Gene annotation
Transcriptome id Sobic.005G197600.3,Sobic.005G197600.2,Sobic.005G197600.1
Synonym
Functional annotation NBS-LRR disease resistance protein, putative, expressed
UniProt A0A1Z5RJR7 , A0A1Z5RKJ3 , A0A1Z5RJK3
Pfam PF00560 PF00931 PF00560 PF12799 PF00931
Panther DB PTHR23155 PTHR23155:SF482
NCBI CDD KOG4658; Apoptotic ATPase
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT1G69550 : disease resistance protein (TIR-NBS-LRR class)
RAP-DB (Rice) LOC_Os11g10550.1,LOC_Os08g16460.1 : NBS-LRR disease resistance protein, putative, expressed
MaizeGDB (Corn) Zm00025a029251
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G124200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@uncharacterized glycosyl hydrolase Rv2006/MT2062, putative, expressed K01087: trehalose 6-phosphate phosphatase
2 Sobic.008G058900 amino acid transporter, putative, expressed -
3 Sobic.003G363200 ZOS1-17 - C2H2 zinc finger protein, expressed -
4 Sobic.001G092000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
5 Sobic.008G059000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@amino acid transporter, putative, expressed -
6 Sobic.009G169400 expressed protein -
7 Sobic.002G355200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@BTBN16 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 domain, expressed -
8 Sobic.010G026500 Up-reguralion under drought(PubMedID : 24916767)@expressed protein -
9 Sobic.010G217532 - -
10 Sobic.007G169200 EF hand family protein, putative, expressed K13448: calcium-binding protein CML
11 Sobic.001G304500 scarecrow, putative, expressed -
12 Sobic.004G271700 ADP-ribosylation factor, putative, expressed K07977: Arf/Sar family, other
13 Sobic.001G028000 expressed protein -
14 Sobic.004G222800 expressed protein -
15 Sobic.003G281900 regulator of chromosome condensation, putative, expressed -
16 Sobic.001G147200 DNA-binding protein-like, putative, expressed K10624: E3 ubiquitin-protein ligase RBBP6
17 Sobic.010G201200 expressed protein -
18 Sobic.008G115500 syntaxin, putative, expressed K08486: syntaxin 1B/2/3
19 Sobic.004G236550 - -
20 Sobic.004G170700 Trihelix Family(PubMedID : 24864043)@homeodomain, putative, expressed -


Gene co-expression network
sample Sobic005G197600 Sobic005G197600 Sobic007G124200 Sobic007G124200 Sobic005G197600--Sobic007G124200 Sobic008G058900 Sobic008G058900 Sobic005G197600--Sobic008G058900 Sobic003G363200 Sobic003G363200 Sobic005G197600--Sobic003G363200 Sobic001G092000 Sobic001G092000 Sobic005G197600--Sobic001G092000 Sobic008G059000 Sobic008G059000 Sobic005G197600--Sobic008G059000 Sobic009G169400 Sobic009G169400 Sobic005G197600--Sobic009G169400 Sobic002G355200 Sobic002G355200 Sobic005G197600--Sobic002G355200 Sobic010G026500 Sobic010G026500 Sobic005G197600--Sobic010G026500 Sobic010G217532 Sobic010G217532 Sobic005G197600--Sobic010G217532 Sobic001G103200 Sobic001G103200 Sobic007G124200--Sobic001G103200 Sobic001G516100 Sobic001G516100 Sobic007G124200--Sobic001G516100 Sobic008G059100 Sobic008G059100 Sobic007G124200--Sobic008G059100 Sobic007G124200--Sobic010G026500 Sobic001G350900 Sobic001G350900 Sobic007G124200--Sobic001G350900 Sobic008G047400 Sobic008G047400 Sobic007G124200--Sobic008G047400 Sobic003G367300 Sobic003G367300 Sobic007G124200--Sobic003G367300 Sobic003G036600 Sobic003G036600 Sobic007G124200--Sobic003G036600 Sobic001G409300 Sobic001G409300 Sobic007G124200--Sobic001G409300 Sobic008G058900--Sobic008G059000 Sobic009G167000 Sobic009G167000 Sobic008G058900--Sobic009G167000 Sobic010G201200 Sobic010G201200 Sobic008G058900--Sobic010G201200 Sobic009G076500 Sobic009G076500 Sobic008G058900--Sobic009G076500 Sobic009G076700 Sobic009G076700 Sobic008G058900--Sobic009G076700 Sobic004G244100 Sobic004G244100 Sobic008G058900--Sobic004G244100 Sobic002G021300 Sobic002G021300 Sobic008G058900--Sobic002G021300 Sobic009G068900 