Gene annotation
Transcriptome id Sobic.008G021800.1
Synonym anac025, Sb08g001940, NAC025
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence." (PubMedID : 27586543)
NAC domain transcription factor, putative, expressed
UniProt C5YR27
Pfam PF02365
Panther DB PTHR31719 PTHR31719:SF40
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003677DNA binding


Orthologs (automatic annotation)
TAIR AT1G61110 : NAC domain containing protein 25
RAP-DB (Rice) LOC_Os12g03040.1 : no apical meristem protein, putative, expressed
MaizeGDB (Corn) Zm00025a053477 , Zm00025a002287 , Zm00025a049186 , Zm00025a035397 , Zm00025a056131 , Zm00025a032141 , Zm00025a053749 , Zm00025a052457 , Zm00025a041401 , Zm00025a020964 , Zm00025a050329 , Zm00025a019940 , Zm00025a000360 , Zm00025a050155 , Zm00025a040250 , Zm00025a011264
Brachypodium KQJ94869 , KQJ94263 , KQJ94262 , KQK02753 , KQK19730 , KQK10307 , PNT78278 , PNT76724 , KQK20059 , KQJ82828 , KQK23882 , PNT76596
Barley HORVU3Hr1G080100.4 , HORVU3Hr1G080100.5 , HORVU3Hr1G080100.6 , HORVU3Hr1G080100.7 , HORVU3Hr1G080100.3 , HORVU3Hr1G094170.1 , HORVU4Hr1G083050.2 , HORVU4Hr1G083050.3 , HORVU4Hr1G083050.4 , HORVU4Hr1G083050.5 , HORVU4Hr1G083050.6 , HORVU4Hr1G083050.7 , HORVU4Hr1G083050.8 , HORVU4Hr1G083050.9 , HORVU4Hr1G083050.10 , HORVU4Hr1G083050.11 , HORVU4Hr1G083050.15 , HORVU7Hr1G012780.7 , HORVU3Hr1G014140.1 , HORVU3Hr1G014140.3 , HORVU3Hr1G014140.2 , HORVU3Hr1G014140.4 , HORVU4Hr1G051290.7 , HORVU4Hr1G051290.1 , HORVU4Hr1G051290.2 , HORVU4Hr1G051290.8 , HORVU2Hr1G004130.1 , HORVU4Hr1G083050.12 , HORVU7Hr1G012780.9 , HORVU7Hr1G012780.8 , HORVU7Hr1G012780.5 , HORVU7Hr1G012780.4 , HORVU7Hr1G012780.6 , HORVU7Hr1G012780.1 , HORVU7Hr1G012780.3 , HORVU7Hr1G012780.2 , HORVU5Hr1G045650.8 , HORVU5Hr1G045650.5 , HORVU5Hr1G045650.4 , HORVU5Hr1G045650.7 , HORVU5Hr1G045650.6 , HORVU5Hr1G045650.1 , HORVU5Hr1G045650.3 , HORVU5Hr1G045650.2 , HORVU4Hr1G083050.13 , HORVU4Hr1G083050.14 , HORVU4Hr1G089660.1 , HORVU2Hr1G039640.2 , HORVU2Hr1G039640.3 , HORVU2Hr1G039640.4
Wheat TraesCS2B02G328300 , TraesCS3B02G194000 , TraesCS3B02G371200 , TraesCS7D02G062100 , TraesCS3D02G333100 , TraesCS7D02G063300 , TraesCS2A02G311500 , TraesCS2B02G228900 , TraesCS5A02G143200 , TraesCS4A02G421200 , TraesCS6A02G108300 , TraesCS6A02G108300 , TraesCS7A02G317100 , TraesCS7A02G317100 , TraesCS4B02G173600 , TraesCS4D02G175700 , TraesCS3B02G093300 , TraesCS4A02G419900 , TraesCS3A02G339600 , TraesCS3A02G339600 , TraesCS5D02G148800 , TraesCS2A02G201800 , TraesCS2A02G201800 , TraesCS3D02G078900 , TraesCS7D02G062600 , TraesCS4B02G320300 , TraesCS7D02G314000 , TraesCS7D02G314000 , TraesCS4A02G131000 , TraesCS4A02G421100 , TraesCS4A02G420900 , TraesCS7A02G068300 , TraesCS4D02G316800 , TraesCS2B02G228900 , TraesCS2D02G309800 , TraesCS7B02G233300 , TraesCS3A02G162900 , TraesCS2D02G214100 , TraesCS7D02G329200 , TraesCS7A02G349500 , TraesCS3D02G170000 , TraesCS7D02G062300 , TraesCS5B02G142100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G241000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@CTP synthase, putative, expressed K01937: pyrG, CTP synthase
2 Sobic.001G156100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@aminotransferase, putative, expressed K00819: rocD, ornithine--oxo-acid transaminase
3 Sobic.002G113300 expressed protein -
4 Sobic.001G447500 aminotransferase domain containing protein, putative, expressed K00826: E2.6.1.42, branched-chain amino acid aminotransferase
