Gene annotation
Transcriptome id Sobic.003G233200.4,Sobic.003G233200.2,Sobic.003G233200.5,Sobic.003G233200.3
Synonym Sb03g029100
Functional annotation cinnamoyl-CoA reductase-related, putative, expressed
UniProt A0A1W0VYK2 , A0A1W0VYK4
Pfam PF01073
Panther DB PTHR10366 PTHR10366:SF453
NCBI CDD KOG1502; Flavonol reductase/cinnamoyl-CoA reductase
KEGG Orthology -
Gene Ontology GO:0016616; oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor GO:0006694steroid biosynthetic process GO:00038543-beta-hydroxy-delta5-steroid dehydrogenase activity


Orthologs (automatic annotation)
TAIR AT5G14700 : NAD(P)-binding Rossmann-fold superfamily protein
RAP-DB (Rice) LOC_Os01g45200.1 : cinnamoyl-CoA reductase-related, putative, expressed
MaizeGDB (Corn) Zm00025a028296 , Zm00025a038650
Brachypodium PNT72458 , KQK04642 , KQK08899 , KQK08900 , KQK08901 , KQK08902
Barley HORVU3Hr1G057200.3 , HORVU3Hr1G057200.2 , HORVU3Hr1G057200.1 , HORVU3Hr1G057200.5 , HORVU3Hr1G057200.4 , HORVU1Hr1G091350.1 , HORVU1Hr1G091350.3 , HORVU1Hr1G091350.2 , HORVU1Hr1G091400.4 , HORVU1Hr1G091400.1 , HORVU1Hr1G091400.3 , HORVU1Hr1G091400.2
Wheat TraesCS3A02G229700 , TraesCS1B02G447900 , TraesCS3D02G223500 , TraesCS3B02G259000 , TraesCS1A02G417800 , TraesCS1D02G425400 , TraesCS1D02G425400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G279100 CAMK_CAMK_like.15 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
2 Sobic.008G187100 early-responsive to dehydration protein-related, putative, expressed -
3 Sobic.002G148100 CRAL/TRIO domain containing protein, expressed -
4 Sobic.003G373600 -(PubMedID : 26976818)@serine hydroxymethyltransferase, mitochondrial precursor, putative, expressed K00600: glyA, glycine hydroxymethyltransferase
5 Sobic.002G420900 stress responsive protein, putative, expressed -
6 Sobic.002G295100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@NADPH reductase, putative, expressed K00327: NADPH-ferrihemoprotein reductase
7 Sobic.004G113100 "OsSPMS1(Ortholog in rice:Tao et al., 2018)"(PubMedID : 31659881)@spermidine synthase, putative, expressed K00797: speE, SRM, spermidine synthase
8 Sobic.002G279700 3-dehydroquinate synthase, putative, expressed K01735: 3-dehydroquinate synthase
9 Sobic.007G079400 cytidylyltransferase domain containing protein, expressed K00967: ethanolamine-phosphate cytidylyltransferase
10 Sobic.003G186900 - K12812: DDX39B, UAP56, ATP-dependent RNA helicase UAP56/SUB2
11 Sobic.004G206100 transmembrane protein 17, putative, expressed K16833: PPP1R2, protein phosphatase inhibitor 2
12 Sobic.004G097200 Mpv17 / PMP22 family domain containing protein, expressed K13347: PXMP2, peroxisomal membrane protein 2
13 Sobic.005G062700 nifU, putative, expressed -
14 Sobic.001G309900 transporter, major facilitator family, putative, expressed -
15 Sobic.003G339700 Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.12 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
16 Sobic.009G246300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CGMC_MAPKCMGC_2.4 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K04371: ERK, mitogen-activated protein kinase 1/3
