Gene annotation
Transcriptome id Sobic.004G246900.1
Synonym Sb04g028680
Functional annotation ankyrin repeat-containing protein, putative, expressed
UniProt C5XZ99
Pfam PF13962 PF12796
Panther DB PTHR24186 PTHR24186:SF9
NCBI CDD KOG4412; 26S proteasome regulatory complex, subunit PSMD10
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G01680 : Ankyrin repeat family protein
RAP-DB (Rice) LOC_Os02g50270.1 : ankyrin repeat-containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a053206 , Zm00025a032108 , Zm00025a013851 , Zm00025a032674 , Zm00025a004676 , Zm00025a021952 , Zm00025a055108 , Zm00025a034788 , Zm00025a049310
Brachypodium KQK02033
Barley HORVU6Hr1G074040.3 , HORVU6Hr1G074040.2
Wheat TraesCS6D02G277900 , TraesCS6B02G327600
Populus -


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cDNA sequences
Sobic.004G246900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G078900 transcription elongation factor SPT5 homolog 1, putative, expressed K15172: SUPT5H, transcription elongation factor SPT5
2 Sobic.001G102700 metalloendopeptidase/ metallopeptidase/ zinc ion binding protein, putative, expressed K01404: leishmanolysin
3 Sobic.002G134600 nucleic acid binding protein, putative, expressed -
4 Sobic.001G226700 WD repeat-containing protein, putative, expressed -
5 Sobic.010G079900 AT hook-containing DNA-binding protein, putative, expressed -
6 Sobic.001G088100 transcriptional adaptor, putative, expressed K11314: TADA2A, transcriptional adapter 2-alpha
7 Sobic.002G294800 cyclic nucleotide-gated ion channel, putative, expressed K05391: cyclic nucleotide gated channel, plant
8 Sobic.010G021500 WD domain, G-beta repeat domain containing protein, expressed -
9 Sobic.005G084400 la domain containing protein, expressed K15191: La-related protein 7
10 Sobic.006G032900 endonuclease/exonuclease/phosphatase family protein, putative, expressed -
11 Sobic.001G122832 - K13414: mitogen-activated protein kinase kinase kinase 1
12 Sobic.010G249100 ZOS8-11 - C2H2 zinc finger protein, expressed -
13 Sobic.001G260400 transcription initiation factor, putative, expressed K03136: TFIIE1, GTF2E1, TFA1, transcription initiation factor TFIIE subunit alpha
14 Sobic.001G332500 WRKY81, expressed -
15 Sobic.005G021500 protein of unknown function, DUF618 domain containing protein, expressed K15559: regulator of Ty1 transposition protein 103
16 Sobic.002G008500 Ser/Thr protein phosphatase family protein, putative, expressed -
17 Sobic.001G362200 DHHC zinc finger domain containing protein, expressed K18932: palmitoyltransferase
18 Sobic.009G233300 60S ribosomal protein L18a-1, putative, expressed -
19 Sobic.007G009400 bromodomain domain containing protein, expressed -
20 Sobic.010G167900 expressed protein K14376: poly(A) polymerase


