Gene annotation
Transcriptome id Sobic.009G254600.1
Synonym
Functional annotation hydrolase, alpha/beta fold family domain containing protein, expressed
UniProt A0A1B6PA69
Pfam PF00561
Panther DB PTHR10992 PTHR10992:SF802
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G24420 : alpha/beta-Hydrolases superfamily protein
RAP-DB (Rice) LOC_Os05g51240.1 : hydrolase, alpha/beta fold family domain containing protein, expressed
MaizeGDB (Corn) Zm00025a044763
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G038500 GDSL-like lipase/acylhydrolase, putative, expressed -
2 Sobic.008G081200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peptide transporter PTR3-A, putative, expressed -
3 Sobic.001G189100 coatomer subunit beta-1, putative, expressed K17301: COPB1, coatomer subunit beta
4 Sobic.001G189100 coatomer subunit beta-1, putative, expressed K17301: COPB1, coatomer subunit beta
5 Sobic.004G035700 - -
6 Sobic.003G237600 expressed protein -
7 Sobic.010G183100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@agenet domain containing protein, putative, expressed -
8 Sobic.001G068400 - -
9 Sobic.007G189700 - -
10 Sobic.003G231800 down-regulated TF in developmental senescence(PubMedID : 27586543)@MYB family transcription factor, putative, expressed -
11 Sobic.004G245300 - -
12 Sobic.002G213000 - -
13 Sobic.001G297400 histone H3, putative, expressed K11253: histone H3
14 Sobic.003G036100 - -
15 Sobic.006G006700 - -
16 Sobic.002G040100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@- -
17 Sobic.010G030800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@zinc finger family protein, putative, expressed -
18 Sobic.002G233300 Cupredoxin superfamily protein(PubMedID : 26465154)@plastocyanin-like domain containing protein, putative, expressed -
19 Sobic.008G106200 cytochrome P450, putative, expressed -
20 Sobic.010G183032 - -


Gene co-expression network
sample Sobic009G254600 Sobic009G254600 Sobic010G038500 Sobic010G038500 Sobic009G254600--Sobic010G038500 Sobic008G081200 Sobic008G081200 Sobic009G254600--Sobic008G081200 Sobic001G189100 Sobic001G189100 Sobic009G254600--Sobic001G189100 Sobic004G035700 Sobic004G035700 Sobic009G254600--Sobic004G035700 Sobic003G237600 Sobic003G237600 Sobic009G254600--Sobic003G237600 Sobic010G183100 Sobic010G183100 Sobic009G254600--Sobic010G183100 Sobic001G068400 Sobic001G068400 Sobic009G254600--Sobic001G068400 Sobic007G189700 Sobic007G189700 Sobic009G254600--Sobic007G189700 Sobic010G038500--Sobic008G081200 Sobic010G038500--Sobic009G254600 Sobic010G038500--Sobic001G068400 Sobic002G040100 Sobic002G040100 Sobic010G038500--Sobic002G040100 Sobic010G038500--Sobic004G035700 Sobic010G038500--Sobic010G183100 Sobic002G233300 Sobic002G233300 Sobic010G038500--Sobic002G233300 Sobic003G199800 Sobic003G199800 Sobic010G038500--Sobic003G199800 Sobic003G131000 Sobic003G131000 Sobic010G038500--Sobic003G131000 Sobic008G081200--Sobic010G038500 Sobic008G081200--Sobic010G183100 Sobic008G081200--Sobic009G254600 Sobic008G081200--Sobic001G068400 Sobic008G081200--Sobic002G040100 Sobic008G081200--Sobic004G035700 Sobic008G081200--Sobic003G199800 Sobic008G081200--Sobic007G189700 Sobic010G276400 Sobic010G276400 Sobic008G081200--Sobic010G276400 Sobic001G189100--Sobic001G189100 Sobic001G189100--Sobic003G237600 Sobic001G189100--Sobic009G254600 Sobic003G036100 Sobic003G036100 Sobic001G189100--Sobic003G036100 Sobic001G355600 Sobic001G355600 Sobic001G189100--Sobic001G355600 Sobic001G189100--Sobic010G183100 Sobic009G222200 Sobic009G222200 Sobic001G189100--Sobic009G222200 Sobic001G189100--Sobic004G035700 Sobic008G106200 Sobic008G106200 Sobic001G189100--Sobic008G106200 Sobic004G035700--Sobic010G183100 Sobic004G035700--Sobic007G189700 Sobic004G035700--Sobic001G068400 Sobic010G183032 Sobic010G183032 Sobic004G035700--Sobic010G183032 Sobic010G108401 Sobic010G108401 Sobic004G035700--Sobic010G108401 Sobic004G035700--Sobic009G254600 Sobic004G035700--Sobic010G038500 Sobic004G035700--Sobic002G040100 Sobic001G297400 Sobic001G297400 Sobic004G035700--Sobic001G297400 Sobic003G237600--Sobic001G189100 Sobic003G237600--Sobic001G355600 Sobic003G237600--Sobic003G036100 Sobic003G237600--Sobic009G254600 Sobic003G237600--Sobic009G222200 Sobic003G237600--Sobic010G183100 Sobic003G237600--Sobic004G035700 Sobic003G237600--Sobic008G106200 Sobic010G183100--Sobic004G035700 Sobic010G183100--Sobic007G189700 Sobic010G183100--Sobic008G081200 Sobic010G183100--Sobic001G068400 Sobic010G183100--Sobic003G199800 Sobic010G183100--Sobic010G038500 Sobic010G183100--Sobic002G040100 Sobic010G183100--Sobic009G254600 Sobic010G183100--Sobic009G222200 Sobic001G068400--Sobic002G040100 Sobic001G068400--Sobic010G038500 Sobic001G068400--Sobic010G183100 Sobic001G068400--Sobic004G035700 Sobic001G068400--Sobic008G081200 Sobic001G068400--Sobic010G276400 Sobic002G000500 Sobic002G000500 Sobic001G068400--Sobic002G000500 Sobic001G068400--Sobic003G199800 Sobic001G068400--Sobic010G183032 Sobic007G189700--Sobic010G183100 Sobic007G189700--Sobic004G035700 Sobic010G030800 Sobic010G030800 Sobic007G189700--Sobic010G030800 Sobic007G189700--Sobic003G199800 Sobic007G189700--Sobic008G081200 Sobic007G189700--Sobic009G222200 Sobic007G189700--Sobic009G254600 Sobic007G189700--Sobic002G040100 Sobic001G406000 Sobic001G406000 Sobic007G189700--Sobic001G406000
Octagon: transcription factors


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