17 Sobic.001G292000 haloacid dehalogenase-like hydrolase family protein, putative, expressed -
18 Sobic.010G251300 OsSBeL1 - Putative Serine Beta-Lactamase homologue, expressed K08869: ADCK, aarF domain-containing kinase
19 Sobic.003G428600 amidohydrolase, putative, expressed K07047: N-substituted formamide deformylase
20 Sobic.001G104900 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@peptidase, M50 family, putative, expressed -


Gene co-expression network
sample Sobic003G233200 Sobic003G233200 Sobic004G279100 Sobic004G279100 Sobic003G233200--Sobic004G279100 Sobic008G187100 Sobic008G187100 Sobic003G233200--Sobic008G187100 Sobic002G148100 Sobic002G148100 Sobic003G233200--Sobic002G148100 Sobic003G373600 Sobic003G373600 Sobic003G233200--Sobic003G373600 Sobic002G420900 Sobic002G420900 Sobic003G233200--Sobic002G420900 Sobic002G295100 Sobic002G295100 Sobic003G233200--Sobic002G295100 Sobic004G113100 Sobic004G113100 Sobic003G233200--Sobic004G113100 Sobic002G279700 Sobic002G279700 Sobic003G233200--Sobic002G279700 Sobic007G079400 Sobic007G079400 Sobic003G233200--Sobic007G079400 Sobic003G113800 Sobic003G113800 Sobic004G279100--Sobic003G113800 Sobic006G156300 Sobic006G156300 Sobic004G279100--Sobic006G156300 Sobic002G134600 Sobic002G134600 Sobic004G279100--Sobic002G134600 Sobic002G235300 Sobic002G235300 Sobic004G279100--Sobic002G235300 Sobic010G009800 Sobic010G009800 Sobic004G279100--Sobic010G009800 Sobic003G316700 Sobic003G316700 Sobic004G279100--Sobic003G316700 Sobic007G165900 Sobic007G165900 Sobic004G279100--Sobic007G165900 Sobic005G036800 Sobic005G036800 Sobic004G279100--Sobic005G036800 Sobic002G257200 Sobic002G257200 Sobic004G279100--Sobic002G257200 Sobic003G381700 Sobic003G381700 Sobic008G187100--Sobic003G381700 Sobic003G186900 Sobic003G186900 Sobic008G187100--Sobic003G186900 Sobic003G339700 Sobic003G339700 Sobic008G187100--Sobic003G339700 Sobic005G106600 Sobic005G106600 Sobic008G187100--Sobic005G106600 Sobic001G057700 Sobic001G057700 Sobic008G187100--Sobic001G057700 Sobic001G352400 Sobic001G352400 Sobic008G187100--Sobic001G352400 Sobic003G166200 Sobic003G166200 Sobic008G187100--Sobic003G166200 Sobic004G322700 Sobic004G322700 Sobic008G187100--Sobic004G322700 Sobic007G146400 Sobic007G146400 Sobic008G187100--Sobic007G146400 Sobic006G280500 Sobic006G280500 Sobic002G148100--Sobic006G280500 Sobic010G188600 Sobic010G188600 Sobic002G148100--Sobic010G188600 Sobic002G148100--Sobic003G186900 Sobic007G089500 Sobic007G089500 Sobic002G148100--Sobic007G089500 Sobic001G193300 Sobic001G193300 Sobic002G148100--Sobic001G193300 Sobic003G253600 Sobic003G253600 Sobic002G148100--Sobic003G253600 Sobic002G148100--Sobic008G187100 Sobic002G383800 Sobic002G383800 Sobic002G148100--Sobic002G383800 Sobic002G148100--Sobic003G113800 Sobic003G157900 Sobic003G157900 Sobic003G373600--Sobic003G157900 Sobic005G062700 Sobic005G062700 Sobic003G373600--Sobic005G062700 Sobic003G425300 Sobic003G425300 Sobic003G373600--Sobic003G425300 