Gene annotation
Transcriptome id Sobic.004G222800.2,Sobic.004G222800.3,Sobic.004G222800.1,Sobic.004G222800.4
Synonym Sb04g026730
Functional annotation expressed protein
UniProt A0A1Z5RPI9 , A0A194YS71
Pfam PF12579
Panther DB PTHR14000 PTHR14000:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G60670 : Protein of unknown function (DUF3755)
RAP-DB (Rice) LOC_Os02g42020.2,LOC_Os02g42020.1 : expressed protein
MaizeGDB (Corn) Zm00025a021073 , Zm00025a032058
Brachypodium KQK00437 , KQK00438
Barley -
Wheat TraesCS6A02G221600 , TraesCS6B02G259500 , TraesCS6D02G213500 , TraesCS6D02G213500 , TraesCS6A02G221600 , TraesCS6D02G213500 , TraesCS6A02G221600
Populus -


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cDNA sequences
Sobic.004G222800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G294200 transmembrane 9 superfamily member, putative, expressed K17086: transmembrane 9 superfamily member 2/4
2 Sobic.004G132300 lysine ketoglutarate reductase trans-splicing related 1, putative, expressed -
3 Sobic.004G274400 GCN5-related N-acetyltransferase, putative, expressed -
4 Sobic.006G064800 heparan-alpha-glucosaminide N-acetyltransferase, putative, expressed -
5 Sobic.001G049200 AMP-binding enzyme, putative, expressed -
6 Sobic.002G242500 Expressed in older stem(PubMedID : 28649278)@WRKY90, expressed K18835: WRKY transcription factor 2
7 Sobic.010G161450 - -
8 Sobic.010G064600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@LIM domain-containing protein, putative, expressed -
9 Sobic.003G167500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@heavy metal-associated domain containing protein, expressed -
10 Sobic.006G217700 gamma-soluble NSF attachment protein, putative, expressed -
11 Sobic.009G139800 rab GDP dissociation inhibitor alpha, putative, expressed K17255: Rab GDP dissociation inhibitor
12 Sobic.001G386400 phospholipid-transporting ATPase, putative, expressed K14802: DRS2, phospholipid-transporting ATPase
13 Sobic.010G016400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@peroxisomal biogenesis factor 11, putative, expressed -
14 Sobic.005G195600 adenylyl-sulfate kinase, putative, expressed K00860: adenylylsulfate kinase
15 Sobic.001G358300 SNARE associated Golgi protein, putative, expressed -
16 Sobic.004G170700 Trihelix Family(PubMedID : 24864043)@homeodomain, putative, expressed -
17 Sobic.004G350300 No apical meristem protein, putative, expressed -
18 Sobic.002G355200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@BTBN16 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 domain, expressed -
19 Sobic.009G167700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@NLI interacting factor-like phosphatase, putative, expressed K15731: carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase
20 Sobic.003G316300 insulin-degrading enzyme, putative, expressed K01408: IDE, insulysin


