Gene annotation
Transcriptome id Sobic.006G175900.1
Synonym
Functional annotation acyl-CoA thioesterase 2, putative, expressed
UniProt A0A125QUF8 , A0A1B6PMK4 , C6JSI6
Pfam PF00027 PF02551
Panther DB PTHR11066 PTHR11066:SF34
NCBI CDD KOG3016; Acyl-CoA thioesterase
KEGG Orthology -
Gene Ontology GO:0006637; acyl-CoA metabolic process


Orthologs (automatic annotation)
TAIR AT1G01710 : Acyl-CoA thioesterase family protein
RAP-DB (Rice) LOC_Os04g47120.1 : acyl-CoA thioesterase 2, putative, expressed
MaizeGDB (Corn) Zm00025a056834
Brachypodium KQJ84003
Barley HORVU2Hr1G096760.10 , HORVU2Hr1G096760.11 , HORVU2Hr1G096760.12 , HORVU2Hr1G096760.13 , HORVU2Hr1G096760.14 , HORVU2Hr1G096760.15 , HORVU2Hr1G096760.16 , HORVU2Hr1G096760.17 , HORVU2Hr1G096760.18 , HORVU2Hr1G096760.19 , HORVU2Hr1G096760.21 , HORVU2Hr1G096760.20 , HORVU2Hr1G096760.22 , HORVU2Hr1G096760.2 , HORVU2Hr1G096760.3 , HORVU2Hr1G096760.1 , HORVU2Hr1G096760.6 , HORVU2Hr1G096760.7 , HORVU2Hr1G096760.4 , HORVU2Hr1G096760.5 , HORVU2Hr1G096760.8 , HORVU2Hr1G096760.9
Wheat TraesCS2B02G427700 , TraesCS2B02G427700 , TraesCS2D02G405600 , TraesCS2D02G405600 , TraesCS2D02G405600 , TraesCS2A02G409200 , TraesCS2A02G409200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G137600 NADP-dependent malate dehydrogenase(PubMedID : 26976818)@lactate/malate dehydrogenase, putative, expressed K00026: malate dehydrogenase
2 Sobic.010G165300 kinesin motor domain containing protein, expressed K10406: kinesin family member C2/C3
3 Sobic.009G169400 expressed protein -
4 Sobic.006G281800 ras-related protein, putative, expressed K07910: Ras-related protein Rab-18
5 Sobic.006G207900 DNA binding protein, putative, expressed -
6 Sobic.009G143700 no apical meristem protein, putative, expressed -
7 Sobic.003G002400 dnaJ domain containing protein, expressed K09510: DnaJ homolog subfamily B member 4
8 Sobic.001G328200 interferon-related developmental regulator, putative, expressed -
9 Sobic.003G362500 WD domain, G-beta repeat domain containing protein, expressed K10570: ERCC8, CKN1, DNA excision repair protein ERCC-8
10 Sobic.007G075500 UDP-glucose Pyrophosphorylase(PubMedID : 26616172)@UTP--glucose-1-phosphate uridylyltransferase, putative, expressed K00972: UDP-N-acetylglucosamine/UDP-N-acetylgalactosamine diphosphorylase
11 Sobic.006G090000 DUF1771 domain containing protein, putative, expressed -
12 Sobic.001G122500 SNARE associated Golgi protein, putative, expressed -
13 Sobic.006G217300 NAD dependent epimerase/dehydratase family domain containing protein, expressed K12448: UXE, UDP-arabinose 4-epimerase
14 Sobic.003G373500 phosphatidylinositol-4-phosphate 5-Kinase, putative, expressed K00921: PIKFYVE, 1-phosphatidylinositol-3-phosphate 5-kinase
15 Sobic.007G124200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@uncharacterized glycosyl hydrolase Rv2006/MT2062, putative, expressed K01087: trehalose 6-phosphate phosphatase
16 Sobic.004G222800 expressed protein -
