Gene annotation
Transcriptome id Sobic.001G297400.1
Synonym Sb01g029010
Functional annotation histone H3, putative, expressed
UniProt A0A1B6QLV9
Pfam PF00125
Panther DB PTHR11426
NCBI CDD KOG1745; Histones H3 and H4
KEGG Orthology K11253; histone H3
Gene Ontology GO:0003677; DNA binding GO:0000786nucleosome


Orthologs (automatic annotation)
TAIR AT4G40030 : Histone superfamily protein
RAP-DB (Rice) LOC_Os06g04030.1 : histone H3, putative, expressed
MaizeGDB (Corn) -
Brachypodium KQJ82897
Barley HORVU5Hr1G109790.1
Wheat TraesCS3D02G103500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G183032 - -
2 Sobic.010G108401 - -
3 Sobic.004G035700 - -
4 Sobic.010G183100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@agenet domain containing protein, putative, expressed -
5 Sobic.001G068400 - -
6 Sobic.002G040100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@- -
7 Sobic.002G213000 - -
8 Sobic.010G038500 GDSL-like lipase/acylhydrolase, putative, expressed -
9 Sobic.009G254600 hydrolase, alpha/beta fold family domain containing protein, expressed -
10 Sobic.001G361700 expressed protein -
11 Sobic.008G038300 uncharacterized protein ycf53, putative, expressed -
12 Sobic.001G344600 late embryogenesis abundant protein, putative, expressed -
13 Sobic.008G081200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peptide transporter PTR3-A, putative, expressed -
14 Sobic.002G000500 isoflavone reductase, putative, expressed -
15 Sobic.007G189700 - -
16 Sobic.001G274600 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
17 Sobic.009G243500 polygalacturonase, putative, expressed -
18 Sobic.001G098600 expressed protein -
19 Sobic.003G199800 expressed protein -
20 Sobic.003G237600 expressed protein -


Gene co-expression network
sample Sobic001G297400 Sobic001G297400 Sobic010G183032 Sobic010G183032 Sobic001G297400--Sobic010G183032 Sobic010G108401 Sobic010G108401 Sobic001G297400--Sobic010G108401 Sobic004G035700 Sobic004G035700 Sobic001G297400--Sobic004G035700 Sobic010G183100 Sobic010G183100 Sobic001G297400--Sobic010G183100 Sobic001G068400 Sobic001G068400 Sobic001G297400--Sobic001G068400 Sobic002G040100 Sobic002G040100 Sobic001G297400--Sobic002G040100 Sobic002G213000 Sobic002G213000 Sobic001G297400--Sobic002G213000 Sobic010G038500 Sobic010G038500 Sobic001G297400--Sobic010G038500 Sobic009G254600 Sobic009G254600 Sobic001G297400--Sobic009G254600 Sobic010G183032--Sobic010G108401 Sobic008G038300 Sobic008G038300 Sobic010G183032--Sobic008G038300 Sobic010G183032--Sobic004G035700 Sobic001G274600 Sobic001G274600 Sobic010G183032--Sobic001G274600 Sobic010G183032--Sobic002G040100 Sobic010G183032--Sobic001G297400 Sobic010G183032--Sobic001G068400 Sobic010G183032--Sobic010G183100 Sobic002G000500 Sobic002G000500 Sobic010G183032--Sobic002G000500 Sobic010G108401--Sobic010G183032 Sobic010G108401--Sobic008G038300 Sobic010G108401--Sobic004G035700 Sobic010G108401--Sobic001G274600 Sobic010G108401--Sobic001G297400 Sobic010G108401--Sobic002G040100 Sobic010G108401--Sobic001G068400 Sobic010G108401--Sobic010G183100 Sobic010G108401--Sobic002G000500 Sobic004G035700--Sobic010G183100 Sobic007G189700 Sobic007G189700 Sobic004G035700--Sobic007G189700 Sobic004G035700--Sobic001G068400 Sobic004G035700--Sobic010G183032 Sobic004G035700--Sobic010G108401 Sobic004G035700--Sobic009G254600 Sobic004G035700--Sobic010G038500 Sobic004G035700--Sobic002G040100 Sobic004G035700--Sobic001G297400 Sobic010G183100--Sobic004G035700 Sobic010G183100--Sobic007G189700 Sobic008G081200 Sobic008G081200 Sobic010G183100--Sobic008G081200 Sobic010G183100--Sobic001G068400 Sobic003G199800 Sobic003G199800 Sobic010G183100--Sobic003G199800 Sobic010G183100--Sobic010G038500 Sobic010G183100--Sobic002G040100 Sobic010G183100--Sobic009G254600 Sobic009G222200 Sobic009G222200 Sobic010G183100--Sobic009G222200 Sobic001G068400--Sobic002G040100 Sobic001G068400--Sobic010G038500 Sobic001G068400--Sobic010G183100 Sobic001G068400--Sobic004G035700 Sobic001G068400--Sobic008G081200 Sobic010G276400 Sobic010G276400 Sobic001G068400--Sobic010G276400 Sobic001G068400--Sobic002G000500 Sobic001G068400--Sobic003G199800 Sobic001G068400--Sobic010G183032 Sobic002G040100--Sobic002G000500 Sobic002G040100--Sobic008G038300 Sobic002G040100--Sobic003G199800 Sobic002G040100--Sobic010G276400 Sobic002G040100--Sobic001G068400 Sobic010G109500 Sobic010G109500 Sobic002G040100--Sobic010G109500 Sobic002G040100--Sobic010G038500 Sobic002G040100--Sobic010G183032 Sobic003G209800 Sobic003G209800 Sobic002G040100--Sobic003G209800 Sobic002G213000--Sobic004G035700 Sobic002G213000--Sobic010G183100 Sobic002G213000--Sobic001G068400 Sobic002G213000--Sobic001G297400 Sobic002G213000--Sobic009G254600 Sobic001G189100 Sobic001G189100 Sobic002G213000--Sobic001G189100 Sobic003G237600 Sobic003G237600 Sobic002G213000--Sobic003G237600 Sobic002G213000--Sobic008G081200 Sobic010G038500--Sobic008G081200 Sobic010G038500--Sobic009G254600 Sobic010G038500--Sobic001G068400 Sobic010G038500--Sobic002G040100 Sobic010G038500--Sobic004G035700 Sobic010G038500--Sobic010G183100 Sobic002G233300 Sobic002G233300 Sobic010G038500--Sobic002G233300 Sobic010G038500--Sobic003G199800 Sobic003G131000 Sobic003G131000 Sobic010G038500--Sobic003G131000 Sobic009G254600--Sobic010G038500 Sobic009G254600--Sobic008G081200 Sobic009G254600--Sobic001G189100 Sobic009G254600--Sobic004G035700 Sobic009G254600--Sobic003G237600 Sobic009G254600--Sobic010G183100 Sobic009G254600--Sobic001G068400 Sobic009G254600--Sobic007G189700
Octagon: transcription factors


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