Gene annotation
Transcriptome id Sobic.003G034700.1
Synonym Sb03g003140, PFK3
Functional annotation phosphofructokinase 3 (PubMedID : 26465154)
6-phosphofructokinase, putative, expressed
UniProt C5XLZ0
Pfam PF00365
Panther DB PTHR13697 PTHR13697:SF31
NCBI CDD -
KEGG Orthology K00850; pfkA, 6-phosphofructokinase 1
Gene Ontology GO:0006096; glycolytic process GO:00038726-phosphofructokinase activity


Orthologs (automatic annotation)
TAIR AT4G26270 : phosphofructokinase 3
RAP-DB (Rice) LOC_Os01g09570.1 : 6-phosphofructokinase, putative, expressed
MaizeGDB (Corn) Zm00025a037532 , Zm00025a023048 , Zm00025a035801
Brachypodium KQK03126 , KQK07133
Barley HORVU3Hr1G019580.8 , HORVU3Hr1G019580.9 , HORVU3Hr1G019580.2 , HORVU3Hr1G019580.3 , HORVU3Hr1G019580.1 , HORVU3Hr1G019580.6 , HORVU3Hr1G019580.7 , HORVU3Hr1G019580.4 , HORVU3Hr1G019580.5 , HORVU3Hr1G019580.18 , HORVU3Hr1G019580.19 , HORVU3Hr1G019580.10 , HORVU3Hr1G019580.11 , HORVU3Hr1G019580.12 , HORVU3Hr1G019580.13 , HORVU3Hr1G019580.14 , HORVU3Hr1G019580.15 , HORVU3Hr1G019580.16 , HORVU3Hr1G019580.17
Wheat TraesCS3A02G107600 , TraesCS3B02G126400 , TraesCS3D02G109600
Populus -


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cDNA sequences
Sobic.003G034700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G153200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
2 Sobic.010G174500 protein kinase family protein, putative, expressed -
3 Sobic.005G209500 expressed protein -
4 Sobic.002G130800 potassium transporter, putative, expressed K03549: KUP system potassium uptake protein
5 Sobic.007G006900 shwachman-Bodian-Diamond syndrome protein, putative, expressed K14574: SDO1, ribosome maturation protein SDO1
6 Sobic.001G463000 syntaxin 6, N-terminal domain containing protein, expressed -
7 Sobic.003G076500 MYB family transcription factor, putative, expressed -
8 Sobic.001G541100 signal recognition particle receptor, putative, expressed K13431: signal recognition particle receptor subunit alpha
9 Sobic.001G082900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF1336 domain containing protein, expressed -
10 Sobic.001G333600 membrane-anchored ubiquitin-fold protein, putative, expressed -
11 Sobic.001G421300 protein kinase APK1A, chloroplast precursor, putative, expressed -
12 Sobic.008G047400 OsFBT14 - F-box and tubby domain containing protein, expressed -
13 Sobic.001G351700 calmodulin-binding transcription activator, putative, expressed -
14 Sobic.006G092400 calmodulin binding protein, putative, expressed -
15 Sobic.001G328200 interferon-related developmental regulator, putative, expressed -
16 Sobic.004G146800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@spotted leaf 11, putative, expressed -
17 Sobic.003G302900 transcriptional regulator family protein, putative, expressed -
18 Sobic.002G313800 Homologous to Dof genes in Arabidopsis and rice.(PubMedID : 21161392)@dof zinc finger domain containing protein, putative, expressed -
19 Sobic.004G202500 serine/threonine-protein kinase AFC2, putative, expressed K08287: dual-specificity kinase
20 Sobic.004G247000 -(PubMedID : 26976818)@"Gln-4(Ortholog in maize:Martin et al., 2006)"(PubMedID : 31659887)@glutamine synthetase, catalytic domain containing protein, expressed K01915: glnA, glutamine synthetase


