Gene annotation
Transcriptome id Sobic.010G064700.1,Sobic.010G064700.2
Synonym ARR12, Sb10g005580, RR12
Functional annotation two-component response regulator, putative, expressed
UniProt A0A194YHP2
Pfam PF00249 PF00072
Panther DB PTHR26402 PTHR26402:SF558
NCBI CDD -
KEGG Orthology K14491; two-component response regulator ARR-B family
Gene Ontology GO:0000160; phosphorelay signal transduction system


Orthologs (automatic annotation)
TAIR AT2G25180 : response regulator 12
RAP-DB (Rice) LOC_Os06g08440.1 : two-component response regulator, putative, expressed
MaizeGDB (Corn) Zm00025a049788
Brachypodium KQK19286 , PNT76356
Barley HORVU6Hr1G085560.4 , HORVU6Hr1G085560.5 , HORVU6Hr1G085560.6 , HORVU6Hr1G085560.7 , HORVU6Hr1G085560.3 , HORVU6Hr1G085560.8 , HORVU6Hr1G068570.6 , HORVU6Hr1G068570.7 , HORVU6Hr1G068570.4 , HORVU6Hr1G068570.5 , HORVU6Hr1G068570.2 , HORVU6Hr1G068570.3 , HORVU6Hr1G068570.1 , HORVU6Hr1G068570.8 , HORVU6Hr1G068570.9 , HORVU6Hr1G068570.21 , HORVU6Hr1G068570.20 , HORVU6Hr1G068570.23 , HORVU6Hr1G085590.11 , HORVU6Hr1G085590.12 , HORVU6Hr1G085590.10 , HORVU6Hr1G085590.13 , HORVU6Hr1G085590.15 , HORVU6Hr1G085590.14 , HORVU6Hr1G085590.17 , HORVU6Hr1G085590.16 , HORVU6Hr1G085560.10 , HORVU6Hr1G085560.11 , HORVU7Hr1G030020.1 , HORVU6Hr1G085590.9 , HORVU6Hr1G085590.8 , HORVU6Hr1G085590.5 , HORVU6Hr1G085590.4 , HORVU6Hr1G085590.7 , HORVU6Hr1G085590.1 , HORVU6Hr1G085590.3 , HORVU6Hr1G085590.2 , HORVU6Hr1G068570.14 , HORVU6Hr1G068570.15 , HORVU6Hr1G068570.16 , HORVU6Hr1G068570.17 , HORVU6Hr1G068570.10 , HORVU6Hr1G068570.11 , HORVU6Hr1G068570.12 , HORVU6Hr1G068570.13
Wheat TraesCS7B02G049200 , TraesCS7D02G148000 , TraesCS7D02G148200 , TraesCS6A02G359200 , TraesCS6B02G392000 , TraesCS6D02G342200 , TraesCS7A02G146500 , TraesCS7B02G049000 , TraesCS7A02G146700
Populus PNT33875 , PNT33874 , PNT33876 , PNT33873 , PNS92206 , PNS92207 , PNS92204 , PNS92205 , PNS92203 , PNS92208


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cDNA sequences
Sobic.010G064700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G005600 ubiquitin conjugating enzyme protein, putative, expressed K10581: ubiquitin-conjugating enzyme E2 O
2 Sobic.002G132000 serine/threonine-protein kinase AFC2, putative, expressed K08287: dual-specificity kinase
3 Sobic.006G271200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@cysteine protease ATG4, putative, expressed K08342: cysteine protease ATG4
4 Sobic.001G474700 expressed protein -
5 Sobic.009G126900 mitochondrial carrier protein, putative, expressed -
6 Sobic.003G329400 dihydropyrimidinase, putative, expressed K01464: DPYS, dht, dihydropyrimidinase
7 Sobic.006G115600 expressed protein -
8 Sobic.010G072800 exportin-7-A, putative, expressed K18460: XPO7, exportin-7
9 Sobic.004G264400 TBC domain containing protein, expressed -
10 Sobic.007G024700 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
11 Sobic.009G193700 transmembrane protein 56, putative, expressed -
12 Sobic.002G270500 UBX domain-containing protein, putative, expressed -