Sobic009G068900 Sobic008G058900--Sobic009G068900 Sobic007G073750 Sobic007G073750 Sobic008G058900--Sobic007G073750 Sobic005G139700 Sobic005G139700 Sobic003G363200--Sobic005G139700 Sobic010G200700 Sobic010G200700 Sobic003G363200--Sobic010G200700 Sobic003G431000 Sobic003G431000 Sobic003G363200--Sobic003G431000 Sobic002G219200 Sobic002G219200 Sobic003G363200--Sobic002G219200 Sobic001G028000 Sobic001G028000 Sobic003G363200--Sobic001G028000 Sobic001G290400 Sobic001G290400 Sobic003G363200--Sobic001G290400 Sobic004G297200 Sobic004G297200 Sobic003G363200--Sobic004G297200 Sobic006G078400 Sobic006G078400 Sobic003G363200--Sobic006G078400 Sobic010G245800 Sobic010G245800 Sobic003G363200--Sobic010G245800 Sobic002G274800 Sobic002G274800 Sobic001G092000--Sobic002G274800 Sobic001G092000--Sobic001G409300 Sobic003G252300 Sobic003G252300 Sobic001G092000--Sobic003G252300 Sobic001G235500 Sobic001G235500 Sobic001G092000--Sobic001G235500 Sobic006G146100 Sobic006G146100 Sobic001G092000--Sobic006G146100 Sobic006G125400 Sobic006G125400 Sobic001G092000--Sobic006G125400 Sobic003G281900 Sobic003G281900 Sobic001G092000--Sobic003G281900 Sobic001G217400 Sobic001G217400 Sobic001G092000--Sobic001G217400 Sobic003G269800 Sobic003G269800 Sobic001G092000--Sobic003G269800 Sobic004G281200 Sobic004G281200 Sobic008G059000--Sobic004G281200 Sobic008G059000--Sobic008G058900 Sobic008G059000--Sobic002G021300 Sobic003G087100 Sobic003G087100 Sobic008G059000--Sobic003G087100 Sobic006G194600 Sobic006G194600 Sobic008G059000--Sobic006G194600 Sobic008G059000--Sobic009G167000 Sobic008G059000--Sobic004G244100 Sobic008G059000--Sobic009G076500 Sobic010G016500 Sobic010G016500 Sobic008G059000--Sobic010G016500 Sobic006G207900 Sobic006G207900 Sobic009G169400--Sobic006G207900 Sobic007G169200 Sobic007G169200 Sobic009G169400--Sobic007G169200 Sobic004G162200 Sobic004G162200 Sobic009G169400--Sobic004G162200 Sobic004G278000 Sobic004G278000 Sobic009G169400--Sobic004G278000 Sobic002G197600 Sobic002G197600 Sobic009G169400--Sobic002G197600 Sobic001G122500 Sobic001G122500 Sobic009G169400--Sobic001G122500 Sobic009G169400--Sobic008G059000 Sobic004G176900 Sobic004G176900 Sobic009G169400--Sobic004G176900 Sobic009G169400--Sobic004G244100 Sobic001G151800 Sobic001G151800 Sobic002G355200--Sobic001G151800 Sobic008G144500 Sobic008G144500 Sobic002G355200--Sobic008G144500 Sobic009G236200 Sobic009G236200 Sobic002G355200--Sobic009G236200 Sobic007G125900 Sobic007G125900 Sobic002G355200--Sobic007G125900 Sobic004G236550 Sobic004G236550 Sobic002G355200--Sobic004G236550 Sobic005G016800 Sobic005G016800 Sobic002G355200--Sobic005G016800 Sobic009G236300 Sobic009G236300 Sobic002G355200--Sobic009G236300 Sobic010G016400 Sobic010G016400 Sobic002G355200--Sobic010G016400 Sobic006G119200 Sobic006G119200 Sobic002G355200--Sobic006G119200 Sobic003G397500 Sobic003G397500 Sobic010G026500--Sobic003G397500 Sobic008G075600 Sobic008G075600 Sobic010G026500--Sobic008G075600 Sobic009G064400 Sobic009G064400 Sobic010G026500--Sobic009G064400 Sobic010G026500--Sobic010G217532 Sobic004G315600 Sobic004G315600 Sobic010G026500--Sobic004G315600 Sobic003G252400 Sobic003G252400 Sobic010G026500--Sobic003G252400 Sobic010G026500--Sobic008G059000 Sobic002G037400 Sobic002G037400 Sobic010G026500--Sobic002G037400 Sobic010G026500--Sobic008G058900 Sobic010G217532--Sobic010G026500 Sobic003G181201 Sobic003G181201 Sobic010G217532--Sobic003G181201 Sobic001G284475 Sobic001G284475 Sobic010G217532--Sobic001G284475 Sobic001G082900 Sobic001G082900 Sobic010G217532--Sobic001G082900 Sobic010G217532--Sobic008G059000 Sobic009G231200 Sobic009G231200 Sobic010G217532--Sobic009G231200 Sobic010G217532--Sobic007G124200 Sobic003G251400 Sobic003G251400 Sobic010G217532--Sobic003G251400 Sobic010G217532--Sobic008G075600
Octagon: transcription factors


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