Gene annotation
Transcriptome id Sobic.002G148100.2,Sobic.002G148100.1
Synonym Sb02g016600
Functional annotation CRAL/TRIO domain containing protein, expressed
UniProt A0A1B6QBD4 , C5X7H6
Pfam PF03765 PF00650
Panther DB PTHR23324 PTHR23324:SF80
NCBI CDD KOG1471; Phosphatidylinositol transfer protein SEC14 and related proteins
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G55840 : Sec14p-like phosphatidylinositol transfer family protein
RAP-DB (Rice) LOC_Os09g08390.1 : CRAL/TRIO domain containing protein, expressed
MaizeGDB (Corn) Zm00025a013259
Brachypodium KQJ86952 , KQJ86953 , PNT62818
Barley HORVU5Hr1G052230.4 , HORVU5Hr1G052230.3 , HORVU5Hr1G052230.2 , HORVU5Hr1G052230.1
Wheat TraesCS5B02G166800 , TraesCS5A02G170000
Populus -


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cDNA sequences
Sobic.002G148100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G280500 phosphate/phosphate translocator, putative, expressed -
2 Sobic.010G188600 stromal membrane-associated protein, putative, expressed K12486: stromal membrane-associated protein
3 Sobic.003G186900 - K12812: DDX39B, UAP56, ATP-dependent RNA helicase UAP56/SUB2
4 Sobic.007G089500 syntaxin 6, N-terminal domain containing protein, expressed -
5 Sobic.001G193300 TBC domain containing protein, expressed -
6 Sobic.003G253600 protein kinase domain containing protein, expressed -
7 Sobic.008G187100 early-responsive to dehydration protein-related, putative, expressed -
8 Sobic.002G383800 GTP-binding protein, putative, expressed K06944: uncharacterized protein
9 Sobic.003G113800 CGMC_GSK.1 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K03083: glycogen synthase kinase 3 beta
K00924: kinase
10 Sobic.007G079400 cytidylyltransferase domain containing protein, expressed K00967: ethanolamine-phosphate cytidylyltransferase
11 Sobic.003G176000 lipase family protein, putative, expressed -
12 Sobic.008G088806 - K16280: E3 ubiquitin-protein ligase RGLG
13 Sobic.008G053300 CAMK_CAMK_like.45 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
14 Sobic.002G393700 expressed protein -
15 Sobic.010G183300 - -
16 Sobic.003G354600 csAtPR5, putative, expressed -
17 Sobic.003G021100 expressed protein -
18 Sobic.003G119600 zinc finger, C3HC4 type domain containing protein, expressed -
19 Sobic.001G303100 expressed protein -
20 Sobic.004G255700 sucrase-related, putative, expressed -


