Gene annotation
Transcriptome id Sobic.004G233000.1
Synonym
Functional annotation -
UniProt A0A194YRB3
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G298600 ribosomal L18p/L5e family protein, expressed -
2 Sobic.009G232700 splicing factor U2AF, putative, expressed K12836: splicing factor U2AF 35 kDa subunit
3 Sobic.008G165700 expressed protein -
4 Sobic.002G187801 - K03134: transcription initiation factor TFIID subunit 10
5 Sobic.006G038400 YL1 nuclear protein C-terminal domain containing protein, expressed K11667: INO80C, INO80 complex subunit C
6 Sobic.008G189400 NBS-LRR disease resistance protein, putative, expressed -
7 Sobic.001G429300 STE_MEKK_ste11_MAP3K.12 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K13414: mitogen-activated protein kinase kinase kinase 1
8 Sobic.010G280100 expressed protein -
9 Sobic.009G233300 60S ribosomal protein L18a-1, putative, expressed -
10 Sobic.006G109300 protein binding protein, putative, expressed -
11 Sobic.006G273200 "PKc_like super family, protein kjinases, catalytic domain"(PubMedID : 29491869)@protein kinase family protein, putative, expressed K14500: BR-signaling kinase
12 Sobic.007G152101 - K11982: E3 ubiquitin-protein ligase RNF115/126
13 Sobic.009G114800 thioesterase family protein, putative, expressed K17362: acyl-coenzyme A thioesterase 13
14 Sobic.003G308700 BTBA2 - Bric-a-Brac,Tramtrack, Broad Complex BTB domain with Ankyrin repeat region, expressed K14508: regulatory protein NPR1
15 Sobic.006G171700 - -
16 Sobic.007G079700 pentatricopeptide, putative, expressed -
17 Sobic.010G268300 protein phosphatase 2C, putative, expressed -
18 Sobic.002G365100 RNA recognition motif containing protein, putative, expressed -
19 Sobic.004G227300 vacuolar protein-sorting protein bro1, putative, expressed K12200: PDCD6IP, ALIX, programmed cell death 6-interacting protein
20 Sobic.001G261597 - K07904: Ras-related protein Rab-11A


Gene co-expression network
sample Sobic004G233000 Sobic004G233000 Sobic001G298600 Sobic001G298600 Sobic004G233000--Sobic001G298600 Sobic009G232700 Sobic009G232700 Sobic004G233000--Sobic009G232700 Sobic008G165700 Sobic008G165700 Sobic004G233000--Sobic008G165700 Sobic002G187801 Sobic002G187801 Sobic004G233000--Sobic002G187801 Sobic006G038400 Sobic006G038400 Sobic004G233000--Sobic006G038400 Sobic008G189400 Sobic008G189400 Sobic004G233000--Sobic008G189400 Sobic001G429300 Sobic001G429300 Sobic004G233000--Sobic001G429300 Sobic010G280100 Sobic010G280100 Sobic004G233000--Sobic010G280100 Sobic009G233300 Sobic009G233300 Sobic004G233000--Sobic009G233300 Sobic007G132400 Sobic007G132400 Sobic001G298600--Sobic007G132400 Sobic006G228500 Sobic006G228500 Sobic001G298600--Sobic006G228500 Sobic004G121100 Sobic004G121100 Sobic001G298600--Sobic004G121100 Sobic001G107500 Sobic001G107500 Sobic001G298600--Sobic001G107500 Sobic002G310200 Sobic002G310200 Sobic001G298600--Sobic002G310200 Sobic006G273200 Sobic006G273200 Sobic001G298600--Sobic006G273200 Sobic009G215800 Sobic009G215800 Sobic001G298600--Sobic009G215800 Sobic003G176600 Sobic003G176600 Sobic001G298600--Sobic003G176600 Sobic001G281600 Sobic001G281600 Sobic001G298600--Sobic001G281600 Sobic009G232700--Sobic001G107500 Sobic003G298100 Sobic003G298100 Sobic009G232700--Sobic003G298100 Sobic009G022200 Sobic009G022200 Sobic009G232700--Sobic009G022200 Sobic008G175800 Sobic008G175800 Sobic009G232700--Sobic008G175800 Sobic007G205800 Sobic007G205800 Sobic009G232700--Sobic007G205800 Sobic001G368400 Sobic001G368400 Sobic009G232700--Sobic001G368400 Sobic001G131800 