Gene co-expression network
sample Sobic004G246900 Sobic004G246900 Sobic010G078900 Sobic010G078900 Sobic004G246900--Sobic010G078900 Sobic001G102700 Sobic001G102700 Sobic004G246900--Sobic001G102700 Sobic002G134600 Sobic002G134600 Sobic004G246900--Sobic002G134600 Sobic001G226700 Sobic001G226700 Sobic004G246900--Sobic001G226700 Sobic010G079900 Sobic010G079900 Sobic004G246900--Sobic010G079900 Sobic001G088100 Sobic001G088100 Sobic004G246900--Sobic001G088100 Sobic002G294800 Sobic002G294800 Sobic004G246900--Sobic002G294800 Sobic010G021500 Sobic010G021500 Sobic004G246900--Sobic010G021500 Sobic005G084400 Sobic005G084400 Sobic004G246900--Sobic005G084400 Sobic007G212300 Sobic007G212300 Sobic010G078900--Sobic007G212300 Sobic010G078900--Sobic004G246900 Sobic001G227400 Sobic001G227400 Sobic010G078900--Sobic001G227400 Sobic001G154900 Sobic001G154900 Sobic010G078900--Sobic001G154900 Sobic009G126300 Sobic009G126300 Sobic010G078900--Sobic009G126300 Sobic003G194500 Sobic003G194500 Sobic010G078900--Sobic003G194500 Sobic001G261501 Sobic001G261501 Sobic010G078900--Sobic001G261501 Sobic010G078900--Sobic001G088100 Sobic001G431000 Sobic001G431000 Sobic010G078900--Sobic001G431000 Sobic001G026500 Sobic001G026500 Sobic001G102700--Sobic001G026500 Sobic001G111600 Sobic001G111600 Sobic001G102700--Sobic001G111600 Sobic001G362200 Sobic001G362200 Sobic001G102700--Sobic001G362200 Sobic002G313400 Sobic002G313400 Sobic001G102700--Sobic002G313400 Sobic010G275500 Sobic010G275500 Sobic001G102700--Sobic010G275500 Sobic008G118200 Sobic008G118200 Sobic001G102700--Sobic008G118200 Sobic001G094900 Sobic001G094900 Sobic001G102700--Sobic001G094900 Sobic005G220000 Sobic005G220000 Sobic001G102700--Sobic005G220000 Sobic005G128400 Sobic005G128400 Sobic001G102700--Sobic005G128400 Sobic003G309200 Sobic003G309200 Sobic002G134600--Sobic003G309200 Sobic007G006900 Sobic007G006900 Sobic002G134600--Sobic007G006900 Sobic002G134600--Sobic001G226700 Sobic001G425800 Sobic001G425800 Sobic002G134600--Sobic001G425800 Sobic002G134600--Sobic002G294800 Sobic002G134600--Sobic001G362200 Sobic009G219000 Sobic009G219000 Sobic002G134600--Sobic009G219000 Sobic001G122832 Sobic001G122832 Sobic002G134600--Sobic001G122832 Sobic010G076300 Sobic010G076300 Sobic002G134600--Sobic010G076300 Sobic001G226700--Sobic002G294800 Sobic001G226700--Sobic002G134600 Sobic010G265300 Sobic010G265300 Sobic001G226700--Sobic010G265300 Sobic001G226700--Sobic001G362200 Sobic008G046500 Sobic008G046500 Sobic001G226700--Sobic008G046500 Sobic007G165900 Sobic007G165900 Sobic001G226700--Sobic007G165900 Sobic001G226700--Sobic004G246900 Sobic006G032900 Sobic006G032900 Sobic001G226700--Sobic006G032900 Sobic010G143800 Sobic010G143800 Sobic001G226700--Sobic010G143800 Sobic005G027400 Sobic005G027400 Sobic010G079900--Sobic005G027400 Sobic001G309400 Sobic001G309400 Sobic010G079900--Sobic001G309400 Sobic001G260400 Sobic001G260400 Sobic010G079900--Sobic001G260400 Sobic006G199200 Sobic006G199200 Sobic010G079900--Sobic006G199200 Sobic003G086900 Sobic003G086900 Sobic010G079900--Sobic003G086900 Sobic003G184699 Sobic003G184699 Sobic010G079900--Sobic003G184699 Sobic004G142900 Sobic004G142900 Sobic010G079900--Sobic004G142900 Sobic003G139900 Sobic003G139900 Sobic010G079900--Sobic003G139900 Sobic001G222250 Sobic001G222250 Sobic010G079900--Sobic001G222250 Sobic009G005500 Sobic009G005500 Sobic001G088100--Sobic009G005500 Sobic007G119200 Sobic007G119200 Sobic001G088100--Sobic007G119200 Sobic010G069100 Sobic010G069100 Sobic001G088100--Sobic010G069100 Sobic010G236400 Sobic010G236400 Sobic001G088100--Sobic010G236400 Sobic003G394300 Sobic003G394300 Sobic001G088100--Sobic003G394300 Sobic007G105100 Sobic007G105100 Sobic001G088100--Sobic007G105100 Sobic001G241200 Sobic001G241200 Sobic001G088100--Sobic001G241200 Sobic004G274200 Sobic004G274200 Sobic001G088100--Sobic004G274200 Sobic003G408600 Sobic003G408600 Sobic001G088100--Sobic003G408600 Sobic002G294800--Sobic005G027400 Sobic001G241100 Sobic001G241100 Sobic002G294800--Sobic001G241100 Sobic003G355900 Sobic003G355900 Sobic002G294800--Sobic003G355900 Sobic002G211800 Sobic002G211800 Sobic002G294800--Sobic002G211800 Sobic005G059800 Sobic005G059800 Sobic002G294800--Sobic005G059800 Sobic002G294800--Sobic001G261501 Sobic010G032900 Sobic010G032900 Sobic002G294800--Sobic010G032900 Sobic001G389100 Sobic001G389100 Sobic002G294800--Sobic001G389100 Sobic010G013200 Sobic010G013200 Sobic002G294800--Sobic010G013200 Sobic003G398700 Sobic003G398700 Sobic010G021500--Sobic003G398700 Sobic010G167900 Sobic010G167900 Sobic010G021500--Sobic010G167900 Sobic008G113100 Sobic008G113100 Sobic010G021500--Sobic008G113100 Sobic006G096900 Sobic006G096900 Sobic010G021500--Sobic006G096900 Sobic001G456900 Sobic001G456900 Sobic010G021500--Sobic001G456900 Sobic010G149200 Sobic010G149200 Sobic010G021500--Sobic010G149200 Sobic010G021500--Sobic005G027400 Sobic005G100700 Sobic005G100700 Sobic010G021500--Sobic005G100700 Sobic003G221900 Sobic003G221900 Sobic010G021500--Sobic003G221900 Sobic003G144950 Sobic003G144950 Sobic005G084400--Sobic003G144950 Sobic005G084400--Sobic004G246900 Sobic010G143200 Sobic010G143200 Sobic005G084400--Sobic010G143200 Sobic005G110475 Sobic005G110475 Sobic005G084400--Sobic005G110475 Sobic009G103600 Sobic009G103600 Sobic005G084400--Sobic009G103600 Sobic001G107900 Sobic001G107900 Sobic005G084400--Sobic001G107900 Sobic005G084400--Sobic002G313400 Sobic008G165700 Sobic008G165700 Sobic005G084400--Sobic008G165700 Sobic001G261900 Sobic001G261900 Sobic005G084400--Sobic001G261900
Octagon: transcription factors


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