Gene annotation
Transcriptome id Sobic.003G263001.1
Synonym -
Functional annotation -
UniProt A0A1W0VZ21
Pfam PF13947 PF14380 PF07714
Panther DB PTHR27009 PTHR27009:SF21
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT5G38260 : Protein kinase superfamily protein
RAP-DB (Rice) LOC_Os01g49614.1 : Protein kinase domain containing protein, expressed
MaizeGDB (Corn) Zm00025a027959 , Zm00025a027953 , Zm00025a038864 , Zm00025a038866
Brachypodium KQJ85871 , PNT62347
Barley HORVU3Hr1G064130.7 , HORVU3Hr1G064130.9 , HORVU3Hr1G064130.18 , HORVU3Hr1G064130.10 , HORVU3Hr1G064130.17 , HORVU3Hr1G064130.16 , HORVU3Hr1G064130.12 , HORVU3Hr1G064130.19 , HORVU3Hr1G064130.15 , HORVU3Hr1G064130.11 , HORVU3Hr1G064130.31 , HORVU3Hr1G064130.30 , HORVU3Hr1G064130.27 , HORVU3Hr1G064130.25 , HORVU3Hr1G064130.22 , HORVU3Hr1G064130.23 , HORVU3Hr1G064130.21 , HORVU3Hr1G064130.28 , HORVU3Hr1G064130.29
Wheat TraesCS6D02G033700 , TraesCS5A02G051000 , TraesCS3B02G295000 , TraesCS3B02G295000 , TraesCS3B02G295000 , TraesCS3A02G261800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G012200 STE_PAK_Ste20_Slob_Wnk.1 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K08867: WNK, WNK lysine deficient protein kinase
2 Sobic.003G403500 lysine ketoglutarate reductase trans-splicing related 1, putative, expressed -
3 Sobic.003G397200 - -
4 Sobic.001G500800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@4-coumarate--CoA ligase-like 7, putative, expressed K01904: 4-coumarate--CoA ligase
5 Sobic.002G200700 expressed protein -
6 Sobic.003G224100 "domain confirmed by Pfam database, expressed in leaf and root"(PubMedID : 20499123)@OsGH3.5 - Probable indole-3-acetic acid-amido synthetase, expressed K14487: auxin responsive GH3 gene family
7 Sobic.005G110502 - -
8 Sobic.005G188600 - -
9 Sobic.007G141700 hcr2-5D, putative, expressed -
10 Sobic.007G126400 CPuORF27 - conserved peptide uORF-containing transcript, expressed K09338: homeobox-leucine zipper protein
11 Sobic.001G498000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@tyrosine protein kinase domain containing protein, putative, expressed -
12 Sobic.005G222900 RGH1A, putative, expressed -
13 Sobic.008G094000 Sugar transporter(PubMedID : 27330561)@Sugar transporter(PubMedID : 27330561)@nodulin MtN3 family protein, putative, expressed K15382: SLC50A, solute carrier family 50 (sugar transporter)
14 Sobic.002G201900 transporter family protein, putative, expressed -
15 Sobic.008G115900 mitochondrial carrier protein, putative, expressed -
16 Sobic.006G130000 STRUBBELIG-RECEPTOR FAMILY 8 precursor, putative, expressed K13436: pto-interacting protein 1
17 Sobic.003G002600 -(PubMedID : 23001790)@GLK2(PubMedID : 24676859)@GLK genes are members of the GARP superfamily and functions in a BS or M cell-type specific manner to regulate the proplastid to chloroplast transition(PubMedID : 22968911)@myb-like DNA-binding domain containing protein, expressed -
18 Sobic.003G386600 calreticulin precursor protein, putative, expressed K08057: calreticulin
19 Sobic.006G130800 transporter family protein, putative, expressed K08150: SLC2A13, MFS transporter, SP family, solute carrier family 2 (myo-inositol transporter), member 13
20 Sobic.008G022300 OsWAK116 - OsWAK receptor-like cytoplasmic kinase OsWAK-RLCK, expressed -


Gene co-expression network
sample Sobic003G263001 Sobic003G263001 Sobic005G012200 Sobic005G012200 Sobic003G263001--Sobic005G012200 Sobic003G403500 Sobic003G403500 Sobic003G263001--Sobic003G403500 Sobic003G397200 Sobic003G397200 Sobic003G263001--Sobic003G397200 Sobic001G500800 Sobic001G500800 Sobic003G263001--Sobic001G500800 Sobic002G200700 Sobic002G200700 Sobic003G263001--Sobic002G200700 Sobic003G224100 Sobic003G224100 Sobic003G263001--Sobic003G224100 Sobic005G110502 Sobic005G110502 Sobic003G263001--Sobic005G110502 Sobic005G188600 Sobic005G188600 Sobic003G263001--Sobic005G188600 Sobic007G141700 Sobic007G141700 Sobic003G263001--Sobic007G141700 Sobic003G007700 Sobic003G007700 Sobic005G012200--Sobic003G007700 Sobic005G012200--Sobic003G263001 Sobic003G162100 Sobic003G162100 Sobic005G012200--Sobic003G162100 Sobic005G012200--Sobic001G500800 Sobic001G381200 Sobic001G381200 Sobic005G012200--Sobic001G381200 Sobic003G002600 Sobic003G002600 Sobic005G012200--Sobic003G002600 Sobic005G012200--Sobic002G200700 