Gene annotation
Transcriptome id Sobic.009G233300.1
Synonym Sb09g028580
Functional annotation 60S ribosomal protein L18a-1, putative, expressed
UniProt C5YVL0
Pfam -
Panther DB PTHR10052 PTHR10052:SF9
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G17080 : Ribosomal protein L18ae family
RAP-DB (Rice) LOC_Os05g49020.1 : 60S ribosomal protein L18a-1, putative, expressed
MaizeGDB (Corn) Zm00025a036614 , Zm00025a044580
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.009G233300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G273200 "PKc_like super family, protein kjinases, catalytic domain"(PubMedID : 29491869)@protein kinase family protein, putative, expressed K14500: BR-signaling kinase
2 Sobic.008G165700 expressed protein -
3 Sobic.002G187801 - K03134: transcription initiation factor TFIID subunit 10
4 Sobic.006G119800 leucine rich repeat containing protein, expressed -
5 Sobic.001G387600 ethylene-insensitive 3, putative, expressed K14514: ethylene-insensitive protein 3
6 Sobic.001G372500 NAD dependent epimerase/dehydratase family protein, putative, expressed K01784: galE, UDP-glucose 4-epimerase
7 Sobic.001G284800 histone H3, putative, expressed K11253: histone H3
8 Sobic.003G309900 OsFBX26 - F-box domain containing protein, expressed -
9 Sobic.003G176600 expressed protein -
10 Sobic.009G161600 - -
11 Sobic.008G189400 NBS-LRR disease resistance protein, putative, expressed -
12 Sobic.001G253700 protein kinase domain containing protein, expressed K04733: interleukin-1 receptor-associated kinase 4
13 Sobic.004G119100 expressed protein -
14 Sobic.001G298600 ribosomal L18p/L5e family protein, expressed -
15 Sobic.004G246900 ankyrin repeat-containing protein, putative, expressed -
16 Sobic.002G310200 expressed protein -
17 Sobic.008G062000 expressed protein K11878: PSMG4, proteasome assembly chaperone 4
18 Sobic.006G194500 expressed protein -
19 Sobic.009G137800 expressed protein -
20 Sobic.001G191600 TMS membrane protein/tumour differentially expressed protein, putative, expressed -


Gene co-expression network
sample Sobic009G233300 Sobic009G233300 Sobic006G273200 Sobic006G273200 Sobic009G233300--Sobic006G273200 Sobic008G165700 Sobic008G165700 Sobic009G233300--Sobic008G165700 Sobic002G187801 Sobic002G187801 Sobic009G233300--Sobic002G187801 Sobic006G119800 Sobic006G119800 Sobic009G233300--Sobic006G119800 Sobic001G387600 Sobic001G387600 Sobic009G233300--Sobic001G387600 Sobic001G372500 Sobic001G372500 Sobic009G233300--Sobic001G372500 Sobic001G284800 Sobic001G284800 Sobic009G233300--Sobic001G284800 Sobic003G309900 Sobic003G309900 Sobic009G233300--Sobic003G309900 Sobic003G176600 Sobic003G176600 Sobic009G233300--Sobic003G176600 Sobic001G497300 Sobic001G497300 Sobic006G273200--Sobic001G497300 Sobic009G065100 Sobic009G065100 Sobic006G273200--Sobic009G065100 Sobic004G205600 Sobic004G205600 Sobic006G273200--Sobic004G205600 Sobic007G096000 Sobic007G096000 Sobic006G273200--Sobic007G096000 Sobic006G273200--Sobic009G233300 Sobic008G062000 Sobic008G062000 Sobic006G273200--Sobic008G062000 Sobic006G237400 Sobic006G237400 Sobic006G273200--Sobic006G237400 Sobic007G205800 Sobic007G205800 Sobic006G273200--Sobic007G205800 Sobic006G273200--Sobic003G176600 Sobic008G165700--Sobic006G273200 Sobic008G165700--Sobic009G233300 Sobic010G268300 Sobic010G268300 Sobic008G165700--Sobic010G268300 Sobic008G165700--Sobic002G187801 Sobic002G365100 Sobic002G365100 Sobic008G165700--Sobic002G365100 Sobic001G191100 