Gene annotation
Transcriptome id Sobic.001G440600.1
Synonym Sb01g041410
Functional annotation expressed protein
UniProt C5WRK1
Pfam -
Panther DB PTHR34660 PTHR34660:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G20100 : -
RAP-DB (Rice) LOC_Os03g13810.1 : expressed protein
MaizeGDB (Corn) Zm00025a001513 , Zm00025a052919
Brachypodium KQK22632 , KQK22633
Barley HORVU4Hr1G064000.1 , HORVU4Hr1G064000.2 , HORVU4Hr1G064000.3 , HORVU4Hr1G064000.4 , HORVU4Hr1G064000.5 , HORVU4Hr1G064000.6 , HORVU4Hr1G064000.7
Wheat TraesCS4B02G228300 , TraesCS4B02G228300 , TraesCS4B02G228300 , TraesCS4A02G072400 , TraesCS4A02G072400 , TraesCS4A02G072400 , TraesCS4A02G072400 , TraesCS4D02G229200 , TraesCS4D02G229200
Populus -


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cDNA sequences
Sobic.001G440600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G005600 ubiquitin conjugating enzyme protein, putative, expressed K10581: ubiquitin-conjugating enzyme E2 O
2 Sobic.001G003000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@OTU-like cysteine protease family protein, putative, expressed -
3 Sobic.001G107600 - K18328: lariat debranching enzyme
4 Sobic.003G352600 ZOS1-16 - C2H2 zinc finger protein, expressed -
5 Sobic.003G036800 WD domain, G-beta repeat domain containing protein, expressed K10260: FBXW7, F-box and WD-40 domain protein 7
6 Sobic.002G427050 - -
7 Sobic.001G474700 expressed protein -
8 Sobic.007G060201 - -
9 Sobic.001G350700 Positive regulator of ABA(PubMedID : 30367619)@CAMK_CAMK_like.19 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K14498: serine/threonine-protein kinase SRK2
10 Sobic.006G104600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
11 Sobic.009G126900 mitochondrial carrier protein, putative, expressed -
12 Sobic.010G278200 expressed protein -
13 Sobic.007G047700 no apical meristem protein, putative, expressed -
14 Sobic.006G271200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@cysteine protease ATG4, putative, expressed K08342: cysteine protease ATG4
15 Sobic.001G217400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF1336 domain containing protein, expressed -
16 Sobic.002G009700 AMP-binding domain containing protein, expressed -
17 Sobic.010G072800 exportin-7-A, putative, expressed K18460: XPO7, exportin-7
18 Sobic.002G424000 transcription factor, putative, expressed K14431: transcription factor TGA
19 Sobic.002G427000 - -
20 Sobic.010G064700 two-component response regulator, putative, expressed K14491: two-component response regulator ARR-B family


Gene co-expression network
sample Sobic001G440600 Sobic001G440600 Sobic003G005600 Sobic003G005600 Sobic001G440600--Sobic003G005600 Sobic001G003000 Sobic001G003000 Sobic001G440600--Sobic001G003000 Sobic001G107600 Sobic001G107600 Sobic001G440600--Sobic001G107600 Sobic003G352600 Sobic003G352600 Sobic001G440600--Sobic003G352600 Sobic003G036800 Sobic003G036800 Sobic001G440600--Sobic003G036800 Sobic002G427050 Sobic002G427050 Sobic001G440600--Sobic002G427050 Sobic001G474700 Sobic001G474700 Sobic001G440600--Sobic001G474700 Sobic007G060201 Sobic007G060201 Sobic001G440600--Sobic007G060201 Sobic001G350700 Sobic001G350700 Sobic001G440600--Sobic001G350700 Sobic009G126900 Sobic009G126900 Sobic003G005600--Sobic009G126900 Sobic002G304000 Sobic002G304000 Sobic003G005600--Sobic002G304000 Sobic003G005600--Sobic001G003000 Sobic003G329400 Sobic003G329400 Sobic003G005600--Sobic003G329400 Sobic006G271200 Sobic006G271200 Sobic003G005600--Sobic006G271200 Sobic004G101900 Sobic004G101900 Sobic003G005600--Sobic004G101900 Sobic008G062200 Sobic008G062200 Sobic003G005600--Sobic008G062200 Sobic010G043400 Sobic010G043400 Sobic003G005600--Sobic010G043400 Sobic010G064700 Sobic010G064700 Sobic003G005600--Sobic010G064700 Sobic001G003000--Sobic006G271200 Sobic001G089800 Sobic001G089800 Sobic001G003000--Sobic001G089800 Sobic001G003000--Sobic009G126900 Sobic004G102400 Sobic004G102400 Sobic001G003000--Sobic004G102400 Sobic006G237900 Sobic006G237900 Sobic001G003000--Sobic006G237900 Sobic001G003000--Sobic003G005600 Sobic001G003000--Sobic010G043400 Sobic009G193700 Sobic009G193700 Sobic001G003000--Sobic009G193700 Sobic001G003000--Sobic001G350700 Sobic001G050200 Sobic001G050200 Sobic001G107600--Sobic001G050200 Sobic010G228400 Sobic010G228400 Sobic001G107600--Sobic010G228400 Sobic001G390800 Sobic001G390800 Sobic001G107600--Sobic001G390800 Sobic003G365300 Sobic003G365300 Sobic001G107600--Sobic003G365300 Sobic006G115600 Sobic006G115600 Sobic001G107600--Sobic006G115600 Sobic004G264400 Sobic004G264400 Sobic001G107600--Sobic004G264400 Sobic001G107600--Sobic002G427050 Sobic003G372500 Sobic003G372500 Sobic001G107600--Sobic003G372500 Sobic010G227100 Sobic010G227100 Sobic001G107600--Sobic010G227100 Sobic003G352600--Sobic001G390800 Sobic001G137100 Sobic001G137100 Sobic003G352600--Sobic001G137100 Sobic002G424000 Sobic002G424000 Sobic003G352600--Sobic002G424000 Sobic003G352600--Sobic009G126900 Sobic003G352600--Sobic001G107600 Sobic003G352600--Sobic001G440600 Sobic009G138100 Sobic009G138100 Sobic003G352600--Sobic009G138100 Sobic004G233200 Sobic004G233200 Sobic003G352600--Sobic004G233200 Sobic002G270500 Sobic002G270500 Sobic003G352600--Sobic002G270500 Sobic001G281100 Sobic001G281100 Sobic003G036800--Sobic001G281100 Sobic004G269200 Sobic004G269200 Sobic003G036800--Sobic004G269200 Sobic004G261600 Sobic004G261600 Sobic003G036800--Sobic004G261600 Sobic004G002400 Sobic004G002400 Sobic003G036800--Sobic004G002400 Sobic004G004200 Sobic004G004200 Sobic003G036800--Sobic004G004200 Sobic003G036800--Sobic007G060201 Sobic003G195500 Sobic003G195500 Sobic003G036800--Sobic003G195500 Sobic010G072800 Sobic010G072800 Sobic003G036800--Sobic010G072800 Sobic001G251200 Sobic001G251200 Sobic003G036800--Sobic001G251200 Sobic009G010600 Sobic009G010600 Sobic002G427050--Sobic009G010600 Sobic002G340100 Sobic002G340100 Sobic002G427050--Sobic002G340100 Sobic002G427050--Sobic001G050200 Sobic002G427050--Sobic001G390800 Sobic002G315200 Sobic002G315200 Sobic002G427050--Sobic002G315200 Sobic002G427050--Sobic007G060201 Sobic002G427050--Sobic001G107600 Sobic002G427050--Sobic001G137100 Sobic004G091100 Sobic004G091100 Sobic002G427050--Sobic004G091100 Sobic001G474700--Sobic009G126900 Sobic001G427100 Sobic001G427100 Sobic001G474700--Sobic001G427100 Sobic001G373200 Sobic001G373200 Sobic001G474700--Sobic001G373200 Sobic001G474700--Sobic003G195500 Sobic001G474700--Sobic003G005600 Sobic004G295800 Sobic004G295800 Sobic001G474700--Sobic004G295800 Sobic001G474700--Sobic003G036800 Sobic007G024700 Sobic007G024700 Sobic001G474700--Sobic007G024700 Sobic002G132000 Sobic002G132000 Sobic001G474700--Sobic002G132000 Sobic007G060201--Sobic001G281100 Sobic004G277200 Sobic004G277200 Sobic007G060201--Sobic004G277200 Sobic001G207400 Sobic001G207400 Sobic007G060201--Sobic001G207400 Sobic007G060201--Sobic004G269200 Sobic008G087866 Sobic008G087866 Sobic007G060201--Sobic008G087866 Sobic010G118950 Sobic010G118950 Sobic007G060201--Sobic010G118950 Sobic007G060201--Sobic001G050200 Sobic004G135400 Sobic004G135400 Sobic007G060201--Sobic004G135400 Sobic002G045600 Sobic002G045600 Sobic007G060201--Sobic002G045600 Sobic001G350700--Sobic001G003000 Sobic001G217400 Sobic001G217400 Sobic001G350700--Sobic001G217400 Sobic006G090500 Sobic006G090500 Sobic001G350700--Sobic006G090500 Sobic001G350700--Sobic006G271200 Sobic006G214200 Sobic006G214200 Sobic001G350700--Sobic006G214200 Sobic001G305500 Sobic001G305500 Sobic001G350700--Sobic001G305500 Sobic001G350700--Sobic001G440600 Sobic003G228100 Sobic003G228100 Sobic001G350700--Sobic003G228100 Sobic004G341200 Sobic004G341200 Sobic001G350700--Sobic004G341200
Octagon: transcription factors


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