Sobic001G351400 Sobic001G351400 Sobic005G012200--Sobic001G351400 Sobic005G012200--Sobic005G188600 Sobic002G001000 Sobic002G001000 Sobic003G403500--Sobic002G001000 Sobic003G403500--Sobic001G500800 Sobic003G375900 Sobic003G375900 Sobic003G403500--Sobic003G375900 Sobic002G367100 Sobic002G367100 Sobic003G403500--Sobic002G367100 Sobic003G403500--Sobic003G002600 Sobic004G201700 Sobic004G201700 Sobic003G403500--Sobic004G201700 Sobic004G131900 Sobic004G131900 Sobic003G403500--Sobic004G131900 Sobic003G403500--Sobic002G200700 Sobic004G340800 Sobic004G340800 Sobic003G403500--Sobic004G340800 Sobic010G241300 Sobic010G241300 Sobic003G397200--Sobic010G241300 Sobic008G186400 Sobic008G186400 Sobic003G397200--Sobic008G186400 Sobic008G183200 Sobic008G183200 Sobic003G397200--Sobic008G183200 Sobic003G397200--Sobic005G188600 Sobic006G102400 Sobic006G102400 Sobic003G397200--Sobic006G102400 Sobic008G187900 Sobic008G187900 Sobic003G397200--Sobic008G187900 Sobic009G034600 Sobic009G034600 Sobic003G397200--Sobic009G034600 Sobic003G397200--Sobic003G263001 Sobic007G059500 Sobic007G059500 Sobic003G397200--Sobic007G059500 Sobic001G488700 Sobic001G488700 Sobic001G500800--Sobic001G488700 Sobic010G196500 Sobic010G196500 Sobic001G500800--Sobic010G196500 Sobic001G500800--Sobic001G381200 Sobic006G213500 Sobic006G213500 Sobic001G500800--Sobic006G213500 Sobic001G500800--Sobic002G001000 Sobic002G187700 Sobic002G187700 Sobic001G500800--Sobic002G187700 Sobic001G500800--Sobic003G403500 Sobic003G302800 Sobic003G302800 Sobic001G500800--Sobic003G302800 Sobic006G175800 Sobic006G175800 Sobic001G500800--Sobic006G175800 Sobic002G200700--Sobic003G224100 Sobic002G200700--Sobic002G001000 Sobic002G201900 Sobic002G201900 Sobic002G200700--Sobic002G201900 Sobic002G200700--Sobic003G007700 Sobic006G064200 Sobic006G064200 Sobic002G200700--Sobic006G064200 Sobic010G269400 Sobic010G269400 Sobic002G200700--Sobic010G269400 Sobic002G136100 Sobic002G136100 Sobic002G200700--Sobic002G136100 Sobic006G130000 Sobic006G130000 Sobic002G200700--Sobic006G130000 Sobic006G258700 Sobic006G258700 Sobic002G200700--Sobic006G258700 Sobic003G224100--Sobic002G200700 Sobic006G011300 Sobic006G011300 Sobic003G224100--Sobic006G011300 Sobic003G224100--Sobic002G001000 Sobic001G339500 Sobic001G339500 Sobic003G224100--Sobic001G339500 Sobic003G224100--Sobic006G175800 Sobic003G224100--Sobic006G064200 Sobic008G077500 Sobic008G077500 Sobic003G224100--Sobic008G077500 Sobic001G413000 Sobic001G413000 Sobic003G224100--Sobic001G413000 Sobic003G224100--Sobic006G258700 Sobic001G329400 Sobic001G329400 Sobic005G110502--Sobic001G329400 Sobic009G140800 Sobic009G140800 Sobic005G110502--Sobic009G140800 Sobic004G283100 Sobic004G283100 Sobic005G110502--Sobic004G283100 Sobic006G160400 Sobic006G160400 Sobic005G110502--Sobic006G160400 Sobic004G125700 Sobic004G125700 Sobic005G110502--Sobic004G125700 Sobic004G238600 Sobic004G238600 Sobic005G110502--Sobic004G238600 Sobic002G098800 Sobic002G098800 Sobic005G110502--Sobic002G098800 Sobic008G115900 Sobic008G115900 Sobic005G110502--Sobic008G115900 Sobic008G104601 Sobic008G104601 Sobic005G110502--Sobic008G104601 Sobic001G065600 Sobic001G065600 Sobic005G188600--Sobic001G065600 Sobic001G158900 Sobic001G158900 Sobic005G188600--Sobic001G158900 Sobic006G188000 Sobic006G188000 Sobic005G188600--Sobic006G188000 Sobic003G443500 Sobic003G443500 Sobic005G188600--Sobic003G443500 Sobic006G114900 Sobic006G114900 Sobic005G188600--Sobic006G114900 Sobic006G101500 Sobic006G101500 Sobic005G188600--Sobic006G101500 Sobic005G188600--Sobic008G115900 Sobic001G098301 Sobic001G098301 Sobic005G188600--Sobic001G098301 Sobic005G188600--Sobic006G160400 Sobic010G231200 Sobic010G231200 Sobic007G141700--Sobic010G231200 Sobic009G129300 Sobic009G129300 Sobic007G141700--Sobic009G129300 Sobic003G327000 Sobic003G327000 Sobic007G141700--Sobic003G327000 Sobic003G431700 Sobic003G431700 Sobic007G141700--Sobic003G431700 Sobic005G089600 Sobic005G089600 Sobic007G141700--Sobic005G089600 Sobic009G062400 Sobic009G062400 Sobic007G141700--Sobic009G062400 Sobic004G059800 Sobic004G059800 Sobic007G141700--Sobic004G059800 Sobic003G398800 Sobic003G398800 Sobic007G141700--Sobic003G398800 Sobic001G491000 Sobic001G491000 Sobic007G141700--Sobic001G491000
Octagon: transcription factors


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