Gene annotation
Transcriptome id Sobic.002G427000.1
Synonym
Functional annotation -
UniProt A0A1B6QGH4
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G427050 - -
2 Sobic.008G110600 expressed protein -
3 Sobic.005G182000 - -
4 Sobic.006G258800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@immutans protein, putative, expressed K17893: AOX1, ubiquinol oxidase
5 Sobic.003G126300 OsRhmbd2 - Putative Rhomboid homologue, expressed -
6 Sobic.004G004200 expressed protein -
7 Sobic.001G440600 expressed protein -
8 Sobic.001G101100 mitochondrial carrier protein, putative, expressed K15115: SLC25A32, solute carrier family 25 (mitochondrial folate transporter), member 32
9 Sobic.009G079300 receptor protein kinase-like, putative, expressed -
10 Sobic.001G180900 secretory carrier-associated membrane protein 4, putative, expressed -
11 Sobic.001G107600 - K18328: lariat debranching enzyme
12 Sobic.003G281900 regulator of chromosome condensation, putative, expressed -
13 Sobic.001G262700 hhH-GPD superfamily base excision DNA repair protein, putative, expressed -
14 Sobic.010G232600 solute carrier family 35 member F5, putative, expressed K15289: solute carrier family 35, member F5
15 Sobic.009G126900 mitochondrial carrier protein, putative, expressed -
16 Sobic.001G521500 callose synthase-like enzyme(PubMedID : 25311645)@1,3-beta-glucan synthase component domain containing protein, expressed K11000: callose synthase
17 Sobic.002G130800 potassium transporter, putative, expressed K03549: KUP system potassium uptake protein
18 Sobic.001G481900 SAC domain containing protein, putative, expressed -
19 Sobic.008G093000 ABC transporter, ATP-binding protein, putative, expressed K06185: ATP-binding cassette, subfamily F, member 2
20 Sobic.002G424000 transcription factor, putative, expressed K14431: transcription factor TGA


Gene co-expression network
sample Sobic002G427000 Sobic002G427000 Sobic002G427050 Sobic002G427050 Sobic002G427000--Sobic002G427050 Sobic008G110600 Sobic008G110600 Sobic002G427000--Sobic008G110600 Sobic005G182000 Sobic005G182000 Sobic002G427000--Sobic005G182000 Sobic006G258800 Sobic006G258800 Sobic002G427000--Sobic006G258800 Sobic003G126300 Sobic003G126300 Sobic002G427000--Sobic003G126300 Sobic004G004200 Sobic004G004200 Sobic002G427000--Sobic004G004200 Sobic001G440600 Sobic001G440600 Sobic002G427000--Sobic001G440600 Sobic001G101100 Sobic001G101100 Sobic002G427000--Sobic001G101100 Sobic009G079300 Sobic009G079300 Sobic002G427000--Sobic009G079300 Sobic009G010600 Sobic009G010600 Sobic002G427050--Sobic009G010600 Sobic002G340100 Sobic002G340100 Sobic002G427050--Sobic002G340100 Sobic001G050200 Sobic001G050200 Sobic002G427050--Sobic001G050200 Sobic001G390800 Sobic001G390800 Sobic002G427050--Sobic001G390800 Sobic002G315200 Sobic002G315200 Sobic002G427050--Sobic002G315200 Sobic007G060201 Sobic007G060201 Sobic002G427050--Sobic007G060201 Sobic001G107600 Sobic001G107600 Sobic002G427050--Sobic001G107600 Sobic001G137100 Sobic001G137100 Sobic002G427050--Sobic001G137100 Sobic004G091100 Sobic004G091100 Sobic002G427050--Sobic004G091100 Sobic006G034000 Sobic006G034000 Sobic008G110600--Sobic006G034000 Sobic008G110600--Sobic003G126300 Sobic010G130000 Sobic010G130000 Sobic008G110600--Sobic010G130000 Sobic004G178200 Sobic004G178200 Sobic008G110600--Sobic004G178200 Sobic003G036800 Sobic003G036800 Sobic008G110600--Sobic003G036800 Sobic001G091300 Sobic001G091300 Sobic008G110600--Sobic001G091300 Sobic008G110600--Sobic002G427050 