Gene annotation
Transcriptome id Sobic.007G124200.1
Synonym Sb07g020100
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
uncharacterized glycosyl hydrolase Rv2006/MT2062, putative, expressed
UniProt C5YKT8
Pfam PF02358
Panther DB PTHR10788 PTHR10788:SF36
NCBI CDD -
KEGG Orthology K01087; trehalose 6-phosphate phosphatase
Gene Ontology GO:0005992; trehalose biosynthetic process GO:0003824catalytic activity


Orthologs (automatic annotation)
TAIR AT5G65140 : Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
RAP-DB (Rice) LOC_Os08g31630.1 : uncharacterized glycosyl hydrolase Rv2006/MT2062, putative, expressed
MaizeGDB (Corn) Zm00025a022126 , Zm00025a046718 , Zm00025a006067 , Zm00025a015246 , Zm00025a013816 , Zm00025a048809 , Zm00025a002697 , Zm00025a033170 , Zm00025a048808
Brachypodium KQK18917 , KQJ90023 , KQJ98224 , KQK21468 , KQK01866
Barley HORVU6Hr1G074960.8 , HORVU6Hr1G074960.9 , HORVU6Hr1G074960.4 , HORVU6Hr1G074960.5 , HORVU6Hr1G074960.6 , HORVU6Hr1G074960.7 , HORVU6Hr1G074960.2 , HORVU6Hr1G074960.3 , HORVU6Hr1G066240.1 , HORVU6Hr1G074960.21 , HORVU6Hr1G074960.20 , HORVU1Hr1G061580.3 , HORVU1Hr1G061580.2 , HORVU1Hr1G061580.4 , HORVU5Hr1G058300.5 , HORVU5Hr1G058300.4 , HORVU5Hr1G058300.6 , HORVU5Hr1G058300.1 , HORVU5Hr1G058300.3 , HORVU5Hr1G058300.2 , HORVU6Hr1G074960.18 , HORVU6Hr1G074960.19 , HORVU6Hr1G074960.16 , HORVU6Hr1G074960.17 , HORVU6Hr1G074960.14 , HORVU6Hr1G074960.12 , HORVU6Hr1G074960.13 , HORVU6Hr1G074960.10 , HORVU6Hr1G074960.11
Wheat TraesCS5B02G193100 , TraesCS5B02G193100 , TraesCS5B02G193100 , TraesCS6D02G230500 , TraesCS6B02G276300 , TraesCS6B02G330900 , TraesCS6B02G330900 , TraesCS5A02G190000 , TraesCS7B02G085800 , TraesCS6B02G330900 , TraesCS6A02G248400 , TraesCS5D02G200800 , TraesCS7D02G182600 , TraesCS6A02G301800 , TraesCS6D02G281100
Populus -


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cDNA sequences
Sobic.007G124200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G103200 DNA binding protein, putative, expressed -
2 Sobic.001G516100 protein kinase family protein, putative, expressed K14500: BR-signaling kinase
3 Sobic.008G059100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@amino acid transporter, putative, expressed -
4 Sobic.010G026500 Up-reguralion under drought(PubMedID : 24916767)@expressed protein -
5 Sobic.001G350900 OsFBO14 - F-box and other domain containing protein, expressed -
6 Sobic.008G047400 OsFBT14 - F-box and tubby domain containing protein, expressed -
7 Sobic.003G367300 actin, putative, expressed K10355: actin, other eukaryote
8 Sobic.003G036600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@myb-related transcription activator, putative, expressed -
9 Sobic.001G409300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@phosphatidylinositol transfer protein alpha isoform, putative, expressed -
10 Sobic.001G414500 ankyrin repeat-containing protein, putative, expressed -
11 Sobic.003G397500 expressed protein -
12 Sobic.005G197600 NBS-LRR disease resistance protein, putative, expressed -
