Gene annotation
Transcriptome id Sobic.001G502700.1
Synonym Sb01g046960
Functional annotation SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence. (PubMedID : 27586543)
nodulin, putative, expressed
UniProt C5WXW6
Pfam PF00892
Panther DB PTHR31218 PTHR31218:SF46
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane GO:0016020membrane


Orthologs (automatic annotation)
TAIR AT5G07050 : nodulin MtN21 /EamA-like transporter family protein
RAP-DB (Rice) LOC_Os03g05530.1 : nodulin, putative, expressed
MaizeGDB (Corn) Zm00025a000665
Brachypodium PNT78189
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.001G502700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G088815 - -
2 Sobic.004G155200 expressed protein -
3 Sobic.006G132400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@CHIT3 - Chitinase family protein precursor, expressed K01183: chitinase
4 Sobic.002G225300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@CPuORF39 - conserved peptide uORF-containing transcript, expressed K09419: heat shock transcription factor, other eukaryote
5 Sobic.003G197300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@AR791, putative, expressed -
6 Sobic.001G037150 - -
7 Sobic.005G175200 TKL_IRAK_DUF26-lc.25 - DUF26 kinases have homology to DUF26 containing loci, expressed -
8 Sobic.005G061033 - -
9 Sobic.001G510400 cytochrome P450 86A1, putative, expressed -
10 Sobic.001G324700 cysteine proteinase inhibitor 8 precursor, putative, expressed -
11 Sobic.001G166401 - -
12 Sobic.008G092400 - -
13 Sobic.007G152500 cytochrome P450, putative, expressed -
14 Sobic.001G379000 aminotransferase, putative, expressed K00827: alanine-glyoxylate transaminase / (R)-3-amino-2-methylpropionate-pyruvate transaminase
15 Sobic.001G196700 OsProCP3 - Putative Lysosomal Pro-x Carboxypeptidase homologue, expressed -
16 Sobic.008G105432 - -
17 Sobic.004G214000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@phosphoribosyl transferase, putative, expressed K00759: APRT, adenine phosphoribosyltransferase
18 Sobic.005G110445 - -
19 Sobic.003G242200 Up-reguralion under drought(PubMedID : 24916767)@protein phosphatase 2C, putative, expressed K14497: protein phosphatase 2C
20 Sobic.003G331700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@thaumatin, putative, expressed -


