Gene annotation
Transcriptome id Sobic.001G082900.1
Synonym Sb01g007470
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
DUF1336 domain containing protein, expressed
UniProt C5X065
Pfam PF07059
Panther DB PTHR31558 PTHR31558:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G13970 : Protein of unknown function (DUF1336)
RAP-DB (Rice) LOC_Os03g55180.1 : DUF1336 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a016764 , Zm00025a008236
Brachypodium PNT74101 , PNT74102 , PNT74103 , KQK13087 , KQK13086 , KQK13088
Barley -
Wheat TraesCS5B02G401900 , TraesCS5B02G401900 , TraesCS5A02G396900 , TraesCS5D02G406600 , TraesCS5D02G406600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G293300 octicosapeptide/Phox/Bem1p, putative, expressed -
2 Sobic.009G231200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@protein of unknown function DUF1421 domain containing protein, expressed -
3 Sobic.001G436000 expressed protein -
4 Sobic.003G238000 ras-related protein, putative, expressed K07936: GTP-binding nuclear protein Ran
5 Sobic.007G140900 similar to Putative uncharacterized protein(PubMedID : 29862293)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.33 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
6 Sobic.001G420100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DnaK family protein, putative, expressed K03283: heat shock 70kDa protein 1/2/6/8
7 Sobic.004G059900 bZIP transcription factor domain containing protein, expressed -
8 Sobic.003G032900 expressed protein -
9 Sobic.003G034700 phosphofructokinase 3(PubMedID : 26465154)@6-phosphofructokinase, putative, expressed K00850: pfkA, 6-phosphofructokinase 1
10 Sobic.001G064500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@chaperone protein dnaJ, putative, expressed K09503: DnaJ homolog subfamily A member 2
11 Sobic.002G313800 Homologous to Dof genes in Arabidopsis and rice.(PubMedID : 21161392)@dof zinc finger domain containing protein, putative, expressed -
12 Sobic.010G217532 - -
13 Sobic.010G052800 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed -
14 Sobic.002G203000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.34 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
15 Sobic.001G333600 membrane-anchored ubiquitin-fold protein, putative, expressed -
16 Sobic.003G367300 actin, putative, expressed K10355: actin, other eukaryote
17 Sobic.009G195800 Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.25 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K07198: PRKAA, 5'-AMP-activated protein kinase, catalytic alpha subunit
18 Sobic.001G358300 SNARE associated Golgi protein, putative, expressed -
19 Sobic.002G379400 CAMK_CAMK_like.7 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K14498: serine/threonine-protein kinase SRK2
20 Sobic.004G025000 CAMK_CAMK_like.12 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase


Gene co-expression network
sample Sobic001G082900 Sobic001G082900 Sobic002G293300 Sobic002G293300 Sobic001G082900--Sobic002G293300 Sobic009G231200 Sobic009G231200 Sobic001G082900--Sobic009G231200 Sobic001G436000 Sobic001G436000 Sobic001G082900--Sobic001G436000 Sobic003G238000 Sobic003G238000 Sobic001G082900--Sobic003G238000 Sobic007G140900 Sobic007G140900 Sobic001G082900--Sobic007G140900 Sobic001G420100 Sobic001G420100 Sobic001G082900--Sobic001G420100 Sobic004G059900 Sobic004G059900 Sobic001G082900--Sobic004G059900 Sobic003G032900 Sobic003G032900 Sobic001G082900--Sobic003G032900 Sobic003G034700 Sobic003G034700 Sobic001G082900--Sobic003G034700 Sobic003G367300 Sobic003G367300 Sobic002G293300--Sobic003G367300 Sobic002G293300--Sobic001G436000 Sobic002G379400 Sobic002G379400 Sobic002G293300--Sobic002G379400 Sobic010G052800 Sobic010G052800 Sobic002G293300--Sobic010G052800 Sobic002G293300--Sobic009G231200 Sobic002G330300 Sobic002G330300 Sobic002G293300--Sobic002G330300 Sobic002G293300--Sobic001G082900 Sobic004G025000 Sobic004G025000 Sobic002G293300--Sobic004G025000 Sobic001G516100 Sobic001G516100 