Gene annotation
Transcriptome id Sobic.001G142800.2,Sobic.001G142800.3
Synonym ZIP7, Sb01g012430
Functional annotation metal cation transporter, putative, expressed
UniProt C5WQB1
Pfam PF02535
Panther DB PTHR11040 PTHR11040:SF41
NCBI CDD KOG1558; Fe2+/Zn2+ regulated transporter
KEGG Orthology K14709; SLC39A1_2_3, solute carrier family 39 (zinc transporter), member 1/2/3
Gene Ontology GO:0016020; membrane


Orthologs (automatic annotation)
TAIR AT1G31260 : zinc transporter 10 precursor
RAP-DB (Rice) LOC_Os03g46470.1 : metal cation transporter, putative, expressed
MaizeGDB (Corn) Zm00025a009177 , Zm00025a007526
Brachypodium KQK13846
Barley HORVU4Hr1G009330.1 , HORVU4Hr1G003050.1 , HORVU4Hr1G003050.3 , HORVU4Hr1G003050.4 , HORVU6Hr1G073380.1 , HORVU5Hr1G122110.1 , HORVU4Hr1G003050.2 , HORVU4Hr1G003050.5
Wheat TraesCS7D02G098100 , TraesCS4A02G294200 , TraesCS4D02G017600 , TraesCS4A02G294300 , TraesCS4A02G403300 , TraesCS4B02G019300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G041200 similar to LOC Os02g20360: tyrosine aminotransferase(PubMedID : 24655390)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@similar to LOC.Os02g20360:tyrosine aminotranferase(PubMedID : 24655390)@tyrosine aminotransferase, putative, expressed K00815: tyrosine aminotransferase
2 Sobic.004G238100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aquaporin protein, putative, expressed K09874: aquaporin NIP
3 Sobic.009G003000 methionine S-methyltransferase, putative, expressed K08247: methionine S-methyltransferase
4 Sobic.002G041100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@tyrosine aminotransferase, putative, expressed K00815: tyrosine aminotransferase
5 Sobic.006G259700 methylthioribose kinase, putative, expressed K00899: 5-methylthioribose kinase
6 Sobic.003G134600 expressed protein -
7 Sobic.009G176800 DUF567 domain containing protein, putative, expressed -
8 Sobic.006G024600 transmembrane amino acid transporter protein, putative, expressed K15015: SLC32A, solute carrier family 32 (vesicular inhibitory amino acid transporter)
9 Sobic.010G225701 - -
10 Sobic.004G130600 Cellular calcium signals(PubMedID : 19860013)@calcineurin B, putative, expressed K06268: PPP3R, serine/threonine-protein phosphatase 2B regulatory subunit
11 Sobic.001G353200 ctr copper transporter family protein, putative, expressed K14686: SLC31A1, solute carrier family 31 (copper transporter), member 1
12 Sobic.003G014400 expressed protein -
13 Sobic.007G021100 carrier, putative, expressed -
14 Sobic.001G185800 MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
15 Sobic.005G050300 leucine-rich repeat receptor-like protein kinase 1, putative, expressed -
16 Sobic.008G150100 resistance protein, putative, expressed -
17 Sobic.002G230700 - -
18 Sobic.006G117600 Os4bglu12 - beta-glucosidase, exo-beta-glucanase, expressed K01188: beta-glucosidase
19 Sobic.006G271500 phosphomannomutase, putative, expressed K17497: phosphomannomutase
20 Sobic.003G012400 flavin monooxygenase, putative, expressed -


