Gene annotation
Transcriptome id Sobic.001G153200.1
Synonym Sb01g013300
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
expressed protein
UniProt A0A1B6QJ35
Pfam PF10358
Panther DB PTHR31182 PTHR31182:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G11760 : -
RAP-DB (Rice) LOC_Os03g44670.1 : expressed protein
MaizeGDB (Corn) Zm00025a006409 , Zm00025a007599 , Zm00025a006410
Brachypodium KQK13959
Barley HORVU5Hr1G092510.8 , HORVU5Hr1G092510.9 , HORVU5Hr1G092510.2 , HORVU5Hr1G092510.3 , HORVU5Hr1G092510.5 , HORVU5Hr1G092510.1 , HORVU5Hr1G092510.6 , HORVU5Hr1G092510.7 , HORVU5Hr1G092510.4 , HORVU5Hr1G092510.10 , HORVU5Hr1G092510.11
Wheat TraesCS5B02G373900 , TraesCS5A02G371800 , TraesCS5D02G381300
Populus -


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cDNA sequences
Sobic.001G153200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G394400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
2 Sobic.003G034700 phosphofructokinase 3(PubMedID : 26465154)@6-phosphofructokinase, putative, expressed K00850: pfkA, 6-phosphofructokinase 1
3 Sobic.002G215100 exo70 exocyst complex subunit, putative, expressed K07195: EXOC7, exocyst complex component 7
4 Sobic.001G421300 protein kinase APK1A, chloroplast precursor, putative, expressed -
5 Sobic.010G193300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@lipid phosphatase protein, putative, expressed -
6 Sobic.001G472600 gibberellin response modulator protein, putative, expressed -
7 Sobic.004G146800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@spotted leaf 11, putative, expressed -
8 Sobic.003G269200 expressed protein -
9 Sobic.001G463000 syntaxin 6, N-terminal domain containing protein, expressed -
10 Sobic.010G097600 OsLIM - LIM domain protein, putative actin-binding protein and transcription factor, expressed -
11 Sobic.001G083800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cyclic nucleotide-gated ion channel 2, putative, expressed K05391: cyclic nucleotide gated channel, plant
12 Sobic.003G119800 Expressed in older stem(PubMedID : 28649278)@no apical meristem protein, putative, expressed -
13 Sobic.001G421900 SCARECROW, putative, expressed -
14 Sobic.002G400200 CS domain containing protein, putative, expressed -
15 Sobic.003G389700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
16 Sobic.009G231200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@protein of unknown function DUF1421 domain containing protein, expressed -
17 Sobic.003G278500 RING finger and CHY zinc finger domain-containing protein 1, putative, expressed K10144: RCHY1, RING finger and CHY zinc finger domain-containing protein 1
18 Sobic.007G006900 shwachman-Bodian-Diamond syndrome protein, putative, expressed K14574: SDO1, ribosome maturation protein SDO1
19 Sobic.001G333600 membrane-anchored ubiquitin-fold protein, putative, expressed -
20 Sobic.001G122832 - K13414: mitogen-activated protein kinase kinase kinase 1


Gene co-expression network
sample Sobic001G153200 Sobic001G153200 Sobic002G394400 Sobic002G394400 Sobic001G153200--Sobic002G394400 Sobic003G034700 Sobic003G034700 Sobic001G153200--Sobic003G034700 Sobic002G215100 Sobic002G215100 Sobic001G153200--Sobic002G215100 Sobic001G421300 Sobic001G421300 Sobic001G153200--Sobic001G421300 Sobic010G193300 Sobic010G193300 Sobic001G153200--Sobic010G193300 Sobic001G472600 Sobic001G472600 Sobic001G153200--Sobic001G472600 Sobic004G146800 Sobic004G146800 Sobic001G153200--Sobic004G146800 Sobic003G269200 Sobic003G269200 Sobic001G153200--Sobic003G269200 Sobic001G463000 Sobic001G463000 Sobic001G153200--Sobic001G463000 Sobic002G394400--Sobic001G153200 Sobic001G207700 Sobic001G207700 Sobic002G394400--Sobic001G207700 Sobic002G394400--Sobic001G463000 Sobic003G389700 Sobic003G389700 Sobic002G394400--Sobic003G389700 Sobic002G394400--Sobic001G421300 Sobic001G421900 Sobic001G421900 Sobic002G394400--Sobic001G421900 Sobic002G294500 Sobic002G294500 Sobic002G394400--Sobic002G294500 Sobic002G394400--Sobic001G472600 Sobic002G394400--Sobic003G269200 Sobic003G034700--Sobic001G153200 Sobic010G174500 Sobic010G174500 Sobic003G034700--Sobic010G174500 Sobic005G209500 Sobic005G209500 Sobic003G034700--Sobic005G209500 Sobic002G130800 Sobic002G130800 Sobic003G034700--Sobic002G130800 Sobic007G006900 Sobic007G006900 Sobic003G034700--Sobic007G006900 Sobic003G034700--Sobic001G463000 Sobic003G076500 Sobic003G076500 Sobic003G034700--Sobic003G076500 Sobic001G541100 Sobic001G541100 Sobic003G034700--Sobic001G541100 Sobic001G082900 Sobic001G082900 Sobic003G034700--Sobic001G082900 Sobic010G101800 Sobic010G101800 Sobic002G215100--Sobic010G101800 Sobic007G132400 Sobic007G132400 Sobic002G215100--Sobic007G132400 Sobic002G310200 Sobic002G310200 Sobic002G215100--Sobic002G310200 Sobic007G104800 Sobic007G104800 Sobic002G215100--Sobic007G104800 Sobic006G195700 Sobic006G195700 Sobic002G215100--Sobic006G195700 Sobic009G056800 Sobic009G056800 Sobic002G215100--Sobic009G056800 Sobic010G028800 Sobic010G028800 Sobic002G215100--Sobic010G028800 Sobic007G118200 Sobic007G118200 Sobic002G215100--Sobic007G118200 Sobic001G409600 Sobic001G409600 Sobic002G215100--Sobic001G409600 Sobic001G421300--Sobic001G472600 Sobic001G351700 Sobic001G351700 Sobic001G421300--Sobic001G351700 Sobic009G259400 Sobic009G259400 Sobic001G421300--Sobic009G259400 Sobic001G421300--Sobic002G215100 Sobic009G205200 Sobic009G205200 Sobic001G421300--Sobic009G205200 Sobic003G345400 Sobic003G345400 Sobic001G421300--Sobic003G345400 Sobic001G186800 Sobic001G186800 Sobic001G421300--Sobic001G186800 Sobic004G121100 Sobic004G121100 Sobic001G421300--Sobic004G121100 Sobic006G258500 Sobic006G258500 Sobic001G421300--Sobic006G258500 Sobic009G157500 Sobic009G157500 Sobic010G193300--Sobic009G157500 Sobic007G145200 Sobic007G145200 Sobic010G193300--Sobic007G145200 Sobic010G193300--Sobic001G153200 Sobic010G097600 Sobic010G097600 Sobic010G193300--Sobic010G097600 Sobic010G193300--Sobic001G351700 Sobic010G193300--Sobic006G258500 Sobic003G278500 Sobic003G278500 Sobic010G193300--Sobic003G278500 Sobic001G446900 Sobic001G446900 Sobic010G193300--Sobic001G446900 Sobic008G013600 Sobic008G013600 Sobic010G193300--Sobic008G013600 Sobic007G019800 Sobic007G019800 Sobic001G472600--Sobic007G019800 Sobic001G472600--Sobic002G215100 Sobic001G472600--Sobic001G421300 Sobic006G109300 Sobic006G109300 Sobic001G472600--Sobic006G109300 Sobic002G262600 Sobic002G262600 Sobic001G472600--Sobic002G262600 Sobic001G472600--Sobic003G345400 Sobic001G472600--Sobic004G146800 Sobic003G084700 Sobic003G084700 Sobic001G472600--Sobic003G084700 Sobic003G119800 Sobic003G119800 Sobic001G472600--Sobic003G119800 Sobic004G146800--Sobic001G421900 Sobic001G425800 Sobic001G425800 Sobic004G146800--Sobic001G425800 Sobic001G358000 Sobic001G358000 Sobic004G146800--Sobic001G358000 Sobic004G146800--Sobic001G472600 Sobic005G026100 Sobic005G026100 Sobic004G146800--Sobic005G026100 Sobic010G249100 Sobic010G249100 Sobic004G146800--Sobic010G249100 Sobic009G165800 Sobic009G165800 Sobic004G146800--Sobic009G165800 Sobic004G146800--Sobic007G019800 Sobic006G209400 Sobic006G209400 Sobic004G146800--Sobic006G209400 Sobic003G269200--Sobic002G215100 Sobic003G269200--Sobic003G119800 Sobic003G341400 Sobic003G341400 Sobic003G269200--Sobic003G341400 Sobic003G269200--Sobic001G153200 Sobic008G189400 Sobic008G189400 Sobic003G269200--Sobic008G189400 Sobic003G269200--Sobic001G421300 Sobic009G219000 Sobic009G219000 Sobic003G269200--Sobic009G219000 Sobic003G269200--Sobic001G425800 Sobic001G427300 Sobic001G427300 Sobic003G269200--Sobic001G427300 Sobic001G463000--Sobic003G119800 Sobic004G031600 Sobic004G031600 Sobic001G463000--Sobic004G031600 Sobic001G463000--Sobic001G541100 Sobic001G463000--Sobic009G219000 Sobic009G138100 Sobic009G138100 Sobic001G463000--Sobic009G138100 Sobic004G274400 Sobic004G274400 Sobic001G463000--Sobic004G274400 Sobic003G361500 Sobic003G361500 Sobic001G463000--Sobic003G361500 Sobic001G516100 Sobic001G516100 Sobic001G463000--Sobic001G516100 Sobic001G463000--Sobic002G394400
Octagon: transcription factors


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