5 Sobic.002G304000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@nitrilase, putative, expressed K01431: UPB1, beta-ureidopropionase
6 Sobic.006G138400 regulatory subunit, putative, expressed -
7 Sobic.009G121100 expressed protein -
8 Sobic.003G329400 dihydropyrimidinase, putative, expressed K01464: DPYS, dht, dihydropyrimidinase
9 Sobic.006G127100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./early senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@malate synthase, glyoxysomal, putative, expressed K01638: aceB, malate synthase
10 Sobic.003G241050 - -
11 Sobic.001G397400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@AMP-binding enzyme, putative, expressed -
12 Sobic.003G407300 histidine kinase, putative, expressed K14489: arabidopsis histidine kinase 2/3/4 (cytokinin receptor)
13 Sobic.004G162400 ERD1 protein, chloroplast precursor, putative, expressed K03696: ATP-dependent Clp protease ATP-binding subunit ClpC
14 Sobic.003G093300 - -
15 Sobic.009G126900 mitochondrial carrier protein, putative, expressed -
16 Sobic.010G248800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@reticulon domain containing protein, putative, expressed -
17 Sobic.004G330900 Positive cytokinine regulator(PubMedID : 30367619)@two-component response regulator, putative, expressed K14491: two-component response regulator ARR-B family
18 Sobic.008G062200 dehydrogenase E1 component domain containing protein, expressed K00166: BCKDHA, 2-oxoisovalerate dehydrogenase E1 component alpha subunit
19 Sobic.003G148800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@2-oxo acid dehydrogenases acyltransferase domain containing protein, expressed K09699: DBT, 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase)
20 Sobic.010G064700 two-component response regulator, putative, expressed K14491: two-component response regulator ARR-B family


Gene co-expression network
sample Sobic008G021800 Sobic008G021800 Sobic003G241000 Sobic003G241000 Sobic008G021800--Sobic003G241000 Sobic001G156100 Sobic001G156100 Sobic008G021800--Sobic001G156100 Sobic002G113300 Sobic002G113300 Sobic008G021800--Sobic002G113300 Sobic001G447500 Sobic001G447500 Sobic008G021800--Sobic001G447500 Sobic002G304000 Sobic002G304000 Sobic008G021800--Sobic002G304000 Sobic006G138400 Sobic006G138400 Sobic008G021800--Sobic006G138400 Sobic009G121100 Sobic009G121100 Sobic008G021800--Sobic009G121100 Sobic003G329400 Sobic003G329400 Sobic008G021800--Sobic003G329400 Sobic006G127100 Sobic006G127100 Sobic008G021800--Sobic006G127100 Sobic003G241000--Sobic008G021800 Sobic003G241000--Sobic002G113300 Sobic003G241000--Sobic001G447500 Sobic003G241000--Sobic006G127100 Sobic004G297400 Sobic004G297400 Sobic003G241000--Sobic004G297400 Sobic003G241000--Sobic001G156100 Sobic003G061400 Sobic003G061400 Sobic003G241000--Sobic003G061400 Sobic001G408200 Sobic001G408200 Sobic003G241000--Sobic001G408200 Sobic003G061800 Sobic003G061800 Sobic003G241000--Sobic003G061800 Sobic001G156100--Sobic009G121100 Sobic001G156100--Sobic001G447500 Sobic006G214500 Sobic006G214500 Sobic001G156100--Sobic006G214500 Sobic002G152200 Sobic002G152200 Sobic001G156100--Sobic002G152200 Sobic009G229800 Sobic009G229800 Sobic001G156100--Sobic009G229800 Sobic008G160700 Sobic008G160700 Sobic001G156100--Sobic008G160700 Sobic009G027000 Sobic009G027000 