Gene annotation
Transcriptome id Sobic.008G090600.1
Synonym Sb08g011320
Functional annotation expressed protein
UniProt C5YNG5
Pfam -
Panther DB PTHR33133 PTHR33133:SF7
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G11810 : -
RAP-DB (Rice) LOC_Os12g15520.2 : expressed protein
MaizeGDB (Corn) Zm00025a054093
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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cDNA sequences
Sobic.008G090600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G378800 GRAM domain containing protein, expressed -
2 Sobic.006G034000 DHHC zinc finger domain containing protein, expressed K18932: palmitoyltransferase
3 Sobic.003G436300 expressed protein -
4 Sobic.005G091600 aquaporin protein, putative, expressed K09875: aquaporin SIP
5 Sobic.002G301800 GRAS family transcription factor domain containing protein, expressed -
6 Sobic.001G180900 secretory carrier-associated membrane protein 4, putative, expressed -
7 Sobic.003G116900 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@dynein light chain type 1 domain containing protein, expressed K10418: dynein light chain LC8-type
8 Sobic.001G363300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
9 Sobic.003G321300 disease resistance protein RPS2, putative, expressed K13459: disease resistance protein RPS2
10 Sobic.001G323000 UBX domain-containing protein, putative, expressed K18726: FAF2, FAS-associated factor 2
11 Sobic.008G147700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein K14169: CTU2, cytoplasmic tRNA 2-thiolation protein 2
12 Sobic.002G172900 OBP32pep, putative, expressed -
13 Sobic.006G194500 expressed protein -
14 Sobic.008G074700 - -
15 Sobic.010G264200 UPF0183 protein, putative, expressed -
16 Sobic.001G117300 expressed protein -
17 Sobic.001G123000 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed -
18 Sobic.001G078500 expressed protein -
19 Sobic.005G203800 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@lipase precursor, putative, expressed -
20 Sobic.006G114800 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@ras-related protein, putative, expressed K07877: Ras-related protein Rab-2A


Gene co-expression network
sample Sobic008G090600 Sobic008G090600 Sobic002G378800 Sobic002G378800 Sobic008G090600--Sobic002G378800 Sobic006G034000 Sobic006G034000 Sobic008G090600--Sobic006G034000 Sobic003G436300 Sobic003G436300 Sobic008G090600--Sobic003G436300 Sobic005G091600 Sobic005G091600 Sobic008G090600--Sobic005G091600 Sobic002G301800 Sobic002G301800 Sobic008G090600--Sobic002G301800 Sobic001G180900 Sobic001G180900 Sobic008G090600--Sobic001G180900 Sobic003G116900 Sobic003G116900 Sobic008G090600--Sobic003G116900 Sobic001G363300 Sobic001G363300 Sobic008G090600--Sobic001G363300 Sobic003G321300 Sobic003G321300 Sobic008G090600--Sobic003G321300 Sobic002G378800--Sobic001G180900 Sobic001G057800 Sobic001G057800 Sobic002G378800--Sobic001G057800 Sobic006G114800 Sobic006G114800 Sobic002G378800--Sobic006G114800 Sobic001G323000 Sobic001G323000 Sobic002G378800--Sobic001G323000 Sobic006G217700 Sobic006G217700 Sobic002G378800--Sobic006G217700 Sobic002G378800--Sobic008G090600 Sobic004G102400 Sobic004G102400 Sobic002G378800--Sobic004G102400 Sobic002G378800--Sobic006G034000 Sobic009G126900 Sobic009G126900 Sobic002G378800--Sobic009G126900 Sobic003G312200 Sobic003G312200 Sobic006G034000--Sobic003G312200 Sobic006G034000--Sobic001G323000 Sobic006G034000--Sobic003G436300 Sobic006G148200 Sobic006G148200 Sobic006G034000--Sobic006G148200 Sobic006G034000--Sobic001G180900 Sobic010G130000 Sobic010G130000 Sobic006G034000--Sobic010G130000 Sobic001G091300 Sobic001G091300 Sobic006G034000--Sobic001G091300 Sobic008G110600 