Gene annotation
Transcriptome id Sobic.002G230700.1
Synonym
Functional annotation -
UniProt A0A1B6QD04
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G161500 elongation factor, putative, expressed K02355: fusA, GFM, elongation factor G
2 Sobic.006G235400 ELMO/CED-12 family protein, putative, expressed K08869: ADCK, aarF domain-containing kinase
3 Sobic.003G409700 rieske domain containing protein, expressed -
4 Sobic.004G128900 GTP-binding protein typA/bipA, putative, expressed K06207: typA, GTP-binding protein
5 Sobic.008G129900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
6 Sobic.003G380200 SNARE associated Golgi protein, putative, expressed -
7 Sobic.010G231300 glutamate receptor, putative, expressed K05387: glutamate receptor, ionotropic, plant
8 Sobic.001G244600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@KIP1, putative, expressed -
9 Sobic.002G161400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DNA-binding protein, putative, expressed -
10 Sobic.001G217900 PPR repeat domain containing protein, putative, expressed -
11 Sobic.009G259100 CCT motif family protein, expressed -
12 Sobic.010G138800 phosphate transporter 1, putative, expressed -
13 Sobic.010G100900 alanyl-tRNA synthetase, putative, expressed K01872: AARS, alanyl-tRNA synthetase
14 Sobic.002G402700 -(PubMedID : 26976818)@ferredoxin-dependent glutamate synthase, chloroplast precursor, putative, expressed K00284: GLU, glutamate synthase (ferredoxin)
15 Sobic.001G029600 -(PubMedID : 26465154)@expressed protein -
16 Sobic.003G341300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
17 Sobic.006G191500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@PPR repeat domain containing protein, putative, expressed -
18 Sobic.003G340300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@nodulin, putative, expressed -
19 Sobic.002G206300 tsi1-interacting protein TSIP1, putative, expressed -
20 Sobic.007G006200 NBS-LRR disease resistance protein, putative, expressed -


Gene co-expression network
sample Sobic002G230700 Sobic002G230700 Sobic006G161500 Sobic006G161500 Sobic002G230700--Sobic006G161500 Sobic006G235400 Sobic006G235400 Sobic002G230700--Sobic006G235400 Sobic003G409700 Sobic003G409700 Sobic002G230700--Sobic003G409700 Sobic004G128900 Sobic004G128900 Sobic002G230700--Sobic004G128900 Sobic008G129900 Sobic008G129900 Sobic002G230700--Sobic008G129900 Sobic003G380200 Sobic003G380200 Sobic002G230700--Sobic003G380200 Sobic010G231300 Sobic010G231300 Sobic002G230700--Sobic010G231300 Sobic001G244600 Sobic001G244600 Sobic002G230700--Sobic001G244600 Sobic002G161400 Sobic002G161400 Sobic002G230700--Sobic002G161400 Sobic006G161500--Sobic004G128900 Sobic006G161500--Sobic010G231300 Sobic006G161500--Sobic003G409700 Sobic006G161500--Sobic006G235400 Sobic004G322600 Sobic004G322600 Sobic006G161500--Sobic004G322600 Sobic004G035100 Sobic004G035100 Sobic006G161500--Sobic004G035100 Sobic001G073300 Sobic001G073300 Sobic006G161500--Sobic001G073300 Sobic002G119100 Sobic002G119100 Sobic006G161500--Sobic002G119100 Sobic009G194500 Sobic009G194500 Sobic006G161500--Sobic009G194500 Sobic006G235400--Sobic010G231300 Sobic001G077300 Sobic001G077300 Sobic006G235400--Sobic001G077300 Sobic006G235400--Sobic004G128900 Sobic003G341300 Sobic003G341300 Sobic006G235400--Sobic003G341300 Sobic006G235400--Sobic003G409700 Sobic006G235400--Sobic008G129900 Sobic006G235400--Sobic006G161500 Sobic006G235400--Sobic003G380200 Sobic001G180200 Sobic001G180200 Sobic006G235400--Sobic001G180200 Sobic003G409700--Sobic003G341300 Sobic009G133700 Sobic009G133700 Sobic003G409700--Sobic009G133700 Sobic007G135800 Sobic007G135800 Sobic003G409700--Sobic007G135800 Sobic003G409700--Sobic006G235400 Sobic003G409700--Sobic006G161500 Sobic003G409700--Sobic003G380200 Sobic003G409700--Sobic004G128900 Sobic007G157300 Sobic007G157300 Sobic003G409700--Sobic007G157300 Sobic003G228300 Sobic003G228300 Sobic003G409700--Sobic003G228300 Sobic004G128900--Sobic002G161400 Sobic004G153900 Sobic004G153900 Sobic004G128900--Sobic004G153900 Sobic006G191500 Sobic006G191500 Sobic004G128900--Sobic006G191500 Sobic004G128900--Sobic006G235400 Sobic004G128900--Sobic006G161500 Sobic004G344600 Sobic004G344600 Sobic004G128900--Sobic004G344600 Sobic004G128900--Sobic003G380200 Sobic001G331600 Sobic001G331600 Sobic004G128900--Sobic001G331600 Sobic001G485100 Sobