Gene annotation
Transcriptome id Sobic.001G397400.1
Synonym Sb01g037600, ACN1, AAE7
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence." (PubMedID : 27586543)
AMP-binding enzyme, putative, expressed
UniProt C5WMI3
Pfam PF13193 PF00501
Panther DB PTHR24095 PTHR24095:SF174
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0008152; metabolic process GO:0003824catalytic activity


Orthologs (automatic annotation)
TAIR AT3G16910 : acyl-activating enzyme 7
RAP-DB (Rice) LOC_Os03g19250.1 : AMP-binding enzyme, putative, expressed
MaizeGDB (Corn) Zm00025a002116 , Zm00025a052585
Brachypodium KQK22027 , KQK22026 , KQK22025 , PNT77543
Barley HORVU4Hr1G054210.6 , HORVU4Hr1G054210.4 , HORVU4Hr1G054210.2 , HORVU4Hr1G054210.3 , HORVU4Hr1G054210.1 , HORVU6Hr1G011140.13 , HORVU6Hr1G011140.1 , HORVU6Hr1G011140.4 , HORVU6Hr1G011140.9
Wheat TraesCS4D02G186800 , TraesCS4B02G185400 , TraesCS4A02G119100 , TraesCS4D02G186700 , TraesCS4A02G119200
Populus -


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cDNA sequences
Sobic.001G397400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G408200 Candidate orthologue to the genomic region of wheat Hessian fy resistance gene H32(PubMedID : 28624908)@CAMK_KIN1/SNF1/Nim1_like_AMPKh.4 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K07198: PRKAA, 5'-AMP-activated protein kinase, catalytic alpha subunit
2 Sobic.002G172900 OBP32pep, putative, expressed -
3 Sobic.001G156100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@aminotransferase, putative, expressed K00819: rocD, ornithine--oxo-acid transaminase
4 Sobic.001G023200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@electron transfer flavoprotein subunit alpha, mitochondrial precursor, putative, expressed K03522: fixB, electron transfer flavoprotein alpha subunit
5 Sobic.001G427100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@mitochondrial carrier protein, putative, expressed K13354: SLC25A17, solute carrier family 25 (peroxisomal adenine nucleotide transporter), member 17
6 Sobic.003G009100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@peroxisomal membrane protein, putative, expressed K13348: protein Mpv17
7 Sobic.004G162400 ERD1 protein, chloroplast precursor, putative, expressed K03696: ATP-dependent Clp protease ATP-binding subunit ClpC
8 Sobic.003G005600 ubiquitin conjugating enzyme protein, putative, expressed K10581: ubiquitin-conjugating enzyme E2 O
9 Sobic.001G474700 expressed protein -
10 Sobic.006G140000 receptor-like protein kinase precursor, putative, expressed -
11 Sobic.002G304000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@nitrilase, putative, expressed K01431: UPB1, beta-ureidopropionase
12 Sobic.008G191100 nodulin, putative, expressed -
13 Sobic.009G126900 mitochondrial carrier protein, putative, expressed -
14 Sobic.004G347300 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@thioredoxin, putative, expressed -
15 Sobic.006G192700 expressed protein -
16 Sobic.009G153000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@actin, putative, expressed K10355: actin, other eukaryote
17 Sobic.010G129600 dual specificity protein phosphatase, putative, expressed K04459: DUSP, dual specificity MAP kinase phosphatase
18 Sobic.008G021800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@NAC domain transcription factor, putative, expressed -
19 Sobic.001G488500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@"OsFBK12(Ortholog in rice:Chen et al., 2013)"(PubMedID : 31659851)@OsFBK12 - F-box domain and kelch repeat containing protein, expressed -
20 Sobic.003G303300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aminotransferase, classes I and II, domain containing protein, expressed K14454: aspartate aminotransferase, cytoplasmic


Gene co-expression network
sample Sobic001G397400 Sobic001G397400 Sobic001G408200 Sobic001G408200 Sobic001G397400--Sobic001G408200 Sobic002G172900 Sobic002G172900 Sobic001G397400--Sobic002G172900 Sobic001G156100 Sobic001G156100 Sobic001G397400--Sobic001G156100 Sobic001G023200 Sobic001G023200 Sobic001G397400--Sobic001G023200 Sobic001G427100 Sobic001G427100 Sobic001G397400--Sobic001G427100 Sobic003G009100 Sobic003G009100 Sobic001G397400--Sobic003G009100 Sobic004G162400 Sobic004G162400 Sobic001G397400--Sobic004G162400 Sobic003G005600 Sobic003G005600 Sobic001G397400--Sobic003G005600 Sobic001G474700 Sobic001G474700 Sobic001G397400--Sobic001G474700 Sobic003G303300 Sobic003G303300 Sobic001G408200--Sobic003G303300 Sobic005G079900 Sobic005G079900 Sobic001G408200--Sobic005G079900 Sobic001G408200--Sobic001G474700 Sobic001G408200--Sobic001G397400 Sobic001G408200--Sobic001G156100 Sobic001G408200--Sobic003G005600 Sobic004G101900 Sobic004G101900 Sobic001G408200--Sobic004G101900 Sobic001G224600 Sobic001G224600 Sobic001G408200--Sobic001G224600 Sobic002G304000 Sobic002G304000 Sobic001G408200--Sobic002G304000 Sobic009G126900 Sobic009G126900 Sobic002G172900--Sobic009G126900 Sobic001G180900 Sobic001G180900 Sobic002G172900--Sobic001G180900 Sobic008G110600 Sobic008G110600 Sobic002G172900--Sobic008G110600 Sobic002G172900--Sobic001G397400 Sobic008G190900 Sobic008G190900 Sobic002G172900--Sobic008G190900 Sobic002G378800 Sobic002G378800 Sobic002G172900--Sobic002G378800 Sobic002G172900--Sobic001G474700 Sobic006G034000 Sobic006G034000 Sobic002G172900--Sobic006G034000 Sobic002G172900--Sobic003G005600 Sobic009G121100 Sobic009G121100 Sobic001G156100--Sobic009G121100 Sobic001G447500 Sobic001G447500 Sobic001G156100--Sobic001G447500 Sobic006G214500 Sobic006G214500 Sobic001G156100--Sobic006G214500 Sobic002G152200 Sobic002G152200 Sobic001G156100--Sobic002G152200 Sobic009G229800 Sobic009G229800 Sobic001G156100--Sobic009G229800 Sobic008G160700 Sobic008G160700 Sobic001G156100--Sobic008G160700 Sobic009G027000 Sobic009G027000 Sobic001G156100--Sobic009G027000 Sobic001G373200 Sobic001G373200 Sobic001G156100--Sobic001G373200 Sobic004G295800 Sobic004G295800 Sobic001G156100--Sobic004G295800 Sobic001G023200--Sobic003G009100 Sobic002G258100 Sobic002G258100 Sobic001G023200--Sobic002G258100 Sobic001G010400 Sobic001G010400 Sobic001G023200--Sobic001G010400 Sobic004G347300 Sobic004G347300 Sobic001G023200--Sobic004G347300 Sobic001G393800 Sobic001G393800 Sobic001G023200--Sobic001G393800 Sobic004G203100 Sobic004G203100 Sobic001G023200--Sobic004G203100 Sobic010G016400 Sobic010G016400 Sobic001G023200--Sobic010G016400 Sobic002G113300 Sobic002G113300 Sobic001G023200--Sobic002G113300 Sobic007G106900 Sobic007G106900 Sobic001G023200--Sobic007G106900 Sobic003G305200 Sobic003G305200 Sobic001G427100--Sobic003G305200 Sobic001G427100--Sobic009G121100 Sobic001G427100--Sobic001G474700 Sobic001G427100--Sobic004G295800 Sobic001G427100--Sobic001G156100 Sobic001G427100--Sobic009G126900 Sobic001G427100--Sobic003G005600 Sobic003G329400 Sobic003G329400 Sobic001G427100--Sobic003G329400 Sobic001G427100--Sobic001G373200 Sobic003G009100--Sobic001G023200 Sobic003G354400 Sobic003G354400 Sobic003G009100--Sobic003G354400 Sobic005G150800 Sobic005G150800 Sobic003G009100--Sobic005G150800 Sobic003G009100--Sobic002G113300 Sobic002G132000 Sobic002G132000 Sobic003G009100--Sobic002G132000 Sobic004G006200 Sobic004G006200 Sobic003G009100--Sobic004G006200 Sobic009G054700 Sobic009G054700 Sobic003G009100--Sobic009G054700 Sobic003G009100--Sobic004G203100 Sobic006G192700 Sobic006G192700 Sobic003G009100--Sobic006G192700 Sobic005G216000 Sobic005G216000 Sobic004G162400--Sobic005G216000 Sobic004G162400--Sobic002G304000 Sobic005G231900 Sobic005G231900 Sobic004G162400--Sobic005G231900 Sobic004G162400--Sobic004G101900 Sobic009G161000 Sobic009G161000 Sobic004G162400--Sobic009G161000 Sobic005G178100 Sobic005G178100 Sobic004G162400--Sobic005G178100 Sobic003G355600 Sobic003G355600 Sobic004G162400--Sobic003G355600 Sobic004G162400--Sobic009G126900 Sobic001G015500 Sobic001G015500 Sobic004G162400--Sobic001G015500 Sobic003G005600--Sobic009G126900 Sobic003G005600--Sobic002G304000 Sobic001G003000 Sobic001G003000 Sobic003G005600--Sobic001G003000 Sobic003G005600--Sobic003G329400 Sobic006G271200 Sobic006G271200 Sobic003G005600--Sobic006G271200 Sobic003G005600--Sobic004G101900 Sobic008G062200 Sobic008G062200 Sobic003G005600--Sobic008G062200 Sobic010G043400 Sobic010G043400 Sobic003G005600--Sobic010G043400 Sobic010G064700 Sobic010G064700 Sobic003G005600--Sobic010G064700 Sobic001G474700--Sobic009G126900 Sobic001G474700--Sobic001G427100 Sobic001G474700--Sobic001G373200 Sobic003G195500 Sobic003G195500 Sobic001G474700--Sobic003G195500 Sobic001G474700--Sobic003G005600 Sobic001G474700--Sobic004G295800 Sobic003G036800 Sobic003G036800 Sobic001G474700--Sobic003G036800 Sobic007G024700 Sobic007G024700 Sobic001G474700--Sobic007G024700 Sobic001G474700--Sobic002G132000
Octagon: transcription factors


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