Gene annotation
| Transcriptome id | Sobic.003G137900.2 |
|---|---|
| Synonym | Sb03g011740 |
| Functional annotation | "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence." (PubMedID : 27586543) expressed protein |
| UniProt | C5XHZ9 |
| Pfam | - |
| Panther DB | PTHR10209 PTHR10209:SF205 |
| NCBI CDD | - |
| KEGG Orthology | - |
| Gene Ontology | - |
Orthologs (automatic annotation)
| TAIR | AT5G48020 : 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein |
|---|---|
| RAP-DB (Rice) | LOC_Os02g48630.1 : expressed protein |
| MaizeGDB (Corn) | Zm00025a032567 |
| Brachypodium | KQK01036 |
| Barley | HORVU6Hr1G070600.1 , HORVU6Hr1G070600.3 , HORVU6Hr1G070600.2 , HORVU6Hr1G070600.5 , HORVU6Hr1G070600.4 |
| Wheat | TraesCS6A02G281000 , TraesCS6B02G309800 , TraesCS6D02G261300 |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.003G397400 | "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@expressed protein | - |
| 2 | Sobic.007G073750 | - | - |
| 3 | Sobic.005G016900 | CRP11 - Cysteine-rich family protein precursor, expressed | - |
| 4 | Sobic.009G097300 | SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.23 - CAMK includes calcium/calmodulin depedent protein kinases, expressed | - |
| 5 | Sobic.008G052500 | receptor-like kinase, putative, expressed | - |
| 6 | Sobic.002G325600 | ankyrin repeat family protein, putative, expressed | - |
| 7 | Sobic.007G143100 | SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@- | - |
| 8 | Sobic.007G143200 | Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@- | - |
| 9 | Sobic.009G076700 | expressed protein | - |
| 10 | Sobic.003G083000 | glycosyl hydrolase family 10 protein, putative, expressed | - |
| 11 | Sobic.007G169600 | L1P family of ribosomal proteins domain containing protein, expressed | K02865: RP-L10Ae, large subunit ribosomal protein L10Ae |
| 12 | Sobic.010G238400 | cis-zeatin O-glucosyltransferase, putative, expressed | K13495: cis-zeatin O-glucosyltransferase |
| 13 | Sobic.010G253500 | cycloartenol synthase, putative, expressed | K19011: achilleol B synthase |
| 14 | Sobic.006G203000 | "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@immutans protein, putative, expressed | K17893: AOX1, ubiquinol oxidase |
| 15 | Sobic.002G331450 | - | - |
| 16 | Sobic.010G245900 | - | - |
| 17 | Sobic.010G054500 | 1-aminocyclopropane-1-carboxylate oxidase homolog 4, putative, expressed | - |
| 18 | Sobic.001G075101 | - | - |
| 19 | Sobic.002G037400 | "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@9-cis-epoxycarotenoid dioxygenase 1, chloroplast precursor, putative, expressed | K09840: 9-cis-epoxycarotenoid dioxygenase |
| 20 | Sobic.005G215766 | - | - |
Gene co-expression network
Octagon: transcription factors
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