Gene annotation
Transcriptome id Sobic.008G075600.1
Synonym
Functional annotation -
UniProt A0A1B6PC20
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G325600 ankyrin repeat family protein, putative, expressed -
2 Sobic.007G143100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@- -
3 Sobic.007G169600 L1P family of ribosomal proteins domain containing protein, expressed K02865: RP-L10Ae, large subunit ribosomal protein L10Ae
4 Sobic.009G076700 expressed protein -
5 Sobic.002G331450 - -
6 Sobic.005G016900 CRP11 - Cysteine-rich family protein precursor, expressed -
7 Sobic.007G143200 Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@- -
8 Sobic.003G397500 expressed protein -
9 Sobic.007G073750 - -
10 Sobic.002G037400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@9-cis-epoxycarotenoid dioxygenase 1, chloroplast precursor, putative, expressed K09840: 9-cis-epoxycarotenoid dioxygenase
11 Sobic.009G064400 cytochrome P450 71A1, putative, expressed -
12 Sobic.003G397400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@expressed protein -
13 Sobic.001G075101 - -
14 Sobic.003G083000 glycosyl hydrolase family 10 protein, putative, expressed -
15 Sobic.006G203000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@immutans protein, putative, expressed K17893: AOX1, ubiquinol oxidase
16 Sobic.010G026500 Up-reguralion under drought(PubMedID : 24916767)@expressed protein -
17 Sobic.002G110200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
18 Sobic.006G026400 - -
19 Sobic.003G252400 drought induced 19 protein, putative, expressed -
20 Sobic.007G153001 - -


Gene co-expression network
sample Sobic008G075600 Sobic008G075600 Sobic002G325600 Sobic002G325600 Sobic008G075600--Sobic002G325600 Sobic007G143100 Sobic007G143100 Sobic008G075600--Sobic007G143100 Sobic007G169600 Sobic007G169600 Sobic008G075600--Sobic007G169600 Sobic009G076700 Sobic009G076700 Sobic008G075600--Sobic009G076700 Sobic002G331450 Sobic002G331450 Sobic008G075600--Sobic002G331450 Sobic005G016900 Sobic005G016900 Sobic008G075600--Sobic005G016900 Sobic007G143200 Sobic007G143200 Sobic008G075600--Sobic007G143200 Sobic003G397500 Sobic003G397500 Sobic008G075600--Sobic003G397500 Sobic007G073750 Sobic007G073750 Sobic008G075600--Sobic007G073750 Sobic002G325600--Sobic007G169600 Sobic002G325600--Sobic002G331450 Sobic001G075101 Sobic001G075101 Sobic002G325600--Sobic001G075101 Sobic003G083000 Sobic003G083000 Sobic002G325600--Sobic003G083000 Sobic006G203000 Sobic006G203000 Sobic002G325600--Sobic006G203000 Sobic002G037400 Sobic002G037400 Sobic002G325600--Sobic002G037400 Sobic001G509400 Sobic001G509400 Sobic002G325600--Sobic001G509400 Sobic002G325600--Sobic005G016900 Sobic002G325600--Sobic007G143100 Sobic007G143100--Sobic007G143200 Sobic007G143100--Sobic005G016900 Sobic007G143100--Sobic007G073750 Sobic007G143100--Sobic009G076700 Sobic003G397400 Sobic003G397400 Sobic007G143100--Sobic003G397400 Sobic007G143100--Sobic007G169600 Sobic007G143100--Sobic003G083000 Sobic007G143100--Sobic002G037400 Sobic007G143100--Sobic001G075101 Sobic007G169600--Sobic001G075101 Sobic007G169600--Sobic003G083000 Sobic007G169600--Sobic002G331450 Sobic007G169600--Sobic002G037400 Sobic007G169600--Sobic006G203000 Sobic007G169600--Sobic005G016900 Sobic007G169600--Sobic007G143100 Sobic007G169600--Sobic002G325600 Sobic007G169600--Sobic007G143200 Sobic009G076700--Sobic007G143100 Sobic009G076700--Sobic007G073750 Sobic009G076700--Sobic005G016900 Sobic009G076700--Sobic007G143200 Sobic009G076700--Sobic003G397400 Sobic009G076700--Sobic007G169600 Sobic009G076700--Sobic002G037400 Sobic009G076700--Sobic003G083000 Sobic010G253500 Sobic010G253500 Sobic009G076700--Sobic010G253500 Sobic002G331450--Sobic007G169600 Sobic002G331450--Sobic001G075101 Sobic002G331450--Sobic002G325600 Sobic002G331450--Sobic003G083000 Sobic002G110200 Sobic002G110200 Sobic002G331450--Sobic002G110200 Sobic002G331450--Sobic006G203000 Sobic002G331450--Sobic002G037400 Sobic009G128300 Sobic009G128300 Sobic002G331450--Sobic009G128300 Sobic002G182800 Sobic002G182800 Sobic002G331450--Sobic002G182800 Sobic005G016900--Sobic007G143100 Sobic005G016900--Sobic007G073750 Sobic005G016900--Sobic007G143200 Sobic005G016900--Sobic009G076700 Sobic005G016900--Sobic003G397400 Sobic005G016900--Sobic007G169600 Sobic005G016900--Sobic003G083000 Sobic005G016900--Sobic002G037400 Sobic005G016900--Sobic001G075101 Sobic007G143200--Sobic007G143100 Sobic007G143200--Sobic005G016900 Sobic007G143200--Sobic007G073750 Sobic007G143200--Sobic009G076700 Sobic007G143200--Sobic003G397400 Sobic007G143200--Sobic007G169600 Sobic007G143200--Sobic003G083000 Sobic007G143200--Sobic002G037400 Sobic007G143200--Sobic001G075101 Sobic003G252400 Sobic003G252400 Sobic003G397500--Sobic003G252400 Sobic003G397500--Sobic008G075600 Sobic004G211301 Sobic004G211301 Sobic003G397500--Sobic004G211301 Sobic003G397500--Sobic002G331450 Sobic010G026500 Sobic010G026500 Sobic003G397500--Sobic010G026500 Sobic003G397500--Sobic002G110200 Sobic002G229600 Sobic002G229600 Sobic003G397500--Sobic002G229600 Sobic008G031300 Sobic008G031300 Sobic003G397500--Sobic008G031300 Sobic010G085400 Sobic010G085400 Sobic003G397500--Sobic010G085400 Sobic007G073750--Sobic005G016900 Sobic007G073750--Sobic007G143100 Sobic007G073750--Sobic007G143200 Sobic007G073750--Sobic009G076700 Sobic007G073750--Sobic003G397400 Sobic007G073750--Sobic010G253500 Sobic007G073750--Sobic007G169600 Sobic007G073750--Sobic003G083000 Sobic001G210250 Sobic001G210250 Sobic007G073750--Sobic001G210250
Octagon: transcription factors


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