Gene annotation
Transcriptome id Sobic.002G076866.1
Synonym -
Functional annotation -
UniProt A0A1W0W2V1
Pfam PF04782
Panther DB PTHR21450 PTHR21450:SF18
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G25590 : Protein of unknown function (DUF630 and DUF632)
RAP-DB (Rice) LOC_Os07g11070.1 : DUF630/DUF632 domains containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a045401
Brachypodium -
Barley -
Wheat TraesCS2B02G181100 , TraesCS2D02G161700
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G105500 heat shock protein DnaJ, putative, expressed -
2 Sobic.004G031600 cyclin-T1-1, putative, expressed K15188: cyclin T
3 Sobic.004G274400 GCN5-related N-acetyltransferase, putative, expressed -
4 Sobic.009G219000 ANTH/ENTH domain containing protein, putative, expressed -
5 Sobic.003G407200 calmodulin-binding transcription activator, putative, expressed -
6 Sobic.002G306000 calmodulin-binding transcription activator 5, putative, expressed -
7 Sobic.010G105600 RNA recognition motif containing protein, putative, expressed K12881: THOC4, THO complex subunit 4
8 Sobic.002G040700 tetratricopeptide repeat, putative, expressed -
9 Sobic.008G016900 glucosamine--fructose-6-phosphate aminotransferase 1, putative, expressed K00820: glmS, glutamine---fructose-6-phosphate transaminase (isomerizing)
10 Sobic.003G043800 BT1 family protein, putative, expressed -
11 Sobic.010G068500 cyclic nucleotide-gated ion channel 14, putative, expressed K05391: cyclic nucleotide gated channel, plant
12 Sobic.009G160200 prenylated rab acceptor, putative, expressed -
13 Sobic.010G026300 hypersensitive-induced response protein, putative, expressed -
14 Sobic.001G031600 calmodulin binding protein, putative, expressed -
15 Sobic.003G273500 expressed protein -
16 Sobic.009G195900 OsFBT9 - F-box and tubby domain containing protein, expressed -
17 Sobic.003G328600 proline-rich family protein, putative, expressed -
18 Sobic.006G263100 expressed protein -
19 Sobic.001G067900 clathrin adaptor complex small chain domain containing protein, expressed K12394: AP-1 complex subunit sigma 1/2
20 Sobic.006G055400 hydroxyproline-rich glycoprotein family protein, putative, expressed -


Gene co-expression network
sample Sobic002G076866 Sobic002G076866 Sobic001G105500 Sobic001G105500 Sobic002G076866--Sobic001G105500 Sobic004G031600 Sobic004G031600 Sobic002G076866--Sobic004G031600 Sobic004G274400 Sobic004G274400 Sobic002G076866--Sobic004G274400 Sobic009G219000 Sobic009G219000 Sobic002G076866--Sobic009G219000 Sobic003G407200 Sobic003G407200 Sobic002G076866--Sobic003G407200 Sobic002G306000 Sobic002G306000 Sobic002G076866--Sobic002G306000 Sobic010G105600 Sobic010G105600 Sobic002G076866--Sobic010G105600 Sobic002G040700 Sobic002G040700 Sobic002G076866--Sobic002G040700 Sobic008G016900 Sobic008G016900 Sobic002G076866--Sobic008G016900 Sobic001G031600 Sobic001G031600 Sobic001G105500--Sobic001G031600 Sobic001G105500--Sobic009G219000 Sobic009G193400 Sobic009G193400 Sobic001G105500--Sobic009G193400 Sobic001G105500--Sobic002G040700 Sobic001G391600 Sobic001G391600 Sobic001G105500--Sobic001G391600 Sobic001G541100 Sobic001G541100 Sobic001G105500--Sobic001G541100 Sobic006G225600 Sobic006G225600 Sobic001G105500--Sobic006G225600 Sobic009G050700 Sobic009G050700 Sobic001G105500--Sobic009G050700 Sobic001G323000 Sobic001G323000 Sobic001G105500--Sobic001G323000 Sobic001G516100 Sobic001G516100 Sobic004G031600--Sobic001G516100 Sobic010G052800 Sobic010G052800 Sobic004G031600--Sobic010G052800 Sobic002G330300 Sobic002G330300 Sobic004G031600--Sobic002G330300 Sobic009G231200 Sobic009G231200 Sobic004G031600--Sobic009G231200 Sobic004G031600--Sobic003G407200 Sobic004G031600--Sobic001G031600 Sobic003G119800 Sobic003G119800 Sobic004G031600--Sobic003G119800 