Gene annotation
Transcriptome id Sobic.001G363300.1
Synonym Sb01g034690
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence." (PubMedID : 27586543)
expressed protein
UniProt C5WZK3
Pfam -
Panther DB PTHR33115 PTHR33115:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G18980 : ARM repeat superfamily protein
RAP-DB (Rice) LOC_Os03g24730.1 : expressed protein
MaizeGDB (Corn) Zm00025a000614 , Zm00025a002576 , Zm00025a025554 , Zm00025a002577
Brachypodium KQK21594 , KQK23688
Barley HORVU4Hr1G079120.1 , HORVU6Hr1G080490.5 , HORVU6Hr1G080490.4 , HORVU6Hr1G080490.3 , HORVU6Hr1G080490.2 , HORVU6Hr1G080490.1
Wheat TraesCS6A02G331900 , TraesCS6D02G311200 , TraesCS6B02G362700 , TraesCS6B02G362700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G090600 expressed protein -
2 Sobic.005G217200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
3 Sobic.010G018100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@pollen ankyrin, putative, expressed K19044: E3 ubiquitin-protein ligase XBAT32/33
4 Sobic.003G363100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@sialyltransferase family domain containing protein, expressed -
5 Sobic.008G190900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@thioesterase family protein, putative, expressed -
6 Sobic.003G276000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@WRKY26, expressed -
7 Sobic.001G454200 - -
8 Sobic.001G385800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@No apical meristem protein, putative, expressed -
9 Sobic.002G241400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
10 Sobic.001G320200 phospholipase D, putative, expressed K01115: phospholipase D1/2
11 Sobic.010G162900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@reticuline oxidase-like protein precursor, putative, expressed -
12 Sobic.002G172900 OBP32pep, putative, expressed -
13 Sobic.002G301800 GRAS family transcription factor domain containing protein, expressed -
14 Sobic.007G196400 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K12818: DHX8, ATP-dependent RNA helicase DHX8/PRP22
15 Sobic.001G318900 glutathione S-transferase GSTU6, putative, expressed K00799: GST, glutathione S-transferase
16 Sobic.002G273700 Upregulated in cold susceptible sorghum under stress(PubMedID : 26645959)@cytochrome P450, putative, expressed -
17 Sobic.002G274800 "senescence-inducible chloroplast stay-green protein, GenBank annotation:AY850140"(PubMedID : 17513504)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@senescence-inducible chloroplast stay-green protein 1, putative, expressed -
18 Sobic.007G120401 - -
19 Sobic.003G000600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@WRKY1, expressed -
20 Sobic.004G283400 RING-H2 finger protein, putative, expressed -


Gene co-expression network
sample Sobic001G363300 Sobic001G363300 Sobic008G090600 Sobic008G090600 Sobic001G363300--Sobic008G090600 Sobic005G217200 Sobic005G217200 Sobic001G363300--Sobic005G217200 Sobic010G018100 Sobic010G018100 Sobic001G363300--Sobic010G018100 Sobic003G363100 Sobic003G363100 Sobic001G363300--Sobic003G363100 Sobic008G190900 Sobic008G190900 Sobic001G363300--Sobic008G190900 Sobic003G276000 Sobic003G276000 Sobic001G363300--Sobic003G276000 Sobic001G454200 Sobic001G454200 Sobic001G363300--Sobic001G454200 Sobic001G385800 Sobic001G385800 Sobic001G363300--Sobic001G385800 Sobic002G241400 Sobic002G241400 Sobic001G363300--Sobic002G241400 Sobic002G378800 Sobic002G378800 Sobic008G090600--Sobic002G378800 Sobic006G034000 Sobic006G034000 Sobic008G090600--Sobic006G034000 Sobic003G436300 Sobic003G436300 Sobic008G090600--Sobic003G436300 Sobic005G091600 Sobic005G091600 Sobic008G090600--Sobic005G091600 Sobic002G301800 Sobic002G301800 Sobic008G090600--Sobic002G301800 Sobic001G180900 Sobic001G180900 Sobic008G090600--Sobic001G180900 Sobic003G116900 Sobic003G116900 