Gene annotation
Transcriptome id Sobic.003G235500.1
Synonym Sb03g029290
Functional annotation expressed protein
UniProt C5XF41
Pfam -
Panther DB PTHR35831 PTHR35831:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os01g45470.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.003G235500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G030800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@zinc finger family protein, putative, expressed -
2 Sobic.003G231800 down-regulated TF in developmental senescence(PubMedID : 27586543)@MYB family transcription factor, putative, expressed -
3 Sobic.007G189700 - -
4 Sobic.010G183100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@agenet domain containing protein, putative, expressed -
5 Sobic.003G036100 - -
6 Sobic.009G254600 hydrolase, alpha/beta fold family domain containing protein, expressed -
7 Sobic.001G189100 coatomer subunit beta-1, putative, expressed K17301: COPB1, coatomer subunit beta
8 Sobic.001G189100 coatomer subunit beta-1, putative, expressed K17301: COPB1, coatomer subunit beta
9 Sobic.001G406000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@STE_MEKK_ste11_MAP3K.13 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
10 Sobic.008G104601 - -
11 Sobic.009G222200 E3 ubiquitin ligase, putative, expressed K16276: K16276, zinc finger protein-like protein
12 Sobic.004G353700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
13 Sobic.008G081200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peptide transporter PTR3-A, putative, expressed -
14 Sobic.001G520800 expressed protein -
15 Sobic.004G035700 - -
16 Sobic.005G202600 tropinone reductase 2, putative, expressed -
17 Sobic.002G233300 Cupredoxin superfamily protein(PubMedID : 26465154)@plastocyanin-like domain containing protein, putative, expressed -
18 Sobic.009G244300 down-regulated TF in developmental senescence(PubMedID : 27586543)@MYB family transcription factor, putative, expressed -
19 Sobic.003G237600 expressed protein -
20 Sobic.010G038500 GDSL-like lipase/acylhydrolase, putative, expressed -


Gene co-expression network
sample Sobic003G235500 Sobic003G235500 Sobic010G030800 Sobic010G030800 Sobic003G235500--Sobic010G030800 Sobic003G231800 Sobic003G231800 Sobic003G235500--Sobic003G231800 Sobic007G189700 Sobic007G189700 Sobic003G235500--Sobic007G189700 Sobic010G183100 Sobic010G183100 Sobic003G235500--Sobic010G183100 Sobic003G036100 Sobic003G036100 Sobic003G235500--Sobic003G036100 Sobic009G254600 Sobic009G254600 Sobic003G235500--Sobic009G254600 Sobic001G189100 Sobic001G189100 Sobic003G235500--Sobic001G189100 Sobic001G406000 Sobic001G406000 Sobic003G235500--Sobic001G406000 Sobic010G030800--Sobic007G189700 Sobic009G222200 Sobic009G222200 Sobic010G030800--Sobic009G222200 Sobic010G030800--Sobic010G183100 Sobic005G202600 Sobic005G202600 Sobic010G030800--Sobic005G202600 Sobic010G030800--Sobic003G235500 Sobic004G353700 Sobic004G353700 Sobic010G030800--Sobic004G353700 Sobic010G030800--Sobic003G036100 Sobic010G030800--Sobic001G189100 Sobic009G244300 Sobic009G244300 Sobic003G231800--Sobic009G244300 Sobic009G244600 Sobic009G244600 Sobic003G231800--Sobic009G244600 Sobic004G267000 Sobic004G267000 Sobic003G231800--Sobic004G267000 Sobic003G231800--Sobic010G183100 Sobic007G034300 Sobic007G034300 Sobic003G231800--Sobic007G034300 Sobic001G520800 Sobic001G520800 Sobic003G231800--Sobic001G520800 Sobic006G006700 Sobic006G006700 Sobic003G231800--Sobic006G006700 Sobic003G231800--Sobic009G254600 Sobic003G231800--Sobic003G235500 Sobic007G189700--Sobic010G183100 Sobic004G035700 Sobic004G035700 Sobic007G189700--Sobic004G035700 Sobic007G189700--Sobic010G030800 Sobic003G199800 Sobic003G199800 Sobic007G189700--Sobic003G199800 Sobic008G081200 Sobic008G081200 Sobic007G189700--Sobic008G081200 Sobic007G189700--Sobic009G222200 Sobic007G189700--Sobic009G254600 Sobic002G040100 Sobic002G040100 Sobic007G189700--Sobic002G040100 Sobic007G189700--Sobic001G406000 Sobic010G183100--Sobic004G035700 Sobic010G183100--Sobic007G189700 Sobic010G183100--Sobic008G081200 Sobic001G068400 Sobic001G068400 Sobic010G183100--Sobic001G068400 Sobic010G183100--Sobic003G199800 Sobic010G038500 Sobic010G038500 Sobic010G183100--Sobic010G038500 Sobic010G183100--Sobic002G040100 Sobic010G183100--Sobic009G254600 Sobic010G183100--Sobic009G222200 Sobic003G036100--Sobic001G189100 Sobic003G237600 Sobic003G237600 Sobic003G036100--Sobic003G237600 Sobic003G036100--Sobic004G353700 Sobic003G036100--Sobic007G189700 Sobic003G036100--Sobic010G030800 Sobic003G036100--Sobic009G222200 Sobic003G036100--Sobic009G254600 Sobic001G111700 Sobic001G111700 Sobic003G036100--Sobic001G111700 Sobic009G254600--Sobic010G038500 Sobic009G254600--Sobic008G081200 Sobic009G254600--Sobic001G189100 Sobic009G254600--Sobic004G035700 Sobic009G254600--Sobic003G237600 Sobic009G254600--Sobic010G183100 Sobic009G254600--Sobic001G068400 Sobic009G254600--Sobic007G189700 Sobic001G189100--Sobic001G189100 Sobic001G189100--Sobic003G237600 Sobic001G189100--Sobic009G254600 Sobic001G189100--Sobic003G036100 Sobic001G355600 Sobic001G355600 Sobic001G189100--Sobic001G355600 Sobic001G189100--Sobic010G183100 Sobic001G189100--Sobic009G222200 Sobic001G189100--Sobic004G035700 Sobic008G106200 Sobic008G106200 Sobic001G189100--Sobic008G106200 Sobic006G244000 Sobic006G244000 Sobic001G406000--Sobic006G244000 Sobic001G406000--Sobic007G189700 Sobic001G406000--Sobic004G353700 Sobic001G406000--Sobic010G030800 Sobic008G104601 Sobic008G104601 Sobic001G406000--Sobic008G104601 Sobic001G406000--Sobic003G235500 Sobic003G234400 Sobic003G234400 Sobic001G406000--Sobic003G234400 Sobic001G329400 Sobic001G329400 Sobic001G406000--Sobic001G329400 Sobic003G431900 Sobic003G431900 Sobic001G406000--Sobic003G431900
Octagon: transcription factors


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