Gene annotation
Transcriptome id Sobic.001G173900.1
Synonym ACR4, Sb01g015160
Functional annotation ACT domain containing protein, expressed
UniProt C5WT97
Pfam PF01842
Panther DB PTHR31096 PTHR31096:SF10
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016597; amino acid binding GO:0008152metabolic process


Orthologs (automatic annotation)
TAIR AT1G69040 : ACT domain repeat 4
RAP-DB (Rice) LOC_Os03g40100.1 : ACT domain containing protein, expressed
MaizeGDB (Corn) Zm00025a007198
Brachypodium KQK14278
Barley HORVU5Hr1G076100.8 , HORVU5Hr1G076100.5 , HORVU5Hr1G076100.9 , HORVU5Hr1G076100.7 , HORVU5Hr1G076100.6 , HORVU5Hr1G076100.4 , HORVU5Hr1G076100.3 , HORVU5Hr1G076100.2 , HORVU5Hr1G076100.1
Wheat TraesCS5B02G284000 , TraesCS5B02G284000 , TraesCS5A02G284800 , TraesCS5A02G284800 , TraesCS5D02G292200
Populus -


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cDNA sequences
Sobic.001G173900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G092100 - -
2 Sobic.007G047700 no apical meristem protein, putative, expressed -
3 Sobic.003G278500 RING finger and CHY zinc finger domain-containing protein 1, putative, expressed K10144: RCHY1, RING finger and CHY zinc finger domain-containing protein 1
4 Sobic.003G056100 transcription initiation factor, putative, expressed K03129: transcription initiation factor TFIID subunit 4
5 Sobic.008G191100 nodulin, putative, expressed -
6 Sobic.003G328600 proline-rich family protein, putative, expressed -
7 Sobic.003G248200 NLI interacting factor-like phosphatase, putative, expressed -
8 Sobic.009G167600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
9 Sobic.002G215100 exo70 exocyst complex subunit, putative, expressed K07195: EXOC7, exocyst complex component 7
10 Sobic.009G056800 growth inhibition and differentiation-related protein 88, putative, expressed -
11 Sobic.001G125200 HEAT repeat family protein, putative, expressed -
12 Sobic.003G036300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oxidoreductase, putative, expressed -
13 Sobic.001G043100 EMB1745, putative, expressed K18723: nucleoporin GLE1
14 Sobic.001G220300 serine/threonine-protein phosphatase 2A regulatory subunit B subunitbeta, putative, expressed K11583: serine/threonine-protein phosphatase 2A regulatory subunit B''
15 Sobic.001G440600 expressed protein -
16 Sobic.003G036800 WD domain, G-beta repeat domain containing protein, expressed K10260: FBXW7, F-box and WD-40 domain protein 7
17 Sobic.001G409600 KH domain containing protein, putative, expressed K13095: splicing factor 1
18 Sobic.001G481900 SAC domain containing protein, putative, expressed -
19 Sobic.002G315200 DNA-binding bromodomain-containing protein, putative, expressed -
20 Sobic.009G138100 disease resistance protein RGA3, putative, expressed -


