Gene annotation
Transcriptome id Sobic.010G165300.1
Synonym
Functional annotation kinesin motor domain containing protein, expressed
UniProt A0A194YJN5
Pfam PF00225
Panther DB PTHR24115:SF455 PTHR24115
NCBI CDD KOG0239; Kinesin (KAR3 subfamily)
KEGG Orthology K10406; kinesin family member C2/C3
Gene Ontology GO:0005871; kinesin complex GO:0003777microtubule motor activity GO:0005524ATP binding GO:0007018microtubule-based movement GO:0008017microtubule binding


Orthologs (automatic annotation)
TAIR AT1G73860 : P-loop containing nucleoside triphosphate hydrolases superfamily protein
RAP-DB (Rice) LOC_Os06g36080.1 : kinesin motor domain containing protein, expressed
MaizeGDB (Corn) Zm00025a020106 , Zm00025a042318 , Zm00025a040062 , Zm00025a027638
Brachypodium KQJ94131 , PNT75806 , PNT75807 , PNT75804 , PNT75805 , PNT75803
Barley HORVU0Hr1G015810.39 , HORVU0Hr1G015810.38 , HORVU0Hr1G015810.31 , HORVU0Hr1G015810.30 , HORVU0Hr1G015810.33 , HORVU0Hr1G015810.32 , HORVU0Hr1G015810.35 , HORVU0Hr1G015810.34 , HORVU0Hr1G015810.37 , HORVU0Hr1G015810.36 , HORVU7Hr1G088620.15 , HORVU7Hr1G088620.14 , HORVU7Hr1G088620.17 , HORVU7Hr1G088620.16 , HORVU7Hr1G088620.11 , HORVU7Hr1G088620.10 , HORVU7Hr1G088620.13 , HORVU7Hr1G088620.12 , HORVU7Hr1G088620.19 , HORVU7Hr1G088620.18 , HORVU7Hr1G088620.7 , HORVU7Hr1G088620.20 , HORVU7Hr1G088620.21 , HORVU0Hr1G015810.28 , HORVU0Hr1G015810.29 , HORVU0Hr1G015810.26 , HORVU0Hr1G015810.27 , HORVU0Hr1G015810.24 , HORVU0Hr1G015810.22 , HORVU0Hr1G015810.23 , HORVU0Hr1G015810.20 , HORVU0Hr1G015810.21 , HORVU0Hr1G015810.7 , HORVU0Hr1G015810.6 , HORVU0Hr1G015810.3 , HORVU0Hr1G015810.2 , HORVU7Hr1G088620.1 , HORVU7Hr1G088620.3 , HORVU7Hr1G088620.2 , HORVU7Hr1G088620.5 , HORVU7Hr1G088620.4 , HORVU7Hr1G088620.6 , HORVU7Hr1G088620.9 , HORVU7Hr1G088620.8 , HORVU7Hr1G088620.42 , HORVU7Hr1G088620.43 , HORVU7Hr1G088620.40 , HORVU7Hr1G088620.41 , HORVU0Hr1G015810.17 , HORVU0Hr1G015810.16 , HORVU0Hr1G015810.15 , HORVU0Hr1G015810.14 , HORVU0Hr1G015810.13 , HORVU0Hr1G015810.12 , HORVU0Hr1G015810.11 , HORVU0Hr1G015810.10 , HORVU0Hr1G015810.19 , HORVU0Hr1G015810.18 , HORVU7Hr1G088620.33 , HORVU7Hr1G088620.32 , HORVU7Hr1G088620.31 , HORVU7Hr1G088620.30 , HORVU7Hr1G088620.37 , HORVU7Hr1G088620.36 , HORVU7Hr1G088620.35 , HORVU7Hr1G088620.34 , HORVU7Hr1G088620.39 , HORVU7Hr1G088620.38 , HORVU0Hr1G015810.48 , HORVU0Hr1G015810.40 , HORVU0Hr1G015810.41 , HORVU0Hr1G015810.42 , HORVU0Hr1G015810.43 , HORVU0Hr1G015810.44 , HORVU0Hr1G015810.45 , HORVU0Hr1G015810.46 , HORVU0Hr1G015810.47 , HORVU0Hr1G015810.9 , HORVU0Hr1G015810.8 , HORVU0Hr1G015810.1 , HORVU0Hr1G015810.25 , HORVU0Hr1G015810.5 , HORVU0Hr1G015810.4 , HORVU7Hr1G088620.22 , HORVU7Hr1G088620.23 , HORVU7Hr1G088620.24 , HORVU7Hr1G088620.25 , HORVU7Hr1G088620.26 , HORVU7Hr1G088620.27 , HORVU7Hr1G088620.28 , HORVU7Hr1G088620.29
Wheat TraesCS6A02G188600 , TraesCS6A02G188600 , TraesCS6A02G188600 , TraesCS6A02G188600 , TraesCS7A02G356000 , TraesCS6B02G215900 , TraesCS7D02G366700 , TraesCS7D02G366700 , TraesCS7D02G366700 , TraesCS7B02G271700 , TraesCS7B02G271700 , TraesCS6D02G177300 , TraesCS6D02G177300
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G140500 bg55, putative, expressed -
2 Sobic.002G028700 succinate dehydrogenase flavoprotein subunit,mitochondrial precursor, putative, expressed K00234: SDHA, succinate dehydrogenase (ubiquinone) flavoprotein subunit
3 Sobic.003G397500 expressed protein -
4 Sobic.006G175900 acyl-CoA thioesterase 2, putative, expressed -