Sobic003G373600--Sobic003G381700 Sobic005G172400 Sobic005G172400 Sobic003G373600--Sobic005G172400 Sobic001G276300 Sobic001G276300 Sobic003G373600--Sobic001G276300 Sobic003G373600--Sobic007G079400 Sobic008G077500 Sobic008G077500 Sobic003G373600--Sobic008G077500 Sobic003G373600--Sobic008G187100 Sobic006G066800 Sobic006G066800 Sobic002G420900--Sobic006G066800 Sobic002G159100 Sobic002G159100 Sobic002G420900--Sobic002G159100 Sobic002G420900--Sobic002G279700 Sobic002G420900--Sobic001G276300 Sobic006G261700 Sobic006G261700 Sobic002G420900--Sobic006G261700 Sobic001G020100 Sobic001G020100 Sobic002G420900--Sobic001G020100 Sobic004G269800 Sobic004G269800 Sobic002G420900--Sobic004G269800 Sobic010G047700 Sobic010G047700 Sobic002G420900--Sobic010G047700 Sobic004G206100 Sobic004G206100 Sobic002G420900--Sobic004G206100 Sobic004G323400 Sobic004G323400 Sobic002G295100--Sobic004G323400 Sobic001G331600 Sobic001G331600 Sobic002G295100--Sobic001G331600 Sobic001G485100 Sobic001G485100 Sobic002G295100--Sobic001G485100 Sobic002G293500 Sobic002G293500 Sobic002G295100--Sobic002G293500 Sobic004G312600 Sobic004G312600 Sobic002G295100--Sobic004G312600 Sobic001G046000 Sobic001G046000 Sobic002G295100--Sobic001G046000 Sobic009G225600 Sobic009G225600 Sobic002G295100--Sobic009G225600 Sobic006G257800 Sobic006G257800 Sobic002G295100--Sobic006G257800 Sobic003G162400 Sobic003G162400 Sobic002G295100--Sobic003G162400 Sobic003G103300 Sobic003G103300 Sobic004G113100--Sobic003G103300 Sobic004G125800 Sobic004G125800 Sobic004G113100--Sobic004G125800 Sobic001G015200 Sobic001G015200 Sobic004G113100--Sobic001G015200 Sobic007G046950 Sobic007G046950 Sobic004G113100--Sobic007G046950 Sobic010G101000 Sobic010G101000 Sobic004G113100--Sobic010G101000 Sobic004G113100--Sobic009G225600 Sobic004G113100--Sobic005G062700 Sobic002G030900 Sobic002G030900 Sobic004G113100--Sobic002G030900 Sobic001G104700 Sobic001G104700 Sobic004G113100--Sobic001G104700 Sobic002G128900 Sobic002G128900 Sobic002G279700--Sobic002G128900 Sobic002G279700--Sobic006G261700 Sobic001G295300 Sobic001G295300 Sobic002G279700--Sobic001G295300 Sobic002G200900 Sobic002G200900 Sobic002G279700--Sobic002G200900 Sobic002G233700 Sobic002G233700 Sobic002G279700--Sobic002G233700 Sobic008G188600 Sobic008G188600 Sobic002G279700--Sobic008G188600 Sobic002G279700--Sobic001G020100 Sobic008G006200 Sobic008G006200 Sobic002G279700--Sobic008G006200 Sobic004G307400 Sobic004G307400 Sobic002G279700--Sobic004G307400 Sobic007G108400 Sobic007G108400 Sobic007G079400--Sobic007G108400 Sobic003G105900 Sobic003G105900 Sobic007G079400--Sobic003G105900 Sobic007G079400--Sobic001G057700 Sobic003G264800 Sobic003G264800 Sobic007G079400--Sobic003G264800 Sobic002G401000 Sobic002G401000 Sobic007G079400--Sobic002G401000 Sobic007G079400--Sobic003G373600 Sobic002G393700 Sobic002G393700 Sobic007G079400--Sobic002G393700 Sobic007G079400--Sobic005G062700 Sobic004G344000 Sobic004G344000 Sobic007G079400--Sobic004G344000
Octagon: transcription factors


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