Gene co-expression network
sample Sobic002G148100 Sobic002G148100 Sobic006G280500 Sobic006G280500 Sobic002G148100--Sobic006G280500 Sobic010G188600 Sobic010G188600 Sobic002G148100--Sobic010G188600 Sobic003G186900 Sobic003G186900 Sobic002G148100--Sobic003G186900 Sobic007G089500 Sobic007G089500 Sobic002G148100--Sobic007G089500 Sobic001G193300 Sobic001G193300 Sobic002G148100--Sobic001G193300 Sobic003G253600 Sobic003G253600 Sobic002G148100--Sobic003G253600 Sobic008G187100 Sobic008G187100 Sobic002G148100--Sobic008G187100 Sobic002G383800 Sobic002G383800 Sobic002G148100--Sobic002G383800 Sobic003G113800 Sobic003G113800 Sobic002G148100--Sobic003G113800 Sobic006G280500--Sobic002G148100 Sobic006G280500--Sobic003G113800 Sobic001G244700 Sobic001G244700 Sobic006G280500--Sobic001G244700 Sobic004G210500 Sobic004G210500 Sobic006G280500--Sobic004G210500 Sobic001G425150 Sobic001G425150 Sobic006G280500--Sobic001G425150 Sobic004G070700 Sobic004G070700 Sobic006G280500--Sobic004G070700 Sobic006G280500--Sobic001G193300 Sobic003G293300 Sobic003G293300 Sobic006G280500--Sobic003G293300 Sobic003G350800 Sobic003G350800 Sobic006G280500--Sobic003G350800 Sobic009G063100 Sobic009G063100 Sobic010G188600--Sobic009G063100 Sobic007G029700 Sobic007G029700 Sobic010G188600--Sobic007G029700 Sobic002G193800 Sobic002G193800 Sobic010G188600--Sobic002G193800 Sobic004G193700 Sobic004G193700 Sobic010G188600--Sobic004G193700 Sobic002G091600 Sobic002G091600 Sobic010G188600--Sobic002G091600 Sobic006G092000 Sobic006G092000 Sobic010G188600--Sobic006G092000 Sobic005G149400 Sobic005G149400 Sobic010G188600--Sobic005G149400 Sobic008G115900 Sobic008G115900 Sobic010G188600--Sobic008G115900 Sobic001G168250 Sobic001G168250 Sobic010G188600--Sobic001G168250 Sobic003G166200 Sobic003G166200 Sobic003G186900--Sobic003G166200 Sobic003G264800 Sobic003G264800 Sobic003G186900--Sobic003G264800 Sobic005G106600 Sobic005G106600 Sobic003G186900--Sobic005G106600 Sobic006G219600 Sobic006G219600 Sobic003G186900--Sobic006G219600 Sobic002G072400 Sobic002G072400 Sobic003G186900--Sobic002G072400 Sobic004G337400 Sobic004G337400 Sobic003G186900--Sobic004G337400 Sobic010G171600 Sobic010G171600 Sobic003G186900--Sobic010G171600 Sobic001G333800 Sobic001G333800 Sobic003G186900--Sobic001G333800 Sobic001G207800 Sobic001G207800 Sobic003G186900--Sobic001G207800 Sobic007G089500--Sobic010G188600 Sobic006G261700 Sobic006G261700 Sobic007G089500--Sobic006G261700 Sobic005G073200 Sobic005G073200 Sobic007G089500--Sobic005G073200 Sobic007G089500--Sobic009G063100 Sobic007G089500--Sobic002G148100 Sobic001G514800 Sobic001G514800 Sobic007G089500--Sobic001G514800 Sobic001G085600 Sobic001G085600 Sobic007G089500--Sobic001G085600 Sobic009G210200 Sobic009G210200 Sobic007G089500--Sobic009G210200 Sobic002G218500 Sobic002G218500 Sobic007G089500--Sobic002G218500 Sobic009G068500 Sobic009G068500 Sobic001G193300--Sobic009G068500 Sobic008G089100 Sobic008G089100 Sobic001G193300--Sobic008G089100 Sobic004G257100 Sobic004G257100 Sobic001G193300--Sobic004G257100 Sobic002G359400 Sobic002G359400 Sobic001G193300--Sobic002G359400 Sobic008G033500 Sobic008G033500 Sobic001G193300--Sobic008G033500 Sobic004G202500 Sobic004G202500 Sobic001G193300--Sobic004G202500 Sobic003G176000 Sobic003G176000 Sobic001G193300--Sobic003G176000 Sobic001G007000 Sobic001G007000 Sobic001G193300--Sobic001G007000 Sobic008G124900 Sobic008G124900 Sobic001G193300--Sobic008G124900 Sobic006G185100 Sobic006G185100 Sobic003G253600--Sobic006G185100 Sobic002G257750 Sobic002G257750 Sobic003G253600--Sobic002G257750 Sobic003G119600 Sobic003G119600 Sobic003G253600--Sobic003G119600 Sobic002G344000 Sobic002G344000 Sobic003G253600--Sobic002G344000 Sobic001G332500 Sobic001G332500 Sobic003G253600--Sobic001G332500 Sobic003G316500 Sobic003G316500 Sobic003G253600--Sobic003G316500 Sobic003G155100 Sobic003G155100 Sobic003G253600--Sobic003G155100 Sobic005G059800 Sobic005G059800 Sobic003G253600--Sobic005G059800 Sobic008G044100 Sobic008G044100 Sobic003G253600--Sobic008G044100 Sobic003G381700 Sobic003G381700 Sobic008G187100--Sobic003G381700 Sobic008G187100--Sobic003G186900 Sobic003G339700 Sobic003G339700 Sobic008G187100--Sobic003G339700 Sobic008G187100--Sobic005G106600 Sobic001G057700 Sobic001G057700 Sobic008G187100--Sobic001G057700 Sobic001G352400 Sobic001G352400 Sobic008G187100--Sobic001G352400 Sobic008G187100--Sobic003G166200 Sobic004G322700 Sobic004G322700 Sobic008G187100--Sobic004G322700 Sobic007G146400 Sobic007G146400 Sobic008G187100--Sobic007G146400 Sobic008G070800 Sobic008G070800 Sobic002G383800--Sobic008G070800 Sobic003G221400 Sobic003G221400 Sobic002G383800--Sobic003G221400 Sobic001G355800 Sobic001G355800 Sobic002G383800--Sobic001G355800 Sobic001G333100 Sobic001G333100 Sobic002G383800--Sobic001G333100 Sobic002G131200 Sobic002G131200 Sobic002G383800--Sobic002G131200 Sobic008G054000 Sobic008G054000 Sobic002G383800--Sobic008G054000 Sobic003G311900 Sobic003G311900 Sobic002G383800--Sobic003G311900 Sobic002G311100 Sobic002G311100 Sobic002G383800--Sobic002G311100 Sobic004G131800 Sobic004G131800 Sobic002G383800--Sobic004G131800 Sobic003G113800--Sobic006G280500 Sobic003G113800--Sobic003G293300 Sobic004G279100 Sobic004G279100 Sobic003G113800--Sobic004G279100 Sobic001G234200 Sobic001G234200 Sobic003G113800--Sobic001G234200 Sobic002G071000 Sobic002G071000 Sobic003G113800--Sobic002G071000 Sobic006G049700 Sobic006G049700 Sobic003G113800--Sobic006G049700 Sobic002G235300 Sobic002G235300 Sobic003G113800--Sobic002G235300 Sobic001G459100 Sobic001G459100 Sobic003G113800--Sobic001G459100 Sobic002G083900 Sobic002G083900 Sobic003G113800--Sobic002G083900
Octagon: transcription factors


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