17 Sobic.006G201800 scramblase, putative, expressed -
18 Sobic.001G414500 ankyrin repeat-containing protein, putative, expressed -
19 Sobic.004G274400 GCN5-related N-acetyltransferase, putative, expressed -
20 Sobic.003G367300 actin, putative, expressed K10355: actin, other eukaryote


Gene co-expression network
sample Sobic006G175900 Sobic006G175900 Sobic007G137600 Sobic007G137600 Sobic006G175900--Sobic007G137600 Sobic010G165300 Sobic010G165300 Sobic006G175900--Sobic010G165300 Sobic009G169400 Sobic009G169400 Sobic006G175900--Sobic009G169400 Sobic006G281800 Sobic006G281800 Sobic006G175900--Sobic006G281800 Sobic006G207900 Sobic006G207900 Sobic006G175900--Sobic006G207900 Sobic009G143700 Sobic009G143700 Sobic006G175900--Sobic009G143700 Sobic003G002400 Sobic003G002400 Sobic006G175900--Sobic003G002400 Sobic001G328200 Sobic001G328200 Sobic006G175900--Sobic001G328200 Sobic003G362500 Sobic003G362500 Sobic006G175900--Sobic003G362500 Sobic004G057200 Sobic004G057200 Sobic007G137600--Sobic004G057200 Sobic007G137600--Sobic006G175900 Sobic003G373500 Sobic003G373500 Sobic007G137600--Sobic003G373500 Sobic002G358400 Sobic002G358400 Sobic007G137600--Sobic002G358400 Sobic001G357300 Sobic001G357300 Sobic007G137600--Sobic001G357300 Sobic010G027000 Sobic010G027000 Sobic007G137600--Sobic010G027000 Sobic006G178000 Sobic006G178000 Sobic007G137600--Sobic006G178000 Sobic004G121300 Sobic004G121300 Sobic007G137600--Sobic004G121300 Sobic001G082000 Sobic001G082000 Sobic007G137600--Sobic001G082000 Sobic010G140500 Sobic010G140500 Sobic010G165300--Sobic010G140500 Sobic002G028700 Sobic002G028700 Sobic010G165300--Sobic002G028700 Sobic003G397500 Sobic003G397500 Sobic010G165300--Sobic003G397500 Sobic010G165300--Sobic006G175900 Sobic003G336100 Sobic003G336100 Sobic010G165300--Sobic003G336100 Sobic003G036600 Sobic003G036600 Sobic010G165300--Sobic003G036600 Sobic001G426800 Sobic001G426800 Sobic010G165300--Sobic001G426800 Sobic003G126300 Sobic003G126300 Sobic010G165300--Sobic003G126300 Sobic001G409300 Sobic001G409300 Sobic010G165300--Sobic001G409300 Sobic009G169400--Sobic006G207900 Sobic007G169200 Sobic007G169200 Sobic009G169400--Sobic007G169200 Sobic004G162200 Sobic004G162200 Sobic009G169400--Sobic004G162200 Sobic004G278000 Sobic004G278000 Sobic009G169400--Sobic004G278000 Sobic002G197600 Sobic002G197600 Sobic009G169400--Sobic002G197600 Sobic001G122500 Sobic001G122500 Sobic009G169400--Sobic001G122500 Sobic008G059000 Sobic008G059000 Sobic009G169400--Sobic008G059000 Sobic004G176900 Sobic004G176900 Sobic009G169400--Sobic004G176900 Sobic004G244100 Sobic004G244100 Sobic009G169400--Sobic004G244100 Sobic009G225000 Sobic009G225000 Sobic006G281800--Sobic009G225000 Sobic003G349300 Sobic003G349300 Sobic006G281800--Sobic003G349300 Sobic001G283200 Sobic001G283200 Sobic006G281800--Sobic001G283200 Sobic004G181900 Sobic004G181900 Sobic006G281800--Sobic004G181900 Sobic001G206900 Sobic001G206900 Sobic006G281800--Sobic001G206900 Sobic002G385900 Sobic002G385900 Sobic006G281800--Sobic002G385900 Sobic004G206700 