Gene annotation
Transcriptome id Sobic.002G313800.1
Synonym DNA binding with One Finger, Sb02g034320, SbDof6
Functional annotation Homologous to Dof genes in Arabidopsis and rice. (PubMedID : 21161392)
dof zinc finger domain containing protein, putative, expressed
UniProt C5X9D9
Pfam PF02701
Panther DB PTHR31992 PTHR31992:SF24
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003677DNA binding


Orthologs (automatic annotation)
TAIR AT5G60200 : TARGET OF MONOPTEROS 6
RAP-DB (Rice) LOC_Os07g32510.1 : dof zinc finger domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a049197 , Zm00025a004485 , Zm00025a009285 , Zm00025a023031 , Zm00025a017356 , Zm00025a007115 , Zm00025a032602 , Zm00025a007401 , Zm00025a047370 , Zm00025a052752 , Zm00025a006464 , Zm00025a039572 , Zm00025a016727 , Zm00025a014147 , Zm00025a021740 , Zm00025a017302 , Zm00025a001854 , Zm00025a000851 , Zm00025a021884 , Zm00025a032473 , Zm00025a057389 , Zm00025a014756 , Zm00025a008288 , Zm00025a004967 , Zm00025a048181 , Zm00025a026723 , Zm00025a043793
Brachypodium KQK22335 , KQK14158 , KQK07701 , PNT73247 , KQK00955 , KQK16070 , PNT65625 , PNT65624 , KQJ98766 , PNT69485 , KQJ90639 , KQK03138 , KQK06036 , KQK14319 , KQJ86253 , KQK23432 , KQJ84092
Barley HORVU2Hr1G013060.1 , HORVU2Hr1G119160.6 , HORVU2Hr1G119160.4 , HORVU2Hr1G119160.2 , HORVU2Hr1G119160.3 , HORVU2Hr1G119160.1 , HORVU5Hr1G021290.5 , HORVU5Hr1G021290.2 , HORVU5Hr1G021290.1 , HORVU2Hr1G047750.1 , HORVU2Hr1G047750.3 , HORVU2Hr1G047750.2 , HORVU4Hr1G074990.3 , HORVU4Hr1G074990.2 , HORVU4Hr1G074990.1 , HORVU1Hr1G074140.1 , HORVU3Hr1G083460.1 , HORVU4Hr1G013890.1 , HORVU6Hr1G065250.4 , HORVU6Hr1G065250.5 , HORVU6Hr1G065250.6 , HORVU6Hr1G065250.7 , HORVU5Hr1G048700.1 , HORVU6Hr1G065250.2 , HORVU6Hr1G065250.3 , HORVU6Hr1G065250.8 , HORVU6Hr1G065250.9 , HORVU2Hr1G119110.3 , HORVU2Hr1G119110.7 , HORVU2Hr1G119110.6 , HORVU2Hr1G119110.5 , HORVU2Hr1G119110.4 , HORVU2Hr1G119110.9 , HORVU2Hr1G119110.8 , HORVU6Hr1G065250.1 , HORVU5Hr1G097620.1 , HORVU7Hr1G043250.2 , HORVU6Hr1G065250.10 , HORVU1Hr1G044560.1
Wheat TraesCS5B02G154100 , TraesCS2A02G402200 , TraesCS4B02G206800 , TraesCS2D02G563000 , TraesCS4A02G097800 , TraesCS5A02G155900 , TraesCS3B02G608900 , TraesCS4B02G286400 , TraesCS2D02G563400 , TraesCS6D02G236700 , TraesCS2D02G563200 , TraesCS6B02G301500 , TraesCS4D02G285100 , TraesCS2B02G592600 , TraesCS4D02G207600 , TraesCS5A02G078100 , TraesCS5A02G078100 , TraesCS2D02G399500 , TraesCS2B02G592900 , TraesCS2A02G590800 , TraesCS2B02G592800 , TraesCS4A02G017700 , TraesCS6A02G274000 , TraesCS2B02G592700 , TraesCS2A02G591200 , TraesCS5D02G093800 , TraesCS1B02G045000 , TraesCS1B02G045000 , TraesCS1B02G045000 , TraesCS5D02G161000 , TraesCS6D02G254200 , TraesCS5D02G093800 , TraesCS5B02G087600 , TraesCS5B02G087600 , TraesCS5B02G087600 , TraesCS6B02G270100 , TraesCS2B02G420400 , TraesCS6A02G255500
Populus PNT43441


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cDNA sequences
Sobic.002G313800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G293300 octicosapeptide/Phox/Bem1p, putative, expressed -
2 Sobic.003G367300 actin, putative, expressed K10355: actin, other eukaryote
3 Sobic.001G434900 serine palmitoyltransferase 1, putative, expressed K00654: serine palmitoyltransferase
4 Sobic.004G320800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@heat shock protein DnaJ, putative, expressed -