Sobic001G131800 Sobic009G232700--Sobic001G131800 Sobic003G324000 Sobic003G324000 Sobic009G232700--Sobic003G324000 Sobic010G056200 Sobic010G056200 Sobic009G232700--Sobic010G056200 Sobic008G165700--Sobic006G273200 Sobic008G165700--Sobic009G233300 Sobic010G268300 Sobic010G268300 Sobic008G165700--Sobic010G268300 Sobic008G165700--Sobic002G187801 Sobic002G365100 Sobic002G365100 Sobic008G165700--Sobic002G365100 Sobic001G191100 Sobic001G191100 Sobic008G165700--Sobic001G191100 Sobic003G123000 Sobic003G123000 Sobic008G165700--Sobic003G123000 Sobic003G018900 Sobic003G018900 Sobic008G165700--Sobic003G018900 Sobic003G000150 Sobic003G000150 Sobic008G165700--Sobic003G000150 Sobic002G187801--Sobic008G165700 Sobic001G253700 Sobic001G253700 Sobic002G187801--Sobic001G253700 Sobic002G187801--Sobic009G233300 Sobic002G187801--Sobic006G273200 Sobic001G284800 Sobic001G284800 Sobic002G187801--Sobic001G284800 Sobic004G003501 Sobic004G003501 Sobic002G187801--Sobic004G003501 Sobic002G187801--Sobic003G000150 Sobic002G092300 Sobic002G092300 Sobic002G187801--Sobic002G092300 Sobic002G187801--Sobic002G365100 Sobic003G045400 Sobic003G045400 Sobic006G038400--Sobic003G045400 Sobic006G038400--Sobic009G232700 Sobic009G140700 Sobic009G140700 Sobic006G038400--Sobic009G140700 Sobic004G150400 Sobic004G150400 Sobic006G038400--Sobic004G150400 Sobic004G305600 Sobic004G305600 Sobic006G038400--Sobic004G305600 Sobic009G114800 Sobic009G114800 Sobic006G038400--Sobic009G114800 Sobic008G062000 Sobic008G062000 Sobic006G038400--Sobic008G062000 Sobic007G079700 Sobic007G079700 Sobic006G038400--Sobic007G079700 Sobic001G512600 Sobic001G512600 Sobic006G038400--Sobic001G512600 Sobic003G119800 Sobic003G119800 Sobic008G189400--Sobic003G119800 Sobic009G137800 Sobic009G137800 Sobic008G189400--Sobic009G137800 Sobic010G056000 Sobic010G056000 Sobic008G189400--Sobic010G056000 Sobic008G189400--Sobic006G273200 Sobic001G351700 Sobic001G351700 Sobic008G189400--Sobic001G351700 Sobic008G189400--Sobic002G365100 Sobic007G145200 Sobic007G145200 Sobic008G189400--Sobic007G145200 Sobic009G195300 Sobic009G195300 Sobic008G189400--Sobic009G195300 Sobic008G025900 Sobic008G025900 Sobic008G189400--Sobic008G025900 Sobic001G429300--Sobic010G268300 Sobic001G429300--Sobic010G280100 Sobic001G429300--Sobic006G273200 Sobic002G122600 Sobic002G122600 Sobic001G429300--Sobic002G122600 Sobic004G083700 Sobic004G083700 Sobic001G429300--Sobic004G083700 Sobic001G429300--Sobic008G165700 Sobic001G429300--Sobic003G018900 Sobic006G171700 Sobic006G171700 Sobic001G429300--Sobic006G171700 Sobic001G429300--Sobic001G281600 Sobic009G198900 Sobic009G198900 Sobic010G280100--Sobic009G198900 Sobic004G119000 Sobic004G119000 Sobic010G280100--Sobic004G119000 Sobic010G280100--Sobic003G324000 Sobic007G052900 Sobic007G052900 Sobic010G280100--Sobic007G052900 Sobic008G136200 Sobic008G136200 Sobic010G280100--Sobic008G136200 Sobic009G087800 Sobic009G087800 Sobic010G280100--Sobic009G087800 Sobic010G280100--Sobic007G205800 Sobic010G280100--Sobic001G368400 Sobic010G280100--Sobic006G273200 Sobic009G233300--Sobic006G273200 Sobic009G233300--Sobic008G165700 Sobic009G233300--Sobic002G187801 Sobic006G119800 Sobic006G119800 Sobic009G233300--Sobic006G119800 Sobic001G387600 Sobic001G387600 Sobic009G233300--Sobic001G387600 Sobic001G372500 Sobic001G372500 Sobic009G233300--Sobic001G372500 Sobic009G233300--Sobic001G284800 Sobic003G309900 Sobic003G309900 Sobic009G233300--Sobic003G309900 Sobic009G233300--Sobic003G176600
Octagon: transcription factors


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