Sobic004G206700 Sobic006G281800--Sobic004G206700 Sobic010G064600 Sobic010G064600 Sobic006G281800--Sobic010G064600 Sobic003G312200 Sobic003G312200 Sobic006G281800--Sobic003G312200 Sobic006G217300 Sobic006G217300 Sobic006G207900--Sobic006G217300 Sobic006G207900--Sobic009G169400 Sobic003G272400 Sobic003G272400 Sobic006G207900--Sobic003G272400 Sobic003G043800 Sobic003G043800 Sobic006G207900--Sobic003G043800 Sobic006G207900--Sobic003G126300 Sobic001G312500 Sobic001G312500 Sobic006G207900--Sobic001G312500 Sobic004G207900 Sobic004G207900 Sobic006G207900--Sobic004G207900 Sobic006G207900--Sobic001G122500 Sobic004G124500 Sobic004G124500 Sobic006G207900--Sobic004G124500 Sobic002G311100 Sobic002G311100 Sobic009G143700--Sobic002G311100 Sobic001G333100 Sobic001G333100 Sobic009G143700--Sobic001G333100 Sobic009G109925 Sobic009G109925 Sobic009G143700--Sobic009G109925 Sobic010G004100 Sobic010G004100 Sobic009G143700--Sobic010G004100 Sobic003G110000 Sobic003G110000 Sobic009G143700--Sobic003G110000 Sobic009G139900 Sobic009G139900 Sobic009G143700--Sobic009G139900 Sobic003G264100 Sobic003G264100 Sobic009G143700--Sobic003G264100 Sobic007G054800 Sobic007G054800 Sobic009G143700--Sobic007G054800 Sobic003G194100 Sobic003G194100 Sobic009G143700--Sobic003G194100 Sobic004G350300 Sobic004G350300 Sobic003G002400--Sobic004G350300 Sobic004G274400 Sobic004G274400 Sobic003G002400--Sobic004G274400 Sobic001G434900 Sobic001G434900 Sobic003G002400--Sobic001G434900 Sobic002G045300 Sobic002G045300 Sobic003G002400--Sobic002G045300 Sobic003G220600 Sobic003G220600 Sobic003G002400--Sobic003G220600 Sobic004G271700 Sobic004G271700 Sobic003G002400--Sobic004G271700 Sobic003G002400--Sobic001G122500 Sobic006G033200 Sobic006G033200 Sobic003G002400--Sobic006G033200 Sobic010G101500 Sobic010G101500 Sobic003G002400--Sobic010G101500 Sobic010G188100 Sobic010G188100 Sobic001G328200--Sobic010G188100 Sobic009G219900 Sobic009G219900 Sobic001G328200--Sobic009G219900 Sobic006G092400 Sobic006G092400 Sobic001G328200--Sobic006G092400 Sobic001G328200--Sobic010G101500 Sobic001G328200--Sobic003G002400 Sobic001G328200--Sobic003G312200 Sobic002G358800 Sobic002G358800 Sobic001G328200--Sobic002G358800 Sobic007G139700 Sobic007G139700 Sobic001G328200--Sobic007G139700 Sobic002G166900 Sobic002G166900 Sobic001G328200--Sobic002G166900 Sobic003G274800 Sobic003G274800 Sobic003G362500--Sobic003G274800 Sobic003G077900 Sobic003G077900 Sobic003G362500--Sobic003G077900 Sobic006G213800 Sobic006G213800 Sobic003G362500--Sobic006G213800 Sobic001G014800 Sobic001G014800 Sobic003G362500--Sobic001G014800 Sobic006G201800 Sobic006G201800 Sobic003G362500--Sobic006G201800 Sobic003G261500 Sobic003G261500 Sobic003G362500--Sobic003G261500 Sobic010G000900 Sobic010G000900 Sobic003G362500--Sobic010G000900 Sobic005G111900 Sobic005G111900 Sobic003G362500--Sobic005G111900 Sobic003G217400 Sobic003G217400 Sobic003G362500--Sobic003G217400
Octagon: transcription factors


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