13 Sobic.001G207400 katanin p80 WD40 repeat-containing subunit B1 homolog 1, putative, expressed K18643: katanin p80 WD40 repeat-containing subunit B1
14 Sobic.001G427100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@mitochondrial carrier protein, putative, expressed K13354: SLC25A17, solute carrier family 25 (peroxisomal adenine nucleotide transporter), member 17
15 Sobic.008G062200 dehydrogenase E1 component domain containing protein, expressed K00166: BCKDHA, 2-oxoisovalerate dehydrogenase E1 component alpha subunit
16 Sobic.002G304000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@nitrilase, putative, expressed K01431: UPB1, beta-ureidopropionase
17 Sobic.001G322700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@5-oxoprolinase, putative, expressed K01469: OPLAH, OXP1, 5-oxoprolinase (ATP-hydrolysing)
18 Sobic.004G331100 WD domain and HEAT domain containing protein, putative, expressed K08333: PIK3R4, phosphoinositide-3-kinase, regulatory subunit 4
19 Sobic.001G440600 expressed protein -
20 Sobic.004G101900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@citrate synthase, putative, expressed K01647: CS, citrate synthase


Gene co-expression network
sample Sobic010G064700 Sobic010G064700 Sobic003G005600 Sobic003G005600 Sobic010G064700--Sobic003G005600 Sobic002G132000 Sobic002G132000 Sobic010G064700--Sobic002G132000 Sobic006G271200 Sobic006G271200 Sobic010G064700--Sobic006G271200 Sobic001G474700 Sobic001G474700 Sobic010G064700--Sobic001G474700 Sobic009G126900 Sobic009G126900 Sobic010G064700--Sobic009G126900 Sobic003G329400 Sobic003G329400 Sobic010G064700--Sobic003G329400 Sobic006G115600 Sobic006G115600 Sobic010G064700--Sobic006G115600 Sobic010G072800 Sobic010G072800 Sobic010G064700--Sobic010G072800 Sobic004G264400 Sobic004G264400 Sobic010G064700--Sobic004G264400 Sobic003G005600--Sobic009G126900 Sobic002G304000 Sobic002G304000 Sobic003G005600--Sobic002G304000 Sobic001G003000 Sobic001G003000 Sobic003G005600--Sobic001G003000 Sobic003G005600--Sobic003G329400 Sobic003G005600--Sobic006G271200 Sobic004G101900 Sobic004G101900 Sobic003G005600--Sobic004G101900 Sobic008G062200 Sobic008G062200 Sobic003G005600--Sobic008G062200 Sobic010G043400 Sobic010G043400 Sobic003G005600--Sobic010G043400 Sobic003G005600--Sobic010G064700 Sobic004G006200 Sobic004G006200 Sobic002G132000--Sobic004G006200 Sobic002G132000--Sobic004G264400 Sobic007G024700 Sobic007G024700 Sobic002G132000--Sobic007G024700 Sobic004G295800 Sobic004G295800 Sobic002G132000--Sobic004G295800 Sobic001G109800 Sobic001G109800 Sobic002G132000--Sobic001G109800 Sobic001G290000 Sobic001G290000 Sobic002G132000--Sobic001G290000 Sobic009G113000 Sobic009G113000 Sobic002G132000--Sobic009G113000 Sobic003G305200 Sobic003G305200 Sobic002G132000--Sobic003G305200 Sobic001G137100 Sobic001G137100 Sobic002G132000--Sobic001G137100 Sobic006G271200--Sobic001G003000 Sobic006G237900 Sobic006G237900 Sobic006G271200--Sobic006G237900 Sobic006G271200--Sobic009G126900 Sobic010G130200 Sobic010G130200 Sobic006G271200--Sobic010G130200 Sobic001G089800 Sobic001G089800 Sobic006G271200--Sobic001G089800 Sobic006G271200--Sobic010G043400 Sobic004G351300 Sobic004G351300 Sobic006G271200--Sobic004G351300 Sobic001G436900 Sobic001G436900 Sobic006G271200--Sobic001G436900 Sobic006G271200--Sobic010G072800 Sobic001G474700--Sobic009G126900 Sobic001G427100 Sobic001G427100 Sobic001G474700--Sobic001G427100 Sobic001G373200 Sobic001G373200 Sobic001G474700--Sobic001G373200 Sobic003G195500 Sobic003G195500 Sobic001G474700--Sobic003G195500 Sobic001G474700--Sobic003G005600 Sobic001G474700--Sobic004G295800 Sobic003G036800 Sobic003G036800 Sobic001G474700--Sobic003G036800 Sobic001G474700--Sobic007G024700 Sobic001G474700--Sobic002G132000 Sobic009G126900--Sobic010G043400 Sobic002G270500 Sobic002G270500 Sobic009G126900--Sobic002G270500 Sobic002G009700 Sobic002G009700 Sobic009G126900--Sobic002G009700 Sobic009G126900--Sobic006G271200 Sobic009G126900--Sobic001G003000 Sobic004G124200 Sobic004G124200 Sobic009G126900--Sobic004G124200 Sobic009G126900--Sobic003G005600 Sobic009G126900--Sobic003G329400 Sobic009G126900--Sobic004G101900 Sobic001G322700 Sobic001G322700 Sobic003G329400--Sobic001G322700 Sobic003G329400--Sobic008G062200 Sobic001G325200 Sobic001G325200 Sobic003G329400--Sobic001G325200 Sobic010G107000 Sobic010G107000 Sobic003G329400--Sobic010G107000 Sobic003G329400--Sobic002G304000 Sobic007G068100 Sobic007G068100 Sobic003G329400--Sobic007G068100 Sobic009G226300 Sobic009G226300 Sobic003G329400--Sobic009G226300 Sobic003G148800 Sobic003G148800 Sobic003G329400--Sobic003G148800 Sobic003G354400 Sobic003G354400 Sobic003G329400--Sobic003G354400 Sobic007G075400 Sobic007G075400 Sobic006G115600--Sobic007G075400 Sobic002G045600 Sobic002G045600 Sobic006G115600--Sobic002G045600 Sobic006G115600--Sobic004G264400 Sobic001G050200 Sobic001G050200 Sobic006G115600--Sobic001G050200 Sobic010G139600 Sobic010G139600 Sobic006G115600--Sobic010G139600 Sobic004G331100 Sobic004G331100 Sobic006G115600--Sobic004G331100 Sobic007G163100 Sobic007G163100 Sobic006G115600--Sobic007G163100 Sobic003G118200 Sobic003G118200 Sobic006G115600--Sobic003G118200 Sobic010G278200 Sobic010G278200 Sobic006G115600--Sobic010G278200 Sobic001G375600 Sobic001G375600 Sobic010G072800--Sobic001G375600 Sobic010G072800--Sobic006G271200 Sobic002G430000 Sobic002G430000 Sobic010G072800--Sobic002G430000 Sobic001G207400 Sobic001G207400 Sobic010G072800--Sobic001G207400 Sobic004G209800 Sobic004G209800 Sobic010G072800--Sobic004G209800 Sobic003G089000 Sobic003G089000 Sobic010G072800--Sobic003G089000 Sobic007G060201 Sobic007G060201 Sobic010G072800--Sobic007G060201 Sobic006G204900 Sobic006G204900 Sobic010G072800--Sobic006G204900 Sobic004G269200 Sobic004G269200 Sobic010G072800--Sobic004G269200 Sobic004G264400--Sobic001G109800 Sobic004G264400--Sobic009G113000 Sobic004G264400--Sobic002G132000 Sobic004G264400--Sobic007G024700 Sobic004G264400--Sobic004G331100 Sobic004G264400--Sobic006G115600 Sobic001G065000 Sobic001G065000 Sobic004G264400--Sobic001G065000 Sobic004G274200 Sobic004G274200 Sobic004G264400--Sobic004G274200 Sobic004G264400--Sobic007G075400
Octagon: transcription factors


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