Gene co-expression network
sample Sobic003G034700 Sobic003G034700 Sobic001G153200 Sobic001G153200 Sobic003G034700--Sobic001G153200 Sobic010G174500 Sobic010G174500 Sobic003G034700--Sobic010G174500 Sobic005G209500 Sobic005G209500 Sobic003G034700--Sobic005G209500 Sobic002G130800 Sobic002G130800 Sobic003G034700--Sobic002G130800 Sobic007G006900 Sobic007G006900 Sobic003G034700--Sobic007G006900 Sobic001G463000 Sobic001G463000 Sobic003G034700--Sobic001G463000 Sobic003G076500 Sobic003G076500 Sobic003G034700--Sobic003G076500 Sobic001G541100 Sobic001G541100 Sobic003G034700--Sobic001G541100 Sobic001G082900 Sobic001G082900 Sobic003G034700--Sobic001G082900 Sobic002G394400 Sobic002G394400 Sobic001G153200--Sobic002G394400 Sobic001G153200--Sobic003G034700 Sobic002G215100 Sobic002G215100 Sobic001G153200--Sobic002G215100 Sobic001G421300 Sobic001G421300 Sobic001G153200--Sobic001G421300 Sobic010G193300 Sobic010G193300 Sobic001G153200--Sobic010G193300 Sobic001G472600 Sobic001G472600 Sobic001G153200--Sobic001G472600 Sobic004G146800 Sobic004G146800 Sobic001G153200--Sobic004G146800 Sobic003G269200 Sobic003G269200 Sobic001G153200--Sobic003G269200 Sobic001G153200--Sobic001G463000 Sobic004G234900 Sobic004G234900 Sobic010G174500--Sobic004G234900 Sobic003G413500 Sobic003G413500 Sobic010G174500--Sobic003G413500 Sobic001G503300 Sobic001G503300 Sobic010G174500--Sobic001G503300 Sobic006G092400 Sobic006G092400 Sobic010G174500--Sobic006G092400 Sobic006G225600 Sobic006G225600 Sobic010G174500--Sobic006G225600 Sobic010G174500--Sobic002G130800 Sobic005G105000 Sobic005G105000 Sobic010G174500--Sobic005G105000 Sobic001G180900 Sobic001G180900 Sobic010G174500--Sobic001G180900 Sobic009G138100 Sobic009G138100 Sobic010G174500--Sobic009G138100 Sobic003G229000 Sobic003G229000 Sobic005G209500--Sobic003G229000 Sobic010G260300 Sobic010G260300 Sobic005G209500--Sobic010G260300 Sobic001G110900 Sobic001G110900 Sobic005G209500--Sobic001G110900 Sobic003G272400 Sobic003G272400 Sobic005G209500--Sobic003G272400 Sobic010G140500 Sobic010G140500 Sobic005G209500--Sobic010G140500 Sobic002G189000 Sobic002G189000 Sobic005G209500--Sobic002G189000 Sobic007G025800 Sobic007G025800 Sobic005G209500--Sobic007G025800 Sobic001G236400 Sobic001G236400 Sobic005G209500--Sobic001G236400 Sobic003G252400 Sobic003G252400 Sobic005G209500--Sobic003G252400 Sobic002G130800--Sobic006G092400 Sobic001G137100 Sobic001G137100 Sobic002G130800--Sobic001G137100 Sobic004G118200 Sobic004G118200 Sobic002G130800--Sobic004G118200 Sobic010G147100 Sobic010G147100 Sobic002G130800--Sobic010G147100 Sobic006G090500 Sobic006G090500 Sobic002G130800--Sobic006G090500 Sobic010G228400 Sobic010G228400 Sobic002G130800--Sobic010G228400 Sobic004G233200 Sobic004G233200 Sobic002G130800--Sobic004G233200 Sobic009G217100 Sobic009G217100 Sobic002G130800--Sobic009G217100 Sobic001G481900 Sobic001G481900 Sobic002G130800--Sobic001G481900 Sobic002G134600 Sobic002G134600 Sobic007G006900--Sobic002G134600 Sobic001G425800 Sobic001G425800 Sobic007G006900--Sobic001G425800 Sobic003G328600 Sobic003G328600 Sobic007G006900--Sobic003G328600 Sobic001G362200 Sobic001G362200 Sobic007G006900--Sobic001G362200 Sobic002G400200 Sobic002G400200 Sobic007G006900--Sobic002G400200 Sobic010G249100 Sobic010G249100 Sobic007G006900--Sobic010G249100 Sobic002G067600 Sobic002G067600 Sobic007G006900--Sobic002G067600 Sobic009G238850 Sobic009G238850 Sobic007G006900--Sobic009G238850 Sobic003G119800 Sobic003G119800 Sobic007G006900--Sobic003G119800 Sobic001G463000--Sobic003G119800 Sobic004G031600 Sobic004G031600 Sobic001G463000--Sobic004G031600 Sobic001G463000--Sobic001G541100 Sobic009G219000 Sobic009G219000 Sobic001G463000--Sobic009G219000 Sobic001G463000--Sobic009G138100 Sobic004G274400 Sobic004G274400 Sobic001G463000--Sobic004G274400 Sobic003G361500 Sobic003G361500 Sobic001G463000--Sobic003G361500 Sobic001G516100 Sobic001G516100 Sobic001G463000--Sobic001G516100 Sobic001G463000--Sobic002G394400 Sobic002G290400 Sobic002G290400 Sobic003G076500--Sobic002G290400 Sobic006G209400 Sobic006G209400 Sobic003G076500--Sobic006G209400 Sobic003G076500--Sobic006G092400 Sobic001G162100 Sobic001G162100 Sobic003G076500--Sobic001G162100 Sobic010G130000 Sobic010G130000 Sobic003G076500--Sobic010G130000 Sobic003G076500--Sobic001G541100 Sobic003G309200 Sobic003G309200 Sobic003G076500--Sobic003G309200 Sobic009G219900 Sobic009G219900 Sobic003G076500--Sobic009G219900 Sobic001G031600 Sobic001G031600 Sobic003G076500--Sobic001G031600 Sobic001G541100--Sobic009G219000 Sobic001G323000 Sobic001G323000 Sobic001G541100--Sobic001G323000 Sobic001G541100--Sobic009G219900 Sobic001G541100--Sobic009G138100 Sobic001G541100--Sobic006G209400 Sobic001G395400 Sobic001G395400 Sobic001G541100--Sobic001G395400 Sobic001G541100--Sobic010G130000 Sobic001G105500 Sobic001G105500 Sobic001G541100--Sobic001G105500 Sobic001G541100--Sobic002G134600 Sobic002G293300 Sobic002G293300 Sobic001G082900--Sobic002G293300 Sobic009G231200 Sobic009G231200 Sobic001G082900--Sobic009G231200 Sobic001G436000 Sobic001G436000 Sobic001G082900--Sobic001G436000 Sobic003G238000 Sobic003G238000 Sobic001G082900--Sobic003G238000 Sobic007G140900 Sobic007G140900 Sobic001G082900--Sobic007G140900 Sobic001G420100 Sobic001G420100 Sobic001G082900--Sobic001G420100 Sobic004G059900 Sobic004G059900 Sobic001G082900--Sobic004G059900 Sobic003G032900 Sobic003G032900 Sobic001G082900--Sobic003G032900 Sobic001G082900--Sobic003G034700
Octagon: transcription factors


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