Gene co-expression network
sample Sobic001G173900 Sobic001G173900 Sobic004G092100 Sobic004G092100 Sobic001G173900--Sobic004G092100 Sobic007G047700 Sobic007G047700 Sobic001G173900--Sobic007G047700 Sobic003G278500 Sobic003G278500 Sobic001G173900--Sobic003G278500 Sobic003G056100 Sobic003G056100 Sobic001G173900--Sobic003G056100 Sobic008G191100 Sobic008G191100 Sobic001G173900--Sobic008G191100 Sobic003G328600 Sobic003G328600 Sobic001G173900--Sobic003G328600 Sobic003G248200 Sobic003G248200 Sobic001G173900--Sobic003G248200 Sobic009G167600 Sobic009G167600 Sobic001G173900--Sobic009G167600 Sobic002G215100 Sobic002G215100 Sobic001G173900--Sobic002G215100 Sobic004G092100--Sobic001G173900 Sobic003G087400 Sobic003G087400 Sobic004G092100--Sobic003G087400 Sobic007G186900 Sobic007G186900 Sobic004G092100--Sobic007G186900 Sobic004G092100--Sobic003G278500 Sobic004G091100 Sobic004G091100 Sobic004G092100--Sobic004G091100 Sobic001G251200 Sobic001G251200 Sobic004G092100--Sobic001G251200 Sobic001G125200 Sobic001G125200 Sobic004G092100--Sobic001G125200 Sobic005G019200 Sobic005G019200 Sobic004G092100--Sobic005G019200 Sobic004G351100 Sobic004G351100 Sobic004G092100--Sobic004G351100 Sobic003G036800 Sobic003G036800 Sobic007G047700--Sobic003G036800 Sobic008G123500 Sobic008G123500 Sobic007G047700--Sobic008G123500 Sobic004G002100 Sobic004G002100 Sobic007G047700--Sobic004G002100 Sobic009G184700 Sobic009G184700 Sobic007G047700--Sobic009G184700 Sobic001G095500 Sobic001G095500 Sobic007G047700--Sobic001G095500 Sobic001G440600 Sobic001G440600 Sobic007G047700--Sobic001G440600 Sobic003G281900 Sobic003G281900 Sobic007G047700--Sobic003G281900 Sobic007G047700--Sobic001G173900 Sobic003G195500 Sobic003G195500 Sobic007G047700--Sobic003G195500 Sobic003G278500--Sobic007G186900 Sobic003G029700 Sobic003G029700 Sobic003G278500--Sobic003G029700 Sobic010G101800 Sobic010G101800 Sobic003G278500--Sobic010G101800 Sobic003G397800 Sobic003G397800 Sobic003G278500--Sobic003G397800 Sobic001G152280 Sobic001G152280 Sobic003G278500--Sobic001G152280 Sobic007G217000 Sobic007G217000 Sobic003G278500--Sobic007G217000 Sobic007G167500 Sobic007G167500 Sobic003G278500--Sobic007G167500 Sobic003G278500--Sobic003G056100 Sobic010G097600 Sobic010G097600 Sobic003G278500--Sobic010G097600 Sobic003G056100--Sobic001G125200 Sobic002G006900 Sobic002G006900 Sobic003G056100--Sobic002G006900 Sobic008G067600 Sobic008G067600 Sobic003G056100--Sobic008G067600 Sobic001G512700 Sobic001G512700 Sobic003G056100--Sobic001G512700 Sobic001G497300 Sobic001G497300 Sobic003G056100--Sobic001G497300 Sobic002G315200 Sobic002G315200 Sobic003G056100--Sobic002G315200 Sobic009G104201 Sobic009G104201 Sobic003G056100--Sobic009G104201 Sobic003G056100--Sobic003G087400 Sobic003G056100--Sobic007G217000 Sobic004G295800 Sobic004G295800 Sobic008G191100--Sobic004G295800 Sobic001G290000 Sobic001G290000 Sobic008G191100--Sobic001G290000 Sobic002G132000 Sobic002G132000 Sobic008G191100--Sobic002G132000 Sobic006G214500 Sobic006G214500 Sobic008G191100--Sobic006G214500 Sobic001G373200 Sobic001G373200 Sobic008G191100--Sobic001G373200 Sobic003G093300 Sobic003G093300 Sobic008G191100--Sobic003G093300 Sobic003G433100 Sobic003G433100 Sobic008G191100--Sobic003G433100 Sobic007G024700 Sobic007G024700 Sobic008G191100--Sobic007G024700 Sobic009G126900 Sobic009G126900 Sobic008G191100--Sobic009G126900 Sobic009G219000 Sobic009G219000 Sobic003G328600--Sobic009G219000 Sobic007G006900 Sobic007G006900 Sobic003G328600--Sobic007G006900 Sobic010G249100 Sobic010G249100 Sobic003G328600--Sobic010G249100 Sobic001G425800 Sobic001G425800 Sobic003G328600--Sobic001G425800 Sobic002G134600 Sobic002G134600 Sobic003G328600--Sobic002G134600 Sobic009G042700 Sobic009G042700 Sobic003G328600--Sobic009G042700 Sobic006G131000 Sobic006G131000 Sobic003G328600--Sobic006G131000 Sobic003G328600--Sobic003G278500 Sobic003G328600--Sobic003G056100 Sobic003G248200--Sobic001G512700 Sobic001G356600 Sobic001G356600 Sobic003G248200--Sobic001G356600 Sobic008G179700 Sobic008G179700 Sobic003G248200--Sobic008G179700 Sobic004G066200 Sobic004G066200 Sobic003G248200--Sobic004G066200 Sobic008G047800 Sobic008G047800 Sobic003G248200--Sobic008G047800 Sobic006G200600 Sobic006G200600 Sobic003G248200--Sobic006G200600 Sobic003G081000 Sobic003G081000 Sobic003G248200--Sobic003G081000 Sobic004G274200 Sobic004G274200 Sobic003G248200--Sobic004G274200 Sobic002G297200 Sobic002G297200 Sobic003G248200--Sobic002G297200 Sobic003G119800 Sobic003G119800 Sobic009G167600--Sobic003G119800 Sobic005G104400 Sobic005G104400 Sobic009G167600--Sobic005G104400 Sobic003G044200 Sobic003G044200 Sobic009G167600--Sobic003G044200 Sobic006G218700 Sobic006G218700 Sobic009G167600--Sobic006G218700 Sobic002G400200 Sobic002G400200 Sobic009G167600--Sobic002G400200 Sobic008G025900 Sobic008G025900 Sobic009G167600--Sobic008G025900 Sobic010G025300 Sobic010G025300 Sobic009G167600--Sobic010G025300 Sobic009G167600--Sobic003G433100 Sobic009G134600 Sobic009G134600 Sobic009G167600--Sobic009G134600 Sobic002G215100--Sobic010G101800 Sobic007G132400 Sobic007G132400 Sobic002G215100--Sobic007G132400 Sobic002G310200 Sobic002G310200 Sobic002G215100--Sobic002G310200 Sobic007G104800 Sobic007G104800 Sobic002G215100--Sobic007G104800 Sobic006G195700 Sobic006G195700 Sobic002G215100--Sobic006G195700 Sobic009G056800 Sobic009G056800 Sobic002G215100--Sobic009G056800 Sobic010G028800 Sobic010G028800 Sobic002G215100--Sobic010G028800 Sobic007G118200 Sobic007G118200 Sobic002G215100--Sobic007G118200 Sobic001G409600 Sobic001G409600 Sobic002G215100--Sobic001G409600
Octagon: transcription factors


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