Gene annotation
Transcriptome id Sobic.003G410100.1
Synonym Sb03g044470
Functional annotation protein kinase domain containing protein, expressed
UniProt C5XGY5
Pfam PF00069
Panther DB PTHR24056 PTHR24056:SF210
NCBI CDD -
KEGG Orthology K08819; cyclin-dependent kinase 12/13
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT5G50860 : Protein kinase superfamily protein
RAP-DB (Rice) LOC_Os01g70130.1 : protein kinase domain containing protein, expressed
MaizeGDB (Corn) Zm00025a039254 , Zm00025a018187 , Zm00025a052383 , Zm00025a026210 , Zm00025a020703
Brachypodium KQK21688 , KQK21687 , KQK11300
Barley HORVU3Hr1G095820.9 , HORVU3Hr1G095820.3 , HORVU3Hr1G095820.8 , HORVU3Hr1G095820.5 , HORVU3Hr1G095820.4 , HORVU3Hr1G095820.7 , HORVU3Hr1G095820.6 , HORVU3Hr1G095820.1 , HORVU3Hr1G095820.2
Wheat TraesCS3D02G432000 , TraesCS3A02G439200 , TraesCS3B02G473100
Populus -


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cDNA sequences
Sobic.003G410100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G133400 eukaryotic translation initiation factor 1A, putative, expressed K03236: translation initiation factor 1A
2 Sobic.007G062200 expressed protein -
3 Sobic.010G019300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@hydrolase, NUDIX family, domain containing protein, expressed K18447: ADP-sugar diphosphatase
4 Sobic.002G001000 transmembrane amino acid transporter protein, putative, expressed -
5 Sobic.003G224100 "domain confirmed by Pfam database, expressed in leaf and root"(PubMedID : 20499123)@OsGH3.5 - Probable indole-3-acetic acid-amido synthetase, expressed K14487: auxin responsive GH3 gene family
6 Sobic.004G103000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@spotted leaf 11, putative, expressed -
7 Sobic.001G498000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@tyrosine protein kinase domain containing protein, putative, expressed -
8 Sobic.003G339700 Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.12 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
9 Sobic.008G089900 PQ loop repeat domain containing protein, expressed K12386: cystinosin
10 Sobic.009G241100 expressed protein -
11 Sobic.001G333600 membrane-anchored ubiquitin-fold protein, putative, expressed -
12 Sobic.002G200700 expressed protein -
13 Sobic.003G263001 - -
14 Sobic.005G026100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@hydroxymethylglutaryl-CoA lyase, putative, expressed K01640: E4.1.3.4, HMGCL, hydroxymethylglutaryl-CoA lyase
15 Sobic.001G407600 plastid-targeted omega-3 fatty acid desaturase(PubMedID : 31661847)@omega-3 fatty acid desaturase, chloroplast precursor, putative, expressed K10257: FAD3, FAD7, FAD8, acyl-lipid omega-3 desaturase
16 Sobic.010G102800 STELAR K+ outward rectifier(PubMedID : 26465154)@similar to Potassium outward rectifying channel(PubMedID : 29862293)@potassium channel SKOR, putative, expressed -
17 Sobic.001G143000 Phosphatase(PubMedID : 30367619)@BTBA4 - Bric-a-Brac,Tramtrack, Broad Complex BTB domain with Ankyrin repeat region, expressed K14508: regulatory protein NPR1
18 Sobic.010G251300 OsSBeL1 - Putative Serine Beta-Lactamase homologue, expressed K08869: ADCK, aarF domain-containing kinase
19 Sobic.005G142700 heparan-alpha-glucosaminide N-acetyltransferase, putative, expressed -
20 Sobic.002G201900 transporter family protein, putative, expressed -