13 Sobic.003G126300 OsRhmbd2 - Putative Rhomboid homologue, expressed -
14 Sobic.006G163900 homeobox associated leucine zipper, putative, expressed -
15 Sobic.003G309200 expressed protein K12617: PATL1, DNA topoisomerase 2-associated protein PAT1
16 Sobic.010G272200 leucine zipper protein-like, putative, expressed -
17 Sobic.010G217532 - -
18 Sobic.004G031600 cyclin-T1-1, putative, expressed K15188: cyclin T
19 Sobic.004G271700 ADP-ribosylation factor, putative, expressed K07977: Arf/Sar family, other
20 Sobic.004G309600 ABA signaling component(PubMedID : 24151305)@"Central regulator in ABA signaling, biosynthesis, and drought resistance in rice"(PubMedID : 30367619)@bZIP transcription factor, putative, expressed K14432: ABA responsive element binding factor


Gene co-expression network
sample Sobic007G124200 Sobic007G124200 Sobic001G103200 Sobic001G103200 Sobic007G124200--Sobic001G103200 Sobic001G516100 Sobic001G516100 Sobic007G124200--Sobic001G516100 Sobic008G059100 Sobic008G059100 Sobic007G124200--Sobic008G059100 Sobic010G026500 Sobic010G026500 Sobic007G124200--Sobic010G026500 Sobic001G350900 Sobic001G350900 Sobic007G124200--Sobic001G350900 Sobic008G047400 Sobic008G047400 Sobic007G124200--Sobic008G047400 Sobic003G367300 Sobic003G367300 Sobic007G124200--Sobic003G367300 Sobic003G036600 Sobic003G036600 Sobic007G124200--Sobic003G036600 Sobic001G409300 Sobic001G409300 Sobic007G124200--Sobic001G409300 Sobic001G103200--Sobic001G516100 Sobic001G358300 Sobic001G358300 Sobic001G103200--Sobic001G358300 Sobic004G271700 Sobic004G271700 Sobic001G103200--Sobic004G271700 Sobic001G510700 Sobic001G510700 Sobic001G103200--Sobic001G510700 Sobic009G135100 Sobic009G135100 Sobic001G103200--Sobic009G135100 Sobic009G219900 Sobic009G219900 Sobic001G103200--Sobic009G219900 Sobic004G350300 Sobic004G350300 Sobic001G103200--Sobic004G350300 Sobic001G103200--Sobic001G350900 Sobic003G002400 Sobic003G002400 Sobic001G103200--Sobic003G002400 Sobic004G031600 Sobic004G031600 Sobic001G516100--Sobic004G031600 Sobic001G516100--Sobic001G103200 Sobic001G516100--Sobic003G367300 Sobic001G516100--Sobic004G271700 Sobic002G330300 Sobic002G330300 Sobic001G516100--Sobic002G330300 Sobic002G293300 Sobic002G293300 Sobic001G516100--Sobic002G293300 Sobic001G541100 Sobic001G541100 Sobic001G516100--Sobic001G541100 Sobic001G516100--Sobic003G002400 Sobic004G274400 Sobic004G274400 Sobic001G516100--Sobic004G274400 Sobic001G488700 Sobic001G488700 Sobic008G059100--Sobic001G488700 Sobic002G187700 Sobic002G187700 Sobic008G059100--Sobic002G187700 Sobic008G059100--Sobic001G409300 Sobic001G481900 Sobic001G481900 Sobic008G059100--Sobic001G481900 Sobic004G233200 Sobic004G233200 Sobic008G059100--Sobic004G233200 Sobic003G302800 Sobic003G302800 Sobic008G059100--Sobic003G302800 Sobic009G190700 Sobic009G190700 Sobic008G059100--Sobic009G190700 Sobic007G164000 Sobic007G164000 Sobic008G059100--Sobic007G164000 Sobic010G262500 Sobic010G262500 Sobic008G059100--Sobic010G262500 Sobic003G397500 Sobic003G397500 Sobic010G026500--Sobic003G397500 