5 Sobic.003G002400 dnaJ domain containing protein, expressed K09510: DnaJ homolog subfamily B member 4
6 Sobic.004G247000 -(PubMedID : 26976818)@"Gln-4(Ortholog in maize:Martin et al., 2006)"(PubMedID : 31659887)@glutamine synthetase, catalytic domain containing protein, expressed K01915: glnA, glutamine synthetase
7 Sobic.008G016900 glucosamine--fructose-6-phosphate aminotransferase 1, putative, expressed K00820: glmS, glutamine---fructose-6-phosphate transaminase (isomerizing)
8 Sobic.004G350300 No apical meristem protein, putative, expressed -
9 Sobic.001G162100 WRKY94, expressed -
10 Sobic.004G274400 GCN5-related N-acetyltransferase, putative, expressed -
11 Sobic.003G076500 MYB family transcription factor, putative, expressed -
12 Sobic.001G082900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF1336 domain containing protein, expressed -
13 Sobic.001G436000 expressed protein -
14 Sobic.010G062800 transporter, major facilitator family, putative, expressed K13783: MFS transporter, OPA family, solute carrier family 37 (glycerol-3-phosphate transporter), member 1/2
15 Sobic.009G179200 endoplasmic reticulum-Golgi intermediate compartment protein 3, putative, expressed -
16 Sobic.003G034700 phosphofructokinase 3(PubMedID : 26465154)@6-phosphofructokinase, putative, expressed K00850: pfkA, 6-phosphofructokinase 1
17 Sobic.007G006600 expressed protein -
18 Sobic.004G321900 26S protease regulatory subunit 7, putative, expressed K03061: PSMC2, 26S proteasome regulatory subunit T1
19 Sobic.001G078800 similar to Serine/threonine-protein kinase SAPK8(PubMedID : 29862293)@CAMK_CAMK_like.22 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K14498: serine/threonine-protein kinase SRK2
20 Sobic.002G122700 expressed protein -


Gene co-expression network
sample Sobic002G313800 Sobic002G313800 Sobic002G293300 Sobic002G293300 Sobic002G313800--Sobic002G293300 Sobic003G367300 Sobic003G367300 Sobic002G313800--Sobic003G367300 Sobic001G434900 Sobic001G434900 Sobic002G313800--Sobic001G434900 Sobic004G320800 Sobic004G320800 Sobic002G313800--Sobic004G320800 Sobic003G002400 Sobic003G002400 Sobic002G313800--Sobic003G002400 Sobic004G247000 Sobic004G247000 Sobic002G313800--Sobic004G247000 Sobic008G016900 Sobic008G016900 Sobic002G313800--Sobic008G016900 Sobic004G350300 Sobic004G350300 Sobic002G313800--Sobic004G350300 Sobic001G162100 Sobic001G162100 Sobic002G313800--Sobic001G162100 Sobic002G293300--Sobic003G367300 Sobic001G436000 Sobic001G436000 Sobic002G293300--Sobic001G436000 Sobic002G379400 Sobic002G379400 Sobic002G293300--Sobic002G379400 Sobic010G052800 Sobic010G052800 Sobic002G293300--Sobic010G052800 Sobic009G231200 Sobic009G231200 Sobic002G293300--Sobic009G231200 Sobic002G330300 Sobic002G330300 Sobic002G293300--Sobic002G330300 Sobic001G082900 Sobic001G082900 Sobic002G293300--Sobic001G082900 Sobic004G025000 Sobic004G025000 Sobic002G293300--Sobic004G025000 Sobic001G516100 Sobic001G516100 Sobic002G293300--Sobic001G516100 Sobic003G367300--Sobic002G293300 Sobic003G367300--Sobic001G516100 Sobic003G367300--Sobic001G434900 Sobic007G006600 Sobic007G006600 Sobic003G367300--Sobic007G006600 Sobic004G271700 Sobic004G271700 Sobic003G367300--Sobic004G271700 Sobic009G079300 Sobic009G079300 Sobic003G367300--Sobic009G079300 Sobic003G367300--Sobic001G436000 