Gene co-expression network
sample Sobic004G222800 Sobic004G222800 Sobic002G294200 Sobic002G294200 Sobic004G222800--Sobic002G294200 Sobic004G132300 Sobic004G132300 Sobic004G222800--Sobic004G132300 Sobic004G274400 Sobic004G274400 Sobic004G222800--Sobic004G274400 Sobic006G064800 Sobic006G064800 Sobic004G222800--Sobic006G064800 Sobic001G049200 Sobic001G049200 Sobic004G222800--Sobic001G049200 Sobic002G242500 Sobic002G242500 Sobic004G222800--Sobic002G242500 Sobic010G161450 Sobic010G161450 Sobic004G222800--Sobic010G161450 Sobic010G064600 Sobic010G064600 Sobic004G222800--Sobic010G064600 Sobic003G167500 Sobic003G167500 Sobic004G222800--Sobic003G167500 Sobic002G294200--Sobic002G242500 Sobic002G294200--Sobic004G274400 Sobic009G179200 Sobic009G179200 Sobic002G294200--Sobic009G179200 Sobic001G283200 Sobic001G283200 Sobic002G294200--Sobic001G283200 Sobic006G176600 Sobic006G176600 Sobic002G294200--Sobic006G176600 Sobic006G148200 Sobic006G148200 Sobic002G294200--Sobic006G148200 Sobic010G193900 Sobic010G193900 Sobic002G294200--Sobic010G193900 Sobic006G281800 Sobic006G281800 Sobic002G294200--Sobic006G281800 Sobic002G294200--Sobic010G064600 Sobic004G132300--Sobic001G283200 Sobic001G033500 Sobic001G033500 Sobic004G132300--Sobic001G033500 Sobic006G217700 Sobic006G217700 Sobic004G132300--Sobic006G217700 Sobic001G206900 Sobic001G206900 Sobic004G132300--Sobic001G206900 Sobic004G132300--Sobic006G148200 Sobic001G237500 Sobic001G237500 Sobic004G132300--Sobic001G237500 Sobic004G132300--Sobic002G294200 Sobic004G132300--Sobic004G274400 Sobic006G034000 Sobic006G034000 Sobic004G132300--Sobic006G034000 Sobic004G274400--Sobic006G148200 Sobic001G323000 Sobic001G323000 Sobic004G274400--Sobic001G323000 Sobic006G225600 Sobic006G225600 Sobic004G274400--Sobic006G225600 Sobic003G002400 Sobic003G002400 Sobic004G274400--Sobic003G002400 Sobic009G219000 Sobic009G219000 Sobic004G274400--Sobic009G219000 Sobic002G131900 Sobic002G131900 Sobic004G274400--Sobic002G131900 Sobic003G312200 Sobic003G312200 Sobic004G274400--Sobic003G312200 Sobic004G274400--Sobic001G206900 Sobic003G007500 Sobic003G007500 Sobic004G274400--Sobic003G007500 Sobic006G087900 Sobic006G087900 Sobic006G064800--Sobic006G087900 Sobic005G195600 Sobic005G195600 Sobic006G064800--Sobic005G195600 Sobic003G374700 Sobic003G374700 Sobic006G064800--Sobic003G374700 Sobic002G362900 Sobic002G362900 Sobic006G064800--Sobic002G362900 Sobic006G064800--Sobic010G161450 Sobic001G012800 Sobic001G012800 Sobic006G064800--Sobic001G012800 Sobic001G051800 Sobic001G051800 Sobic006G064800--Sobic001G051800 Sobic010G236500 Sobic010G236500 Sobic006G064800--Sobic010G236500 Sobic009G073000 Sobic009G073000 Sobic006G064800--Sobic009G073000 Sobic001G049200--Sobic009G179200 Sobic002G114800 Sobic002G114800 Sobic001G049200--Sobic002G114800 Sobic001G049200--Sobic010G161450 Sobic001G049200--Sobic002G242500 Sobic007G221100 Sobic007G221100 Sobic001G049200--Sobic007G221100 Sobic001G049200--Sobic002G294200 Sobic001G049200--Sobic004G132300 Sobic001G049200--Sobic006G176600 Sobic007G098400 Sobic007G098400 Sobic001G049200--Sobic007G098400 Sobic002G242500--Sobic002G294200 Sobic002G242500--Sobic007G098400 Sobic004G145200 Sobic004G145200 Sobic002G242500--Sobic004G145200 Sobic003G049300 Sobic003G049300 Sobic002G242500--Sobic003G049300 Sobic002G242500--Sobic001G049200 Sobic002G242500--Sobic003G167500 Sobic002G242500--Sobic007G221100 Sobic001G403700 Sobic001G403700 Sobic002G242500--Sobic001G403700 Sobic005G211400 Sobic005G211400 Sobic002G242500--Sobic005G211400 Sobic010G220600 Sobic010G220600 Sobic010G161450--Sobic010G220600 Sobic010G161450--Sobic001G049200 Sobic001G386400 Sobic001G386400 Sobic010G161450--Sobic001G386400 Sobic010G161450--Sobic006G064800 Sobic003G273700 Sobic003G273700 Sobic010G161450--Sobic003G273700 Sobic010G161450--Sobic002G242500 Sobic007G136100 Sobic007G136100 Sobic010G161450--Sobic007G136100 Sobic010G161450--Sobic003G167500 Sobic010G161450--Sobic007G221100 Sobic003G087000 Sobic003G087000 Sobic010G064600--Sobic003G087000 Sobic008G093000 Sobic008G093000 Sobic010G064600--Sobic008G093000 Sobic010G261600 Sobic010G261600 Sobic010G064600--Sobic010G261600 Sobic004G228800 Sobic004G228800 Sobic010G064600--Sobic004G228800 Sobic010G184300 Sobic010G184300 Sobic010G064600--Sobic010G184300 Sobic010G064600--Sobic006G281800 Sobic009G072700 Sobic009G072700 Sobic010G064600--Sobic009G072700 Sobic001G089800 Sobic001G089800 Sobic010G064600--Sobic001G089800 Sobic001G003000 Sobic001G003000 Sobic010G064600--Sobic001G003000 Sobic003G167500--Sobic002G242500 Sobic001G196300 Sobic001G196300 Sobic003G167500--Sobic001G196300 Sobic009G236200 Sobic009G236200 Sobic003G167500--Sobic009G236200 Sobic002G355200 Sobic002G355200 Sobic003G167500--Sobic002G355200 Sobic009G167700 Sobic009G167700 Sobic003G167500--Sobic009G167700 Sobic001G010400 Sobic001G010400 Sobic003G167500--Sobic001G010400 Sobic003G167500--Sobic001G049200 Sobic003G167500--Sobic010G161450 Sobic010G016400 Sobic010G016400 Sobic003G167500--Sobic010G016400
Octagon: transcription factors


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