Sobic001G191100 Sobic008G165700--Sobic001G191100 Sobic003G123000 Sobic003G123000 Sobic008G165700--Sobic003G123000 Sobic003G018900 Sobic003G018900 Sobic008G165700--Sobic003G018900 Sobic003G000150 Sobic003G000150 Sobic008G165700--Sobic003G000150 Sobic002G187801--Sobic008G165700 Sobic001G253700 Sobic001G253700 Sobic002G187801--Sobic001G253700 Sobic002G187801--Sobic009G233300 Sobic002G187801--Sobic006G273200 Sobic002G187801--Sobic001G284800 Sobic004G003501 Sobic004G003501 Sobic002G187801--Sobic004G003501 Sobic002G187801--Sobic003G000150 Sobic002G092300 Sobic002G092300 Sobic002G187801--Sobic002G092300 Sobic002G187801--Sobic002G365100 Sobic001G281600 Sobic001G281600 Sobic006G119800--Sobic001G281600 Sobic006G119800--Sobic001G387600 Sobic004G121100 Sobic004G121100 Sobic006G119800--Sobic004G121100 Sobic007G019800 Sobic007G019800 Sobic006G119800--Sobic007G019800 Sobic006G119800--Sobic006G273200 Sobic010G068500 Sobic010G068500 Sobic006G119800--Sobic010G068500 Sobic004G301900 Sobic004G301900 Sobic006G119800--Sobic004G301900 Sobic004G119100 Sobic004G119100 Sobic006G119800--Sobic004G119100 Sobic006G119800--Sobic009G233300 Sobic001G387600--Sobic003G309900 Sobic001G387600--Sobic006G119800 Sobic003G413500 Sobic003G413500 Sobic001G387600--Sobic003G413500 Sobic001G387600--Sobic009G233300 Sobic001G191600 Sobic001G191600 Sobic001G387600--Sobic001G191600 Sobic008G146900 Sobic008G146900 Sobic001G387600--Sobic008G146900 Sobic001G222250 Sobic001G222250 Sobic001G387600--Sobic001G222250 Sobic001G387600--Sobic001G253700 Sobic010G009400 Sobic010G009400 Sobic001G387600--Sobic010G009400 Sobic001G372500--Sobic009G233300 Sobic007G120401 Sobic007G120401 Sobic001G372500--Sobic007G120401 Sobic001G372500--Sobic003G413500 Sobic009G137800 Sobic009G137800 Sobic001G372500--Sobic009G137800 Sobic001G372500--Sobic001G387600 Sobic007G189500 Sobic007G189500 Sobic001G372500--Sobic007G189500 Sobic001G372500--Sobic006G273200 Sobic001G372500--Sobic003G309900 Sobic006G194500 Sobic006G194500 Sobic001G372500--Sobic006G194500 Sobic009G161600 Sobic009G161600 Sobic001G284800--Sobic009G161600 Sobic001G284800--Sobic002G187801 Sobic001G133466 Sobic001G133466 Sobic001G284800--Sobic001G133466 Sobic003G088700 Sobic003G088700 Sobic001G284800--Sobic003G088700 Sobic004G135300 Sobic004G135300 Sobic001G284800--Sobic004G135300 Sobic001G284800--Sobic009G233300 Sobic001G111900 Sobic001G111900 Sobic001G284800--Sobic001G111900 Sobic001G504000 Sobic001G504000 Sobic001G284800--Sobic001G504000 Sobic001G284800--Sobic006G273200 Sobic003G309900--Sobic001G387600 Sobic004G083700 Sobic004G083700 Sobic003G309900--Sobic004G083700 Sobic007G108500 Sobic007G108500 Sobic003G309900--Sobic007G108500 Sobic003G309900--Sobic006G273200 Sobic010G056200 Sobic010G056200 Sobic003G309900--Sobic010G056200 Sobic010G280100 Sobic010G280100 Sobic003G309900--Sobic010G280100 Sobic003G309900--Sobic006G119800 Sobic006G228500 Sobic006G228500 Sobic003G309900--Sobic006G228500 Sobic003G309900--Sobic009G233300 Sobic003G176600--Sobic006G273200 Sobic003G176600--Sobic001G111900 Sobic001G298600 Sobic001G298600 Sobic003G176600--Sobic001G298600 Sobic003G176600--Sobic001G253700 Sobic007G132400 Sobic007G132400 Sobic003G176600--Sobic007G132400 Sobic003G176600--Sobic008G062000 Sobic008G067600 Sobic008G067600 Sobic003G176600--Sobic008G067600 Sobic003G176600--Sobic001G281600 Sobic002G310200 Sobic002G310200 Sobic003G176600--Sobic002G310200
Octagon: transcription factors


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