Sobic001G156100--Sobic009G027000 Sobic001G373200 Sobic001G373200 Sobic001G156100--Sobic001G373200 Sobic004G295800 Sobic004G295800 Sobic001G156100--Sobic004G295800 Sobic002G113300--Sobic006G127100 Sobic007G219900 Sobic007G219900 Sobic002G113300--Sobic007G219900 Sobic002G113300--Sobic001G156100 Sobic003G009100 Sobic003G009100 Sobic002G113300--Sobic003G009100 Sobic001G373100 Sobic001G373100 Sobic002G113300--Sobic001G373100 Sobic004G345800 Sobic004G345800 Sobic002G113300--Sobic004G345800 Sobic002G113300--Sobic008G021800 Sobic002G113300--Sobic001G447500 Sobic002G113300--Sobic003G241000 Sobic001G447500--Sobic001G156100 Sobic001G447500--Sobic006G214500 Sobic001G447500--Sobic003G329400 Sobic003G148800 Sobic003G148800 Sobic001G447500--Sobic003G148800 Sobic008G062200 Sobic008G062200 Sobic001G447500--Sobic008G062200 Sobic001G447500--Sobic007G219900 Sobic003G407300 Sobic003G407300 Sobic001G447500--Sobic003G407300 Sobic001G447500--Sobic009G121100 Sobic001G443900 Sobic001G443900 Sobic001G447500--Sobic001G443900 Sobic009G226300 Sobic009G226300 Sobic002G304000--Sobic009G226300 Sobic009G054500 Sobic009G054500 Sobic002G304000--Sobic009G054500 Sobic004G101900 Sobic004G101900 Sobic002G304000--Sobic004G101900 Sobic002G304000--Sobic003G148800 Sobic002G215700 Sobic002G215700 Sobic002G304000--Sobic002G215700 Sobic002G304000--Sobic008G062200 Sobic001G325200 Sobic001G325200 Sobic002G304000--Sobic001G325200 Sobic003G355600 Sobic003G355600 Sobic002G304000--Sobic003G355600 Sobic003G105800 Sobic003G105800 Sobic002G304000--Sobic003G105800 Sobic006G138400--Sobic006G214500 Sobic003G408500 Sobic003G408500 Sobic006G138400--Sobic003G408500 Sobic006G138400--Sobic009G121100 Sobic002G046800 Sobic002G046800 Sobic006G138400--Sobic002G046800 Sobic006G138400--Sobic003G407300 Sobic010G001500 Sobic010G001500 Sobic006G138400--Sobic010G001500 Sobic008G009900 Sobic008G009900 Sobic006G138400--Sobic008G009900 Sobic007G024700 Sobic007G024700 Sobic006G138400--Sobic007G024700 Sobic003G005800 Sobic003G005800 Sobic006G138400--Sobic003G005800 Sobic009G121100--Sobic006G214500 Sobic009G121100--Sobic003G407300 Sobic003G019100 Sobic003G019100 Sobic009G121100--Sobic003G019100 Sobic009G121100--Sobic001G156100 Sobic009G121100--Sobic001G443900 Sobic009G121100--Sobic001G373200 Sobic010G078100 Sobic010G078100 Sobic009G121100--Sobic010G078100 Sobic009G121100--Sobic004G295800 Sobic002G303000 Sobic002G303000 Sobic009G121100--Sobic002G303000 Sobic001G322700 Sobic001G322700 Sobic003G329400--Sobic001G322700 Sobic003G329400--Sobic008G062200 Sobic003G329400--Sobic001G325200 Sobic010G107000 Sobic010G107000 Sobic003G329400--Sobic010G107000 Sobic003G329400--Sobic002G304000 Sobic007G068100 Sobic007G068100 Sobic003G329400--Sobic007G068100 Sobic003G329400--Sobic009G226300 Sobic003G329400--Sobic003G148800 Sobic003G354400 Sobic003G354400 Sobic003G329400--Sobic003G354400 Sobic006G127100--Sobic007G219900 Sobic006G127100--Sobic002G113300 Sobic006G127100--Sobic004G345800 Sobic004G333200 Sobic004G333200 Sobic006G127100--Sobic004G333200 Sobic004G321800 Sobic004G321800 Sobic006G127100--Sobic004G321800 Sobic006G127100--Sobic003G148800 Sobic003G366400 Sobic003G366400 Sobic006G127100--Sobic003G366400 Sobic002G324000 Sobic002G324000 Sobic006G127100--Sobic002G324000 Sobic003G184900 Sobic003G184900 Sobic006G127100--Sobic003G184900
Octagon: transcription factors


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