Gene co-expression network
sample Sobic001G142800 Sobic001G142800 Sobic002G041200 Sobic002G041200 Sobic001G142800--Sobic002G041200 Sobic004G238100 Sobic004G238100 Sobic001G142800--Sobic004G238100 Sobic009G003000 Sobic009G003000 Sobic001G142800--Sobic009G003000 Sobic002G041100 Sobic002G041100 Sobic001G142800--Sobic002G041100 Sobic006G259700 Sobic006G259700 Sobic001G142800--Sobic006G259700 Sobic003G134600 Sobic003G134600 Sobic001G142800--Sobic003G134600 Sobic009G176800 Sobic009G176800 Sobic001G142800--Sobic009G176800 Sobic006G024600 Sobic006G024600 Sobic001G142800--Sobic006G024600 Sobic010G225701 Sobic010G225701 Sobic001G142800--Sobic010G225701 Sobic002G041200--Sobic009G003000 Sobic002G041200--Sobic001G142800 Sobic002G041200--Sobic006G259700 Sobic002G041200--Sobic002G041100 Sobic007G021100 Sobic007G021100 Sobic002G041200--Sobic007G021100 Sobic005G110541 Sobic005G110541 Sobic002G041200--Sobic005G110541 Sobic002G041200--Sobic004G238100 Sobic005G100800 Sobic005G100800 Sobic002G041200--Sobic005G100800 Sobic001G353200 Sobic001G353200 Sobic002G041200--Sobic001G353200 Sobic004G238100--Sobic001G142800 Sobic005G091300 Sobic005G091300 Sobic004G238100--Sobic005G091300 Sobic004G238100--Sobic009G003000 Sobic006G271500 Sobic006G271500 Sobic004G238100--Sobic006G271500 Sobic008G119800 Sobic008G119800 Sobic004G238100--Sobic008G119800 Sobic009G246300 Sobic009G246300 Sobic004G238100--Sobic009G246300 Sobic004G238100--Sobic006G259700 Sobic004G113100 Sobic004G113100 Sobic004G238100--Sobic004G113100 Sobic004G238100--Sobic009G176800 Sobic009G003000--Sobic002G041200 Sobic009G003000--Sobic001G142800 Sobic009G003000--Sobic006G259700 Sobic009G003000--Sobic004G238100 Sobic009G003000--Sobic010G225701 Sobic009G003000--Sobic006G271500 Sobic009G003000--Sobic006G024600 Sobic009G003000--Sobic009G246300 Sobic001G261545 Sobic001G261545 Sobic009G003000--Sobic001G261545 Sobic001G443100 Sobic001G443100 Sobic002G041100--Sobic001G443100 Sobic006G230100 Sobic006G230100 Sobic002G041100--Sobic006G230100 Sobic002G082000 Sobic002G082000 Sobic002G041100--Sobic002G082000 Sobic001G395900 Sobic001G395900 Sobic002G041100--Sobic001G395900 Sobic004G299500 Sobic004G299500 Sobic002G041100--Sobic004G299500 Sobic005G097900 Sobic005G097900 Sobic002G041100--Sobic005G097900 Sobic007G193200 Sobic007G193200 Sobic002G041100--Sobic007G193200 Sobic007G015000 Sobic007G015000 Sobic002G041100--Sobic007G015000 Sobic002G041100--Sobic001G353200 Sobic006G259700--Sobic002G041200 Sobic006G259700--Sobic009G003000 Sobic008G150100 Sobic008G150100 Sobic006G259700--Sobic008G150100 Sobic006G259700--Sobic001G142800 Sobic006G259700--Sobic006G271500 Sobic009G139900 Sobic009G139900 Sobic006G259700--Sobic009G139900 Sobic001G243100 Sobic001G243100 Sobic006G259700--Sobic001G243100 Sobic010G115500 Sobic010G115500 Sobic006G259700--Sobic010G115500 Sobic001G203400 Sobic001G203400 Sobic006G259700--Sobic001G203400 Sobic006G117600 Sobic006G117600 Sobic003G134600--Sobic006G117600 Sobic010G115000 Sobic010G115000 Sobic003G134600--Sobic010G115000 Sobic007G094100 Sobic007G094100 Sobic003G134600--Sobic007G094100 Sobic005G216500 Sobic005G216500 Sobic003G134600--Sobic005G216500 Sobic004G008600 Sobic004G008600 Sobic003G134600--Sobic004G008600 Sobic010G269000 Sobic010G269000 Sobic003G134600--Sobic010G269000 Sobic003G046700 Sobic003G046700 Sobic003G134600--Sobic003G046700 Sobic005G079100 Sobic005G079100 Sobic003G134600--Sobic005G079100 Sobic004G009300 Sobic004G009300 Sobic003G134600--Sobic004G009300 Sobic004G059600 Sobic004G059600 Sobic009G176800--Sobic004G059600 Sobic009G176800--Sobic003G134600 Sobic005G115600 Sobic005G115600 Sobic009G176800--Sobic005G115600 Sobic004G323900 Sobic004G323900 Sobic009G176800--Sobic004G323900 Sobic004G106300 Sobic004G106300 Sobic009G176800--Sobic004G106300 Sobic009G176800--Sobic006G271500 Sobic009G176800--Sobic004G238100 Sobic009G176800--Sobic009G003000 Sobic009G176800--Sobic001G142800 Sobic006G024600--Sobic010G225701 Sobic007G006200 Sobic007G006200 Sobic006G024600--Sobic007G006200 Sobic005G211600 Sobic005G211600 Sobic006G024600--Sobic005G211600 Sobic001G200000 Sobic001G200000 Sobic006G024600--Sobic001G200000 Sobic004G092350 Sobic004G092350 Sobic006G024600--Sobic004G092350 Sobic002G161400 Sobic002G161400 Sobic006G024600--Sobic002G161400 Sobic010G230500 Sobic010G230500 Sobic006G024600--Sobic010G230500 Sobic003G012400 Sobic003G012400 Sobic006G024600--Sobic003G012400 Sobic003G080300 Sobic003G080300 Sobic006G024600--Sobic003G080300 Sobic010G225701--Sobic007G006200 Sobic002G162400 Sobic002G162400 Sobic010G225701--Sobic002G162400 Sobic009G194500 Sobic009G194500 Sobic010G225701--Sobic009G194500 Sobic001G244600 Sobic001G244600 Sobic010G225701--Sobic001G244600 Sobic001G243200 Sobic001G243200 Sobic010G225701--Sobic001G243200 Sobic001G077300 Sobic001G077300 Sobic010G225701--Sobic001G077300 Sobic001G263100 Sobic001G263100 Sobic010G225701--Sobic001G263100 Sobic006G235300 Sobic006G235300 Sobic010G225701--Sobic006G235300 Sobic008G038500 Sobic008G038500 Sobic010G225701--Sobic008G038500
Octagon: transcription factors


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