Sobic007G169200 Sobic007G169200 Sobic004G031600--Sobic007G169200 Sobic001G463000 Sobic001G463000 Sobic004G031600--Sobic001G463000 Sobic006G148200 Sobic006G148200 Sobic004G274400--Sobic006G148200 Sobic004G274400--Sobic001G323000 Sobic004G274400--Sobic006G225600 Sobic003G002400 Sobic003G002400 Sobic004G274400--Sobic003G002400 Sobic004G274400--Sobic009G219000 Sobic002G131900 Sobic002G131900 Sobic004G274400--Sobic002G131900 Sobic003G312200 Sobic003G312200 Sobic004G274400--Sobic003G312200 Sobic001G206900 Sobic001G206900 Sobic004G274400--Sobic001G206900 Sobic003G007500 Sobic003G007500 Sobic004G274400--Sobic003G007500 Sobic009G219000--Sobic001G541100 Sobic009G219000--Sobic001G323000 Sobic001G261456 Sobic001G261456 Sobic009G219000--Sobic001G261456 Sobic008G046500 Sobic008G046500 Sobic009G219000--Sobic008G046500 Sobic001G466700 Sobic001G466700 Sobic009G219000--Sobic001G466700 Sobic009G219000--Sobic004G274400 Sobic009G138100 Sobic009G138100 Sobic009G219000--Sobic009G138100 Sobic009G219000--Sobic001G105500 Sobic001G371200 Sobic001G371200 Sobic009G219000--Sobic001G371200 Sobic003G407200--Sobic004G031600 Sobic001G162100 Sobic001G162100 Sobic003G407200--Sobic001G162100 Sobic003G407200--Sobic002G306000 Sobic003G407200--Sobic008G016900 Sobic003G407200--Sobic001G516100 Sobic003G272400 Sobic003G272400 Sobic003G407200--Sobic003G272400 Sobic010G068500 Sobic010G068500 Sobic003G407200--Sobic010G068500 Sobic007G178200 Sobic007G178200 Sobic003G407200--Sobic007G178200 Sobic009G134600 Sobic009G134600 Sobic003G407200--Sobic009G134600 Sobic004G353600 Sobic004G353600 Sobic002G306000--Sobic004G353600 Sobic002G306000--Sobic003G272400 Sobic003G281900 Sobic003G281900 Sobic002G306000--Sobic003G281900 Sobic002G306000--Sobic003G407200 Sobic007G196900 Sobic007G196900 Sobic002G306000--Sobic007G196900 Sobic010G140500 Sobic010G140500 Sobic002G306000--Sobic010G140500 Sobic001G015800 Sobic001G015800 Sobic002G306000--Sobic001G015800 Sobic001G096000 Sobic001G096000 Sobic002G306000--Sobic001G096000 Sobic002G306000--Sobic009G219000 Sobic001G237500 Sobic001G237500 Sobic010G105600--Sobic001G237500 Sobic001G105100 Sobic001G105100 Sobic010G105600--Sobic001G105100 Sobic003G405700 Sobic003G405700 Sobic010G105600--Sobic003G405700 Sobic001G067900 Sobic001G067900 Sobic010G105600--Sobic001G067900 Sobic003G400100 Sobic003G400100 Sobic010G105600--Sobic003G400100 Sobic006G257001 Sobic006G257001 Sobic010G105600--Sobic006G257001 Sobic002G272600 Sobic002G272600 Sobic010G105600--Sobic002G272600 Sobic001G061700 Sobic001G061700 Sobic010G105600--Sobic001G061700 Sobic006G034800 Sobic006G034800 Sobic010G105600--Sobic006G034800 Sobic001G512400 Sobic001G512400 Sobic002G040700--Sobic001G512400 Sobic001G439600 Sobic001G439600 Sobic002G040700--Sobic001G439600 Sobic008G165000 Sobic008G165000 Sobic002G040700--Sobic008G165000 Sobic002G040700--Sobic001G105500 Sobic007G118000 Sobic007G118000 Sobic002G040700--Sobic007G118000 Sobic004G010900 Sobic004G010900 Sobic002G040700--Sobic004G010900 Sobic003G116600 Sobic003G116600 Sobic002G040700--Sobic003G116600 Sobic001G048700 Sobic001G048700 Sobic002G040700--Sobic001G048700 Sobic001G367000 Sobic001G367000 Sobic002G040700--Sobic001G367000 Sobic008G016900--Sobic002G330300 Sobic002G379400 Sobic002G379400 Sobic008G016900--Sobic002G379400 Sobic010G062800 Sobic010G062800 Sobic008G016900--Sobic010G062800 Sobic001G283500 Sobic001G283500 Sobic008G016900--Sobic001G283500 Sobic007G188100 Sobic007G188100 Sobic008G016900--Sobic007G188100 Sobic004G145200 Sobic004G145200 Sobic008G016900--Sobic004G145200 Sobic008G016900--Sobic001G162100 Sobic009G059700 Sobic009G059700 Sobic008G016900--Sobic009G059700 Sobic002G343500 Sobic002G343500 Sobic008G016900--Sobic002G343500
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.