Sobic008G090600--Sobic003G116900 Sobic008G090600--Sobic001G363300 Sobic003G321300 Sobic003G321300 Sobic008G090600--Sobic003G321300 Sobic008G189200 Sobic008G189200 Sobic005G217200--Sobic008G189200 Sobic010G210200 Sobic010G210200 Sobic005G217200--Sobic010G210200 Sobic005G217200--Sobic003G363100 Sobic009G126900 Sobic009G126900 Sobic005G217200--Sobic009G126900 Sobic004G237600 Sobic004G237600 Sobic005G217200--Sobic004G237600 Sobic005G217200--Sobic003G276000 Sobic003G244600 Sobic003G244600 Sobic005G217200--Sobic003G244600 Sobic010G162900 Sobic010G162900 Sobic005G217200--Sobic010G162900 Sobic002G172900 Sobic002G172900 Sobic005G217200--Sobic002G172900 Sobic010G043400 Sobic010G043400 Sobic010G018100--Sobic010G043400 Sobic001G222200 Sobic001G222200 Sobic010G018100--Sobic001G222200 Sobic002G274800 Sobic002G274800 Sobic010G018100--Sobic002G274800 Sobic004G124200 Sobic004G124200 Sobic010G018100--Sobic004G124200 Sobic001G320200 Sobic001G320200 Sobic010G018100--Sobic001G320200 Sobic010G018100--Sobic003G363100 Sobic010G018100--Sobic008G189200 Sobic003G388251 Sobic003G388251 Sobic010G018100--Sobic003G388251 Sobic002G215800 Sobic002G215800 Sobic010G018100--Sobic002G215800 Sobic001G469500 Sobic001G469500 Sobic003G363100--Sobic001G469500 Sobic003G363100--Sobic005G217200 Sobic003G363100--Sobic010G018100 Sobic009G000200 Sobic009G000200 Sobic003G363100--Sobic009G000200 Sobic003G363100--Sobic008G189200 Sobic007G135000 Sobic007G135000 Sobic003G363100--Sobic007G135000 Sobic004G028600 Sobic004G028600 Sobic003G363100--Sobic004G028600 Sobic003G363100--Sobic002G274800 Sobic003G363100--Sobic003G276000 Sobic008G190900--Sobic008G189200 Sobic003G105800 Sobic003G105800 Sobic008G190900--Sobic003G105800 Sobic003G252300 Sobic003G252300 Sobic008G190900--Sobic003G252300 Sobic008G190900--Sobic002G274800 Sobic006G086100 Sobic006G086100 Sobic008G190900--Sobic006G086100 Sobic004G162400 Sobic004G162400 Sobic008G190900--Sobic004G162400 Sobic008G190900--Sobic002G172900 Sobic008G190900--Sobic009G126900 Sobic007G225900 Sobic007G225900 Sobic008G190900--Sobic007G225900 Sobic003G276000--Sobic010G162900 Sobic008G090800 Sobic008G090800 Sobic003G276000--Sobic008G090800 Sobic003G276000--Sobic001G454200 Sobic003G276000--Sobic005G217200 Sobic003G276000--Sobic008G189200 Sobic003G000600 Sobic003G000600 Sobic003G276000--Sobic003G000600 Sobic003G276000--Sobic010G018100 Sobic003G276000--Sobic003G363100 Sobic001G318900 Sobic001G318900 Sobic003G276000--Sobic001G318900 Sobic001G454200--Sobic003G276000 Sobic001G454200--Sobic008G090800 Sobic001G454200--Sobic003G363100 Sobic001G454200--Sobic010G162900 Sobic001G454200--Sobic010G018100 Sobic001G454200--Sobic005G217200 Sobic001G454200--Sobic001G318900 Sobic004G182300 Sobic004G182300 Sobic001G454200--Sobic004G182300 Sobic001G146200 Sobic001G146200 Sobic001G454200--Sobic001G146200 Sobic001G157200 Sobic001G157200 Sobic001G385800--Sobic001G157200 Sobic001G385800--Sobic002G241400 Sobic001G385800--Sobic001G363300 Sobic001G074200 Sobic001G074200 Sobic001G385800--Sobic001G074200 Sobic005G016800 Sobic005G016800 Sobic001G385800--Sobic005G016800 Sobic009G142200 Sobic009G142200 Sobic001G385800--Sobic009G142200 Sobic001G385800--Sobic005G217200 Sobic002G222800 Sobic002G222800 Sobic001G385800--Sobic002G222800 Sobic004G067200 Sobic004G067200 Sobic001G385800--Sobic004G067200 Sobic008G094700 Sobic008G094700 Sobic002G241400--Sobic008G094700 Sobic002G130700 Sobic002G130700 Sobic002G241400--Sobic002G130700 Sobic002G241400--Sobic005G217200 Sobic002G241400--Sobic004G067200 Sobic008G074700 Sobic008G074700 Sobic002G241400--Sobic008G074700 Sobic001G236200 Sobic001G236200 Sobic002G241400--Sobic001G236200 Sobic002G241400--Sobic001G385800 Sobic002G241400--Sobic001G180900 Sobic002G241400--Sobic005G091600
Octagon: transcription factors


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