Gene co-expression network
sample Sobic001G502700 Sobic001G502700 Sobic008G088815 Sobic008G088815 Sobic001G502700--Sobic008G088815 Sobic004G155200 Sobic004G155200 Sobic001G502700--Sobic004G155200 Sobic006G132400 Sobic006G132400 Sobic001G502700--Sobic006G132400 Sobic002G225300 Sobic002G225300 Sobic001G502700--Sobic002G225300 Sobic003G197300 Sobic003G197300 Sobic001G502700--Sobic003G197300 Sobic001G037150 Sobic001G037150 Sobic001G502700--Sobic001G037150 Sobic005G175200 Sobic005G175200 Sobic001G502700--Sobic005G175200 Sobic005G061033 Sobic005G061033 Sobic001G502700--Sobic005G061033 Sobic001G510400 Sobic001G510400 Sobic001G502700--Sobic001G510400 Sobic008G088815--Sobic001G502700 Sobic004G270350 Sobic004G270350 Sobic008G088815--Sobic004G270350 Sobic008G088815--Sobic006G132400 Sobic003G331700 Sobic003G331700 Sobic008G088815--Sobic003G331700 Sobic008G088815--Sobic005G175200 Sobic005G110445 Sobic005G110445 Sobic008G088815--Sobic005G110445 Sobic005G169300 Sobic005G169300 Sobic008G088815--Sobic005G169300 Sobic006G132300 Sobic006G132300 Sobic008G088815--Sobic006G132300 Sobic005G087666 Sobic005G087666 Sobic008G088815--Sobic005G087666 Sobic004G155200--Sobic001G502700 Sobic001G286000 Sobic001G286000 Sobic004G155200--Sobic001G286000 Sobic004G155200--Sobic002G225300 Sobic002G185300 Sobic002G185300 Sobic004G155200--Sobic002G185300 Sobic008G092400 Sobic008G092400 Sobic004G155200--Sobic008G092400 Sobic004G155200--Sobic001G037150 Sobic004G155150 Sobic004G155150 Sobic004G155200--Sobic004G155150 Sobic001G005700 Sobic001G005700 Sobic004G155200--Sobic001G005700 Sobic006G267900 Sobic006G267900 Sobic004G155200--Sobic006G267900 Sobic001G196700 Sobic001G196700 Sobic006G132400--Sobic001G196700 Sobic003G376000 Sobic003G376000 Sobic006G132400--Sobic003G376000 Sobic008G154400 Sobic008G154400 Sobic006G132400--Sobic008G154400 Sobic005G112066 Sobic005G112066 Sobic006G132400--Sobic005G112066 Sobic007G156300 Sobic007G156300 Sobic006G132400--Sobic007G156300 Sobic002G077500 Sobic002G077500 Sobic006G132400--Sobic002G077500 Sobic007G049400 Sobic007G049400 Sobic006G132400--Sobic007G049400 Sobic001G326000 Sobic001G326000 Sobic006G132400--Sobic001G326000 Sobic010G095300 Sobic010G095300 Sobic006G132400--Sobic010G095300 Sobic004G236550 Sobic004G236550 Sobic002G225300--Sobic004G236550 Sobic002G225300--Sobic004G155200 Sobic002G225300--Sobic001G005700 Sobic003G289900 Sobic003G289900 Sobic002G225300--Sobic003G289900 Sobic007G025800 Sobic007G025800 Sobic002G225300--Sobic007G025800 Sobic007G131700 Sobic007G131700 Sobic002G225300--Sobic007G131700 Sobic002G225300--Sobic001G037150 Sobic003G225900 Sobic003G225900 Sobic002G225300--Sobic003G225900 Sobic003G332000 Sobic003G332000 Sobic002G225300--Sobic003G332000 Sobic005G110421 Sobic005G110421 Sobic003G197300--Sobic005G110421 Sobic001G206300 Sobic001G206300 Sobic003G197300--Sobic001G206300 Sobic003G197300--Sobic002G225300 Sobic003G197300--Sobic001G510400 Sobic003G197300--Sobic005G061033 Sobic003G197300--Sobic002G185300 Sobic003G197300--Sobic003G289900 Sobic005G061000 Sobic005G061000 Sobic003G197300--Sobic005G061000 Sobic003G281600 Sobic003G281600 Sobic003G197300--Sobic003G281600 Sobic001G095500 Sobic001G095500 Sobic001G037150--Sobic001G095500 Sobic010G260300 Sobic010G260300 Sobic001G037150--Sobic010G260300 Sobic001G037150--Sobic007G131700 Sobic003G252400 Sobic003G252400 Sobic001G037150--Sobic003G252400 Sobic001G037150--Sobic002G225300 Sobic002G229600 Sobic002G229600 Sobic001G037150--Sobic002G229600 Sobic001G037150--Sobic004G155200 Sobic001G037150--Sobic001G005700 Sobic001G112000 Sobic001G112000 Sobic001G037150--Sobic001G112000 Sobic005G175200--Sobic005G169300 Sobic005G175200--Sobic005G110445 Sobic005G175200--Sobic006G132300 Sobic008G186700 Sobic008G186700 Sobic005G175200--Sobic008G186700 Sobic010G237100 Sobic010G237100 Sobic005G175200--Sobic010G237100 Sobic001G381250 Sobic001G381250 Sobic005G175200--Sobic001G381250 Sobic005G061033--Sobic005G061000 Sobic001G237000 Sobic001G237000 Sobic005G061033--Sobic001G237000 Sobic005G061033--Sobic003G197300 Sobic006G119600 Sobic006G119600 Sobic005G061033--Sobic006G119600 Sobic004G256800 Sobic004G256800 Sobic005G061033--Sobic004G256800 Sobic005G061033--Sobic001G206300 Sobic005G061033--Sobic001G502700 Sobic005G061033--Sobic002G225300 Sobic003G224200 Sobic003G224200 Sobic005G061033--Sobic003G224200 Sobic001G510400--Sobic005G110421 Sobic001G510400--Sobic003G197300 Sobic001G510400--Sobic002G185300 Sobic002G342100 Sobic002G342100 Sobic001G510400--Sobic002G342100 Sobic001G510400--Sobic001G112000 Sobic003G304100 Sobic003G304100 Sobic001G510400--Sobic003G304100 Sobic003G409800 Sobic003G409800 Sobic001G510400--Sobic003G409800 Sobic003G358200 Sobic003G358200 Sobic001G510400--Sobic003G358200 Sobic001G510400--Sobic002G225300
Octagon: transcription factors


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