Gene co-expression network
sample Sobic003G410100 Sobic003G410100 Sobic004G133400 Sobic004G133400 Sobic003G410100--Sobic004G133400 Sobic007G062200 Sobic007G062200 Sobic003G410100--Sobic007G062200 Sobic010G019300 Sobic010G019300 Sobic003G410100--Sobic010G019300 Sobic002G001000 Sobic002G001000 Sobic003G410100--Sobic002G001000 Sobic003G224100 Sobic003G224100 Sobic003G410100--Sobic003G224100 Sobic004G103000 Sobic004G103000 Sobic003G410100--Sobic004G103000 Sobic001G498000 Sobic001G498000 Sobic003G410100--Sobic001G498000 Sobic003G339700 Sobic003G339700 Sobic003G410100--Sobic003G339700 Sobic008G089900 Sobic008G089900 Sobic003G410100--Sobic008G089900 Sobic002G200700 Sobic002G200700 Sobic004G133400--Sobic002G200700 Sobic002G226400 Sobic002G226400 Sobic004G133400--Sobic002G226400 Sobic004G133400--Sobic003G410100 Sobic009G135900 Sobic009G135900 Sobic004G133400--Sobic009G135900 Sobic004G133400--Sobic008G089900 Sobic009G207300 Sobic009G207300 Sobic004G133400--Sobic009G207300 Sobic005G016500 Sobic005G016500 Sobic004G133400--Sobic005G016500 Sobic009G241100 Sobic009G241100 Sobic004G133400--Sobic009G241100 Sobic002G128900 Sobic002G128900 Sobic004G133400--Sobic002G128900 Sobic007G062200--Sobic001G498000 Sobic003G334000 Sobic003G334000 Sobic007G062200--Sobic003G334000 Sobic003G051000 Sobic003G051000 Sobic007G062200--Sobic003G051000 Sobic010G251300 Sobic010G251300 Sobic007G062200--Sobic010G251300 Sobic010G102800 Sobic010G102800 Sobic007G062200--Sobic010G102800 Sobic007G062200--Sobic003G339700 Sobic007G062200--Sobic002G200700 Sobic008G077500 Sobic008G077500 Sobic007G062200--Sobic008G077500 Sobic004G207400 Sobic004G207400 Sobic007G062200--Sobic004G207400 Sobic001G357300 Sobic001G357300 Sobic010G019300--Sobic001G357300 Sobic010G019300--Sobic003G410100 Sobic010G019300--Sobic009G135900 Sobic001G301800 Sobic001G301800 Sobic010G019300--Sobic001G301800 Sobic001G407600 Sobic001G407600 Sobic010G019300--Sobic001G407600 Sobic002G339600 Sobic002G339600 Sobic010G019300--Sobic002G339600 Sobic005G026100 Sobic005G026100 Sobic010G019300--Sobic005G026100 Sobic001G339500 Sobic001G339500 Sobic010G019300--Sobic001G339500 Sobic003G369500 Sobic003G369500 Sobic010G019300--Sobic003G369500 Sobic007G227700 Sobic007G227700 Sobic002G001000--Sobic007G227700 Sobic002G001000--Sobic002G200700 Sobic002G001000--Sobic004G207400 Sobic010G140600 Sobic010G140600 Sobic002G001000--Sobic010G140600 Sobic001G072700 Sobic001G072700 Sobic002G001000--Sobic001G072700 Sobic010G013200 Sobic010G013200 Sobic002G001000--Sobic010G013200 Sobic002G001000--Sobic008G089900 Sobic003G403500 Sobic003G403500 Sobic002G001000--Sobic003G403500 Sobic002G001000--Sobic003G224100 Sobic003G224100--Sobic002G200700 Sobic006G011300 Sobic006G011300 Sobic003G224100--Sobic006G011300 Sobic003G224100--Sobic002G001000 Sobic003G224100--Sobic001G339500 Sobic006G175800 Sobic006G175800 Sobic003G224100--Sobic006G175800 Sobic006G064200 Sobic006G064200 Sobic003G224100--Sobic006G064200 Sobic003G224100--Sobic008G077500 Sobic001G413000 Sobic001G413000 Sobic003G224100--Sobic001G413000 Sobic006G258700 Sobic006G258700 Sobic003G224100--Sobic006G258700 Sobic001G243200 Sobic001G243200 Sobic004G103000--Sobic001G243200 Sobic006G259600 Sobic006G259600 Sobic004G103000--Sobic006G259600 Sobic008G167600 Sobic008G167600 Sobic004G103000--Sobic008G167600 Sobic001G352400 Sobic001G352400 Sobic004G103000--Sobic001G352400 Sobic001G476700 Sobic001G476700 Sobic004G103000--Sobic001G476700 Sobic004G169000 Sobic004G169000 Sobic004G103000--Sobic004G169000 Sobic010G074300 Sobic010G074300 Sobic004G103000--Sobic010G074300 Sobic001G333800 Sobic001G333800 Sobic004G103000--Sobic001G333800 Sobic005G106600 Sobic005G106600 Sobic004G103000--Sobic005G106600 Sobic004G219400 Sobic004G219400 Sobic001G498000--Sobic004G219400 Sobic006G130300 Sobic006G130300 Sobic001G498000--Sobic006G130300 Sobic003G391200 Sobic003G391200 Sobic001G498000--Sobic003G391200 Sobic008G115900 Sobic008G115900 Sobic001G498000--Sobic008G115900 Sobic002G382700 Sobic002G382700 Sobic001G498000--Sobic002G382700 Sobic001G017300 Sobic001G017300 Sobic001G498000--Sobic001G017300 Sobic006G158100 Sobic006G158100 Sobic001G498000--Sobic006G158100 Sobic006G221000 Sobic006G221000 Sobic001G498000--Sobic006G221000 Sobic004G082300 Sobic004G082300 Sobic001G498000--Sobic004G082300 Sobic002G417300 Sobic002G417300 Sobic003G339700--Sobic002G417300 Sobic003G381700 Sobic003G381700 Sobic003G339700--Sobic003G381700 Sobic008G187100 Sobic008G187100 Sobic003G339700--Sobic008G187100 Sobic007G146400 Sobic007G146400 Sobic003G339700--Sobic007G146400 Sobic001G160800 Sobic001G160800 Sobic003G339700--Sobic001G160800 Sobic003G339700--Sobic003G334000 Sobic001G057700 Sobic001G057700 Sobic003G339700--Sobic001G057700 Sobic009G069300 Sobic009G069300 Sobic003G339700--Sobic009G069300 Sobic006G066800 Sobic006G066800 Sobic003G339700--Sobic006G066800 Sobic006G083800 Sobic006G083800 Sobic008G089900--Sobic006G083800 Sobic009G162600 Sobic009G162600 Sobic008G089900--Sobic009G162600 Sobic008G089900--Sobic004G103000 Sobic002G204200 Sobic002G204200 Sobic008G089900--Sobic002G204200 Sobic008G089900--Sobic002G001000 Sobic001G414500 Sobic001G414500 Sobic008G089900--Sobic001G414500 Sobic008G089900--Sobic001G243200 Sobic009G187400 Sobic009G187400 Sobic008G089900--Sobic009G187400 Sobic008G089900--Sobic009G207300
Octagon: transcription factors


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