Sobic008G110600 Sobic006G034000--Sobic008G110600 Sobic009G228700 Sobic009G228700 Sobic006G034000--Sobic009G228700 Sobic003G436300--Sobic006G034000 Sobic001G085100 Sobic001G085100 Sobic003G436300--Sobic001G085100 Sobic010G020300 Sobic010G020300 Sobic003G436300--Sobic010G020300 Sobic003G436300--Sobic001G057800 Sobic003G436300--Sobic003G116900 Sobic003G436300--Sobic003G312200 Sobic003G436300--Sobic001G323000 Sobic004G348900 Sobic004G348900 Sobic003G436300--Sobic004G348900 Sobic001G296900 Sobic001G296900 Sobic003G436300--Sobic001G296900 Sobic001G123000 Sobic001G123000 Sobic005G091600--Sobic001G123000 Sobic008G128600 Sobic008G128600 Sobic005G091600--Sobic008G128600 Sobic009G054700 Sobic009G054700 Sobic005G091600--Sobic009G054700 Sobic010G168600 Sobic010G168600 Sobic005G091600--Sobic010G168600 Sobic001G078500 Sobic001G078500 Sobic005G091600--Sobic001G078500 Sobic005G091600--Sobic008G090600 Sobic008G147700 Sobic008G147700 Sobic005G091600--Sobic008G147700 Sobic003G344900 Sobic003G344900 Sobic005G091600--Sobic003G344900 Sobic009G028800 Sobic009G028800 Sobic005G091600--Sobic009G028800 Sobic005G229400 Sobic005G229400 Sobic002G301800--Sobic005G229400 Sobic010G009400 Sobic010G009400 Sobic002G301800--Sobic010G009400 Sobic002G301800--Sobic008G090600 Sobic003G413500 Sobic003G413500 Sobic002G301800--Sobic003G413500 Sobic009G138200 Sobic009G138200 Sobic002G301800--Sobic009G138200 Sobic004G281300 Sobic004G281300 Sobic002G301800--Sobic004G281300 Sobic004G237600 Sobic004G237600 Sobic002G301800--Sobic004G237600 Sobic002G301800--Sobic003G436300 Sobic002G251700 Sobic002G251700 Sobic002G301800--Sobic002G251700 Sobic001G180900--Sobic006G034000 Sobic004G234900 Sobic004G234900 Sobic001G180900--Sobic004G234900 Sobic001G180900--Sobic002G378800 Sobic009G079300 Sobic009G079300 Sobic001G180900--Sobic009G079300 Sobic001G180900--Sobic009G126900 Sobic004G274400 Sobic004G274400 Sobic001G180900--Sobic004G274400 Sobic006G225600 Sobic006G225600 Sobic001G180900--Sobic006G225600 Sobic001G180900--Sobic008G110600 Sobic003G126300 Sobic003G126300 Sobic001G180900--Sobic003G126300 Sobic003G116900--Sobic003G436300 Sobic001G270400 Sobic001G270400 Sobic003G116900--Sobic001G270400 Sobic004G337200 Sobic004G337200 Sobic003G116900--Sobic004G337200 Sobic008G074700 Sobic008G074700 Sobic003G116900--Sobic008G074700 Sobic003G116900--Sobic006G034000 Sobic002G105200 Sobic002G105200 Sobic003G116900--Sobic002G105200 Sobic003G116900--Sobic010G020300 Sobic003G365000 Sobic003G365000 Sobic003G116900--Sobic003G365000 Sobic007G024700 Sobic007G024700 Sobic003G116900--Sobic007G024700 Sobic001G363300--Sobic008G090600 Sobic005G217200 Sobic005G217200 Sobic001G363300--Sobic005G217200 Sobic010G018100 Sobic010G018100 Sobic001G363300--Sobic010G018100 Sobic003G363100 Sobic003G363100 Sobic001G363300--Sobic003G363100 Sobic008G190900 Sobic008G190900 Sobic001G363300--Sobic008G190900 Sobic003G276000 Sobic003G276000 Sobic001G363300--Sobic003G276000 Sobic001G454200 Sobic001G454200 Sobic001G363300--Sobic001G454200 Sobic001G385800 Sobic001G385800 Sobic001G363300--Sobic001G385800 Sobic002G241400 Sobic002G241400 Sobic001G363300--Sobic002G241400 Sobic007G148700 Sobic007G148700 Sobic003G321300--Sobic007G148700 Sobic003G321300--Sobic002G378800 Sobic001G074200 Sobic001G074200 Sobic003G321300--Sobic001G074200 Sobic002G187300 Sobic002G187300 Sobic003G321300--Sobic002G187300 Sobic003G321300--Sobic001G057800 Sobic003G321300--Sobic008G090600 Sobic003G047100 Sobic003G047100 Sobic003G321300--Sobic003G047100 Sobic010G080200 Sobic010G080200 Sobic003G321300--Sobic010G080200 Sobic003G321300--Sobic003G436300
Octagon: transcription factors


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