Sobic003G367300--Sobic003G002400 Sobic003G367300--Sobic001G162100 Sobic002G122700 Sobic002G122700 Sobic001G434900--Sobic002G122700 Sobic001G434900--Sobic004G350300 Sobic001G434900--Sobic003G002400 Sobic001G434900--Sobic003G367300 Sobic006G225600 Sobic006G225600 Sobic001G434900--Sobic006G225600 Sobic005G176000 Sobic005G176000 Sobic001G434900--Sobic005G176000 Sobic003G248600 Sobic003G248600 Sobic001G434900--Sobic003G248600 Sobic001G434900--Sobic001G162100 Sobic004G274400 Sobic004G274400 Sobic001G434900--Sobic004G274400 Sobic004G320800--Sobic002G313800 Sobic005G026100 Sobic005G026100 Sobic004G320800--Sobic005G026100 Sobic001G358000 Sobic001G358000 Sobic004G320800--Sobic001G358000 Sobic007G006900 Sobic007G006900 Sobic004G320800--Sobic007G006900 Sobic004G320800--Sobic001G434900 Sobic004G320800--Sobic002G293300 Sobic004G320800--Sobic003G367300 Sobic004G320800--Sobic003G002400 Sobic001G425800 Sobic001G425800 Sobic004G320800--Sobic001G425800 Sobic003G002400--Sobic004G350300 Sobic003G002400--Sobic004G274400 Sobic003G002400--Sobic001G434900 Sobic002G045300 Sobic002G045300 Sobic003G002400--Sobic002G045300 Sobic003G220600 Sobic003G220600 Sobic003G002400--Sobic003G220600 Sobic003G002400--Sobic004G271700 Sobic001G122500 Sobic001G122500 Sobic003G002400--Sobic001G122500 Sobic006G033200 Sobic006G033200 Sobic003G002400--Sobic006G033200 Sobic010G101500 Sobic010G101500 Sobic003G002400--Sobic010G101500 Sobic003G077900 Sobic003G077900 Sobic004G247000--Sobic003G077900 Sobic001G541100 Sobic001G541100 Sobic004G247000--Sobic001G541100 Sobic009G005900 Sobic009G005900 Sobic004G247000--Sobic009G005900 Sobic003G076500 Sobic003G076500 Sobic004G247000--Sobic003G076500 Sobic009G135900 Sobic009G135900 Sobic004G247000--Sobic009G135900 Sobic001G070000 Sobic001G070000 Sobic004G247000--Sobic001G070000 Sobic002G400000 Sobic002G400000 Sobic004G247000--Sobic002G400000 Sobic010G205300 Sobic010G205300 Sobic004G247000--Sobic010G205300 Sobic004G181900 Sobic004G181900 Sobic004G247000--Sobic004G181900 Sobic008G016900--Sobic002G330300 Sobic008G016900--Sobic002G379400 Sobic010G062800 Sobic010G062800 Sobic008G016900--Sobic010G062800 Sobic001G283500 Sobic001G283500 Sobic008G016900--Sobic001G283500 Sobic007G188100 Sobic007G188100 Sobic008G016900--Sobic007G188100 Sobic004G145200 Sobic004G145200 Sobic008G016900--Sobic004G145200 Sobic008G016900--Sobic001G162100 Sobic009G059700 Sobic009G059700 Sobic008G016900--Sobic009G059700 Sobic002G343500 Sobic002G343500 Sobic008G016900--Sobic002G343500 Sobic004G350300--Sobic003G002400 Sobic004G350300--Sobic001G434900 Sobic004G350300--Sobic003G248600 Sobic004G321900 Sobic004G321900 Sobic004G350300--Sobic004G321900 Sobic004G183400 Sobic004G183400 Sobic004G350300--Sobic004G183400 Sobic004G350300--Sobic001G122500 Sobic004G350300--Sobic002G045300 Sobic001G433400 Sobic001G433400 Sobic004G350300--Sobic001G433400 Sobic004G350300--Sobic004G274400 Sobic001G162100--Sobic006G225600 Sobic004G234900 Sobic004G234900 Sobic001G162100--Sobic004G234900 Sobic001G162100--Sobic009G059700 Sobic001G162100--Sobic008G016900 Sobic001G162100--Sobic010G062800 Sobic001G162100--Sobic002G122700 Sobic001G162100--Sobic001G434900 Sobic001G098200 Sobic001G098200 Sobic001G162100--Sobic001G098200 Sobic009G219900 Sobic009G219900 Sobic001G162100--Sobic009G219900
Octagon: transcription factors


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