5 Sobic.003G336100 auxin efflux carrier component, putative, expressed -
6 Sobic.003G036600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@myb-related transcription activator, putative, expressed -
7 Sobic.001G426800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RNA recognition motif containing protein, expressed -
8 Sobic.003G126300 OsRhmbd2 - Putative Rhomboid homologue, expressed -
9 Sobic.001G409300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@phosphatidylinositol transfer protein alpha isoform, putative, expressed -
10 Sobic.004G222800 expressed protein -
11 Sobic.001G522100 transporter, monovalent cation:proton antiporter-2 family, putative, expressed -
12 Sobic.003G331400 expressed protein -
13 Sobic.003G281900 regulator of chromosome condensation, putative, expressed -
14 Sobic.009G069300 actin binding protein family(PubMedID : 26465154)@AR791, putative, expressed -
15 Sobic.003G374700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Sad1 / UNC-like C-terminal domain containing protein, putative, expressed -
16 Sobic.005G195600 adenylyl-sulfate kinase, putative, expressed K00860: adenylylsulfate kinase
17 Sobic.008G075600 - -
18 Sobic.003G059300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@verticillium wilt disease resistance protein, putative, expressed -
19 Sobic.003G272400 DUF292 domain containing protein, expressed -
20 Sobic.006G064800 heparan-alpha-glucosaminide N-acetyltransferase, putative, expressed -


Gene co-expression network
sample Sobic010G165300 Sobic010G165300 Sobic010G140500 Sobic010G140500 Sobic010G165300--Sobic010G140500 Sobic002G028700 Sobic002G028700 Sobic010G165300--Sobic002G028700 Sobic003G397500 Sobic003G397500 Sobic010G165300--Sobic003G397500 Sobic006G175900 Sobic006G175900 Sobic010G165300--Sobic006G175900 Sobic003G336100 Sobic003G336100 Sobic010G165300--Sobic003G336100 Sobic003G036600 Sobic003G036600 Sobic010G165300--Sobic003G036600 Sobic001G426800 Sobic001G426800 Sobic010G165300--Sobic001G426800 Sobic003G126300 Sobic003G126300 Sobic010G165300--Sobic003G126300 Sobic001G409300 Sobic001G409300 Sobic010G165300--Sobic001G409300 Sobic003G331400 Sobic003G331400 Sobic010G140500--Sobic003G331400 Sobic002G306000 Sobic002G306000 Sobic010G140500--Sobic002G306000 Sobic005G209500 Sobic005G209500 Sobic010G140500--Sobic005G209500 Sobic010G140500--Sobic010G165300 Sobic003G367300 Sobic003G367300 Sobic010G140500--Sobic003G367300 Sobic010G140500--Sobic003G126300 Sobic009G079300 Sobic009G079300 Sobic010G140500--Sobic009G079300 Sobic003G272400 Sobic003G272400 Sobic010G140500--Sobic003G272400 Sobic003G309200 Sobic003G309200 Sobic010G140500--Sobic003G309200 Sobic001G522100 Sobic001G522100 Sobic002G028700--Sobic001G522100 Sobic004G100200 Sobic004G100200 Sobic002G028700--Sobic004G100200 Sobic003G209200 Sobic003G209200 Sobic002G028700--Sobic003G209200 Sobic009G077600 Sobic009G077600 Sobic002G028700--Sobic009G077600 Sobic007G075500 Sobic007G075500 Sobic002G028700--Sobic007G075500 Sobic003G346400 Sobic003G346400 Sobic002G028700--Sobic003G346400 Sobic004G228800 Sobic004G228800 Sobic002G028700--Sobic004G228800 Sobic006G260500 Sobic006G260500 Sobic002G028700--Sobic006G260500 Sobic006G077300 Sobic006G077300 Sobic002G028700--Sobic006G077300 Sobic003G252400 Sobic003G252400 Sobic003G397500--Sobic003G252400 Sobic008G075600 Sobic008G075600 Sobic003G397500--Sobic008G075600 Sobic004G211301 Sobic004G211301 Sobic003G397500--Sobic004G211301 Sobic002G331450 Sobic002G331450 Sobic003G397500--Sobic002G331450 