sobic002G381700 Sobic002G381700 Sobic003G313900--Sobic002G381700 Sobic004G323400 Sobic004G323400 Sobic003G313900--Sobic004G323400 Sobic002G417300 Sobic002G417300 Sobic003G313900--Sobic002G417300 Sobic003G339700 Sobic003G339700 Sobic003G313900--Sobic003G339700 Sobic008G187100 Sobic008G187100 Sobic003G313900--Sobic008G187100 Sobic007G164000--Sobic003G051000 Sobic007G164000--Sobic002G187700 Sobic007G164000--Sobic001G481900 Sobic003G190400 Sobic003G190400 Sobic007G164000--Sobic003G190400 Sobic001G128300 Sobic001G128300 Sobic007G164000--Sobic001G128300 Sobic007G164000--Sobic008G059100 Sobic003G198800 Sobic003G198800 Sobic007G164000--Sobic003G198800 Sobic001G390200 Sobic001G390200 Sobic007G164000--Sobic001G390200 Sobic001G057700 Sobic001G057700 Sobic007G164000--Sobic001G057700 Sobic001G446200 Sobic001G446200 Sobic003G354900--Sobic001G446200 Sobic003G425500 Sobic003G425500 Sobic003G354900--Sobic003G425500 Sobic003G354900--Sobic009G190700 Sobic010G019000 Sobic010G019000 Sobic003G354900--Sobic010G019000 Sobic003G354900--Sobic001G390200 Sobic001G352400 Sobic001G352400 Sobic003G354900--Sobic001G352400 Sobic001G391300 Sobic001G391300 Sobic003G354900--Sobic001G391300 Sobic004G219400 Sobic004G219400 Sobic003G354900--Sobic004G219400 Sobic008G152600 Sobic008G152600 Sobic003G354900--Sobic008G152600 Sobic001G409300--Sobic008G059100 Sobic004G211900 Sobic004G211900 Sobic001G409300--Sobic004G211900 Sobic001G409300--Sobic003G242000 Sobic001G217400 Sobic001G217400 Sobic001G409300--Sobic001G217400 Sobic010G272200 Sobic010G272200 Sobic001G409300--Sobic010G272200 Sobic003G051600 Sobic003G051600 Sobic001G409300--Sobic003G051600 Sobic003G269800 Sobic003G269800 Sobic001G409300--Sobic003G269800 Sobic003G397500 Sobic003G397500 Sobic001G409300--Sobic003G397500 Sobic009G136100 Sobic009G136100 Sobic001G409300--Sobic009G136100 Sobic003G051000--Sobic007G164000 Sobic003G051000--Sobic001G057700 Sobic004G169000 Sobic004G169000 Sobic003G051000--Sobic004G169000 Sobic005G084800 Sobic005G084800 Sobic003G051000--Sobic005G084800 Sobic010G236300 Sobic010G236300 Sobic003G051000--Sobic010G236300 Sobic003G051000--Sobic001G498000 Sobic003G043300 Sobic003G043300 Sobic003G051000--Sobic003G043300 Sobic003G051000--Sobic002G187700 Sobic003G355900 Sobic003G355900 Sobic003G051000--Sobic003G355900 Sobic002G187700--Sobic001G481900 Sobic004G306500 Sobic004G306500 Sobic002G187700--Sobic004G306500 Sobic002G187700--Sobic008G059100 Sobic002G187700--Sobic003G198800 Sobic002G187700--Sobic001G488700 Sobic003G115900 Sobic003G115900 Sobic002G187700--Sobic003G115900 Sobic006G002300 Sobic006G002300 Sobic002G187700--Sobic006G002300 Sobic002G187700--Sobic003G190400 Sobic002G187700--Sobic004G169000 Sobic001G406100 Sobic001G406100 Sobic001G070000--Sobic001G406100 Sobic010G116400 Sobic010G116400 Sobic001G070000--Sobic010G116400 Sobic008G047400 Sobic008G047400 Sobic001G070000--Sobic008G047400 Sobic006G090500 Sobic006G090500 Sobic001G070000--Sobic006G090500 Sobic003G243600 Sobic003G243600 Sobic001G070000--Sobic003G243600 Sobic001G070000--Sobic008G059100 Sobic003G403700 Sobic003G403700 Sobic001G070000--Sobic003G403700 Sobic001G185500 Sobic001G185500 Sobic001G070000--Sobic001G185500 Sobic001G476700 Sobic001G476700 Sobic001G070000--Sobic001G476700 Sobic003G242000--Sobic003G198800 Sobic002G262300 Sobic002G262300 Sobic003G242000--Sobic002G262300 Sobic003G242000--Sobic003G115900 Sobic002G383600 Sobic002G383600 Sobic003G242000--Sobic002G383600 Sobic001G064200 Sobic001G064200 Sobic003G242000--Sobic001G064200 Sobic003G242000--Sobic008G152600 Sobic003G242000--Sobic001G409300 Sobic003G242000--Sobic008G059100 Sobic003G242000--Sobic006G002300
Octagon: transcription factors


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