Sobic002G293300--Sobic001G516100 Sobic004G031600 Sobic004G031600 Sobic009G231200--Sobic004G031600 Sobic009G231200--Sobic002G293300 Sobic009G231200--Sobic010G052800 Sobic009G180500 Sobic009G180500 Sobic009G231200--Sobic009G180500 Sobic009G231200--Sobic001G082900 Sobic009G200800 Sobic009G200800 Sobic009G231200--Sobic009G200800 Sobic001G333600 Sobic001G333600 Sobic009G231200--Sobic001G333600 Sobic005G026100 Sobic005G026100 Sobic009G231200--Sobic005G026100 Sobic001G031600 Sobic001G031600 Sobic009G231200--Sobic001G031600 Sobic001G436000--Sobic002G379400 Sobic001G436000--Sobic002G293300 Sobic001G436000--Sobic004G025000 Sobic008G059000 Sobic008G059000 Sobic001G436000--Sobic008G059000 Sobic001G081600 Sobic001G081600 Sobic001G436000--Sobic001G081600 Sobic001G436000--Sobic002G330300 Sobic001G436000--Sobic003G367300 Sobic006G205200 Sobic006G205200 Sobic001G436000--Sobic006G205200 Sobic002G344700 Sobic002G344700 Sobic001G436000--Sobic002G344700 Sobic003G238000--Sobic002G293300 Sobic003G238000--Sobic004G059900 Sobic003G238000--Sobic001G436000 Sobic001G523200 Sobic001G523200 Sobic003G238000--Sobic001G523200 Sobic003G238000--Sobic003G032900 Sobic001G358300 Sobic001G358300 Sobic003G238000--Sobic001G358300 Sobic003G238000--Sobic009G180500 Sobic003G238000--Sobic007G140900 Sobic003G238000--Sobic002G379400 Sobic009G195800 Sobic009G195800 Sobic007G140900--Sobic009G195800 Sobic007G160200 Sobic007G160200 Sobic007G140900--Sobic007G160200 Sobic009G037800 Sobic009G037800 Sobic007G140900--Sobic009G037800 Sobic007G140900--Sobic003G238000 Sobic007G140900--Sobic001G436000 Sobic010G233400 Sobic010G233400 Sobic007G140900--Sobic010G233400 Sobic007G140900--Sobic001G082900 Sobic007G140900--Sobic001G523200 Sobic004G283300 Sobic004G283300 Sobic007G140900--Sobic004G283300 Sobic009G231400 Sobic009G231400 Sobic001G420100--Sobic009G231400 Sobic001G093200 Sobic001G093200 Sobic001G420100--Sobic001G093200 Sobic006G184800 Sobic006G184800 Sobic001G420100--Sobic006G184800 Sobic009G163900 Sobic009G163900 Sobic001G420100--Sobic009G163900 Sobic001G064500 Sobic001G064500 Sobic001G420100--Sobic001G064500 Sobic010G076700 Sobic010G076700 Sobic001G420100--Sobic010G076700 Sobic002G203000 Sobic002G203000 Sobic001G420100--Sobic002G203000 Sobic001G092600 Sobic001G092600 Sobic001G420100--Sobic001G092600 Sobic004G249900 Sobic004G249900 Sobic001G420100--Sobic004G249900 Sobic004G059900--Sobic001G358300 Sobic004G059900--Sobic003G238000 Sobic002G343300 Sobic002G343300 Sobic004G059900--Sobic002G343300 Sobic001G311100 Sobic001G311100 Sobic004G059900--Sobic001G311100 Sobic007G216500 Sobic007G216500 Sobic004G059900--Sobic007G216500 Sobic004G059900--Sobic002G293300 Sobic001G415000 Sobic001G415000 Sobic004G059900--Sobic001G415000 Sobic004G059900--Sobic009G231200 Sobic002G397600 Sobic002G397600 Sobic004G059900--Sobic002G397600 Sobic001G063600 Sobic001G063600 Sobic003G032900--Sobic001G063600 Sobic004G278200 Sobic004G278200 Sobic003G032900--Sobic004G278200 Sobic002G427400 Sobic002G427400 Sobic003G032900--Sobic002G427400 Sobic008G159100 Sobic008G159100 Sobic003G032900--Sobic008G159100 Sobic001G080300 Sobic001G080300 Sobic003G032900--Sobic001G080300 Sobic001G476400 Sobic001G476400 Sobic003G032900--Sobic001G476400 Sobic003G373150 Sobic003G373150 Sobic003G032900--Sobic003G373150 Sobic010G080400 Sobic010G080400 Sobic003G032900--Sobic010G080400 Sobic003G032900--Sobic004G025000 Sobic001G153200 Sobic001G153200 Sobic003G034700--Sobic001G153200 Sobic010G174500 Sobic010G174500 Sobic003G034700--Sobic010G174500 Sobic005G209500 Sobic005G209500 Sobic003G034700--Sobic005G209500 Sobic002G130800 Sobic002G130800 Sobic003G034700--Sobic002G130800 Sobic007G006900 Sobic007G006900 Sobic003G034700--Sobic007G006900 Sobic001G463000 Sobic001G463000 Sobic003G034700--Sobic001G463000 Sobic003G076500 Sobic003G076500 Sobic003G034700--Sobic003G076500 Sobic001G541100 Sobic001G541100 Sobic003G034700--Sobic001G541100 Sobic003G034700--Sobic001G082900
Octagon: transcription factors


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