Sobic010G026500 Sobic010G026500 Sobic003G397500--Sobic010G026500 Sobic002G110200 Sobic002G110200 Sobic003G397500--Sobic002G110200 Sobic002G229600 Sobic002G229600 Sobic003G397500--Sobic002G229600 Sobic008G031300 Sobic008G031300 Sobic003G397500--Sobic008G031300 Sobic010G085400 Sobic010G085400 Sobic003G397500--Sobic010G085400 Sobic007G137600 Sobic007G137600 Sobic006G175900--Sobic007G137600 Sobic006G175900--Sobic010G165300 Sobic009G169400 Sobic009G169400 Sobic006G175900--Sobic009G169400 Sobic006G281800 Sobic006G281800 Sobic006G175900--Sobic006G281800 Sobic006G207900 Sobic006G207900 Sobic006G175900--Sobic006G207900 Sobic009G143700 Sobic009G143700 Sobic006G175900--Sobic009G143700 Sobic003G002400 Sobic003G002400 Sobic006G175900--Sobic003G002400 Sobic001G328200 Sobic001G328200 Sobic006G175900--Sobic001G328200 Sobic003G362500 Sobic003G362500 Sobic006G175900--Sobic003G362500 Sobic007G196900 Sobic007G196900 Sobic003G336100--Sobic007G196900 Sobic003G198200 Sobic003G198200 Sobic003G336100--Sobic003G198200 Sobic004G124500 Sobic004G124500 Sobic003G336100--Sobic004G124500 Sobic003G336100--Sobic003G272400 Sobic005G121200 Sobic005G121200 Sobic003G336100--Sobic005G121200 Sobic003G336100--Sobic006G207900 Sobic003G198150 Sobic003G198150 Sobic003G336100--Sobic003G198150 Sobic003G229000 Sobic003G229000 Sobic003G336100--Sobic003G229000 Sobic003G336100--Sobic010G165300 Sobic002G148700 Sobic002G148700 Sobic003G036600--Sobic002G148700 Sobic005G087900 Sobic005G087900 Sobic003G036600--Sobic005G087900 Sobic001G521500 Sobic001G521500 Sobic003G036600--Sobic001G521500 Sobic010G260300 Sobic010G260300 Sobic003G036600--Sobic010G260300 Sobic003G036600--Sobic009G079300 Sobic003G036600--Sobic003G397500 Sobic003G036600--Sobic001G409300 Sobic003G036600--Sobic003G252400 Sobic003G036600--Sobic002G229600 Sobic009G183101 Sobic009G183101 Sobic001G426800--Sobic009G183101 Sobic009G069300 Sobic009G069300 Sobic001G426800--Sobic009G069300 Sobic003G339700 Sobic003G339700 Sobic001G426800--Sobic003G339700 Sobic009G180500 Sobic009G180500 Sobic001G426800--Sobic009G180500 Sobic004G276200 Sobic004G276200 Sobic001G426800--Sobic004G276200 Sobic009G200800 Sobic009G200800 Sobic001G426800--Sobic009G200800 Sobic006G150400 Sobic006G150400 Sobic001G426800--Sobic006G150400 Sobic004G323400 Sobic004G323400 Sobic001G426800--Sobic004G323400 Sobic003G313900 Sobic003G313900 Sobic001G426800--Sobic003G313900 Sobic003G126300--Sobic004G228800 Sobic003G126300--Sobic009G079300 Sobic004G004200 Sobic004G004200 Sobic003G126300--Sobic004G004200 Sobic008G110600 Sobic008G110600 Sobic003G126300--Sobic008G110600 Sobic004G261600 Sobic004G261600 Sobic003G126300--Sobic004G261600 Sobic006G034000 Sobic006G034000 Sobic003G126300--Sobic006G034000 Sobic003G126300--Sobic003G272400 Sobic007G056600 Sobic007G056600 Sobic003G126300--Sobic007G056600 Sobic006G033200 Sobic006G033200 Sobic003G126300--Sobic006G033200 Sobic008G059100 Sobic008G059100 Sobic001G409300--Sobic008G059100 Sobic004G211900 Sobic004G211900 Sobic001G409300--Sobic004G211900 Sobic003G242000 Sobic003G242000 Sobic001G409300--Sobic003G242000 Sobic001G217400 Sobic001G217400 Sobic001G409300--Sobic001G217400 Sobic010G272200 Sobic010G272200 Sobic001G409300--Sobic010G272200 Sobic003G051600 Sobic003G051600 Sobic001G409300--Sobic003G051600 Sobic003G269800 Sobic003G269800 Sobic001G409300--Sobic003G269800 Sobic001G409300--Sobic003G397500 Sobic009G136100 Sobic009G136100 Sobic001G409300--Sobic009G136100
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.