Sobic008G075600 Sobic008G075600 Sobic010G026500--Sobic008G075600 Sobic009G064400 Sobic009G064400 Sobic010G026500--Sobic009G064400 Sobic010G217532 Sobic010G217532 Sobic010G026500--Sobic010G217532 Sobic004G315600 Sobic004G315600 Sobic010G026500--Sobic004G315600 Sobic003G252400 Sobic003G252400 Sobic010G026500--Sobic003G252400 Sobic008G059000 Sobic008G059000 Sobic010G026500--Sobic008G059000 Sobic002G037400 Sobic002G037400 Sobic010G026500--Sobic002G037400 Sobic008G058900 Sobic008G058900 Sobic010G026500--Sobic008G058900 Sobic004G211900 Sobic004G211900 Sobic001G350900--Sobic004G211900 Sobic001G217400 Sobic001G217400 Sobic001G350900--Sobic001G217400 Sobic004G211866 Sobic004G211866 Sobic001G350900--Sobic004G211866 Sobic006G033200 Sobic006G033200 Sobic001G350900--Sobic006G033200 Sobic001G350900--Sobic008G047400 Sobic002G217400 Sobic002G217400 Sobic001G350900--Sobic002G217400 Sobic001G350900--Sobic001G103200 Sobic001G350900--Sobic001G541100 Sobic001G414500 Sobic001G414500 Sobic001G350900--Sobic001G414500 Sobic008G124900 Sobic008G124900 Sobic008G047400--Sobic008G124900 Sobic010G278200 Sobic010G278200 Sobic008G047400--Sobic010G278200 Sobic008G047400--Sobic006G033200 Sobic004G202500 Sobic004G202500 Sobic008G047400--Sobic004G202500 Sobic003G302900 Sobic003G302900 Sobic008G047400--Sobic003G302900 Sobic010G074300 Sobic010G074300 Sobic008G047400--Sobic010G074300 Sobic004G255700 Sobic004G255700 Sobic008G047400--Sobic004G255700 Sobic010G147100 Sobic010G147100 Sobic008G047400--Sobic010G147100 Sobic003G309200 Sobic003G309200 Sobic008G047400--Sobic003G309200 Sobic003G367300--Sobic002G293300 Sobic003G367300--Sobic001G516100 Sobic001G434900 Sobic001G434900 Sobic003G367300--Sobic001G434900 Sobic007G006600 Sobic007G006600 Sobic003G367300--Sobic007G006600 Sobic003G367300--Sobic004G271700 Sobic009G079300 Sobic009G079300 Sobic003G367300--Sobic009G079300 Sobic001G436000 Sobic001G436000 Sobic003G367300--Sobic001G436000 Sobic003G367300--Sobic003G002400 Sobic001G162100 Sobic001G162100 Sobic003G367300--Sobic001G162100 Sobic002G148700 Sobic002G148700 Sobic003G036600--Sobic002G148700 Sobic005G087900 Sobic005G087900 Sobic003G036600--Sobic005G087900 Sobic001G521500 Sobic001G521500 Sobic003G036600--Sobic001G521500 Sobic010G260300 Sobic010G260300 Sobic003G036600--Sobic010G260300 Sobic003G036600--Sobic009G079300 Sobic003G036600--Sobic003G397500 Sobic003G036600--Sobic001G409300 Sobic003G036600--Sobic003G252400 Sobic002G229600 Sobic002G229600 Sobic003G036600--Sobic002G229600 Sobic001G409300--Sobic008G059100 Sobic001G409300--Sobic004G211900 Sobic003G242000 Sobic003G242000 Sobic001G409300--Sobic003G242000 Sobic001G409300--Sobic001G217400 Sobic010G272200 Sobic010G272200 Sobic001G409300--Sobic010G272200 Sobic003G051600 Sobic003G051600 Sobic001G409300--Sobic003G051600 Sobic003G269800 Sobic003G269800 Sobic001G409300--Sobic003G269800 Sobic001G409300--Sobic003G397500 Sobic009G136100 Sobic009G136100 Sobic001G409300--Sobic009G136100
Octagon: transcription factors


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