Sobic008G093000 Sobic008G093000 Sobic008G110600--Sobic008G093000 Sobic008G110600--Sobic002G427000 Sobic009G161550 Sobic009G161550 Sobic005G182000--Sobic009G161550 Sobic009G139000 Sobic009G139000 Sobic005G182000--Sobic009G139000 Sobic010G141800 Sobic010G141800 Sobic005G182000--Sobic010G141800 Sobic005G182000--Sobic002G427050 Sobic001G262700 Sobic001G262700 Sobic005G182000--Sobic001G262700 Sobic001G481900 Sobic001G481900 Sobic005G182000--Sobic001G481900 Sobic005G182000--Sobic002G427000 Sobic005G182000--Sobic004G091100 Sobic003G247300 Sobic003G247300 Sobic005G182000--Sobic003G247300 Sobic006G258800--Sobic002G427000 Sobic006G258800--Sobic009G079300 Sobic007G131700 Sobic007G131700 Sobic006G258800--Sobic007G131700 Sobic006G258800--Sobic003G126300 Sobic003G281900 Sobic003G281900 Sobic006G258800--Sobic003G281900 Sobic006G115300 Sobic006G115300 Sobic006G258800--Sobic006G115300 Sobic001G521500 Sobic001G521500 Sobic006G258800--Sobic001G521500 Sobic006G258800--Sobic008G110600 Sobic005G209500 Sobic005G209500 Sobic006G258800--Sobic005G209500 Sobic004G228800 Sobic004G228800 Sobic003G126300--Sobic004G228800 Sobic003G126300--Sobic009G079300 Sobic003G126300--Sobic004G004200 Sobic003G126300--Sobic008G110600 Sobic004G261600 Sobic004G261600 Sobic003G126300--Sobic004G261600 Sobic003G126300--Sobic006G034000 Sobic003G272400 Sobic003G272400 Sobic003G126300--Sobic003G272400 Sobic007G056600 Sobic007G056600 Sobic003G126300--Sobic007G056600 Sobic006G033200 Sobic006G033200 Sobic003G126300--Sobic006G033200 Sobic004G004300 Sobic004G004300 Sobic004G004200--Sobic004G004300 Sobic001G281100 Sobic001G281100 Sobic004G004200--Sobic001G281100 Sobic002G430000 Sobic002G430000 Sobic004G004200--Sobic002G430000 Sobic004G269200 Sobic004G269200 Sobic004G004200--Sobic004G269200 Sobic004G004200--Sobic001G101100 Sobic001G251200 Sobic001G251200 Sobic004G004200--Sobic001G251200 Sobic004G004200--Sobic004G261600 Sobic002G270500 Sobic002G270500 Sobic004G004200--Sobic002G270500 Sobic004G004200--Sobic003G126300 Sobic003G005600 Sobic003G005600 Sobic001G440600--Sobic003G005600 Sobic001G003000 Sobic001G003000 Sobic001G440600--Sobic001G003000 Sobic001G440600--Sobic001G107600 Sobic003G352600 Sobic003G352600 Sobic001G440600--Sobic003G352600 Sobic001G440600--Sobic003G036800 Sobic001G440600--Sobic002G427050 Sobic001G474700 Sobic001G474700 Sobic001G440600--Sobic001G474700 Sobic001G440600--Sobic007G060201 Sobic001G350700 Sobic001G350700 Sobic001G440600--Sobic001G350700 Sobic001G101100--Sobic004G004200 Sobic010G232600 Sobic010G232600 Sobic001G101100--Sobic010G232600 Sobic001G101100--Sobic009G010600 Sobic001G101100--Sobic004G004300 Sobic001G101100--Sobic001G281100 Sobic001G101100--Sobic008G110600 Sobic006G052800 Sobic006G052800 Sobic001G101100--Sobic006G052800 Sobic006G126100 Sobic006G126100 Sobic001G101100--Sobic006G126100 Sobic001G101100--Sobic004G178200 Sobic009G000200 Sobic009G000200 Sobic009G079300--Sobic009G000200 Sobic004G236550 Sobic004G236550 Sobic009G079300--Sobic004G236550 Sobic009G079300--Sobic003G126300 Sobic003G316300 Sobic003G316300 Sobic009G079300--Sobic003G316300 Sobic007G025800 Sobic007G025800 Sobic009G079300--Sobic007G025800 Sobic001G180900 Sobic001G180900 Sobic009G079300--Sobic001G180900 Sobic009G079300--Sobic003G272400 Sobic009G136100 Sobic009G136100 Sobic009G079300--Sobic009G136100 Sobic003G367300 Sobic003G367300 Sobic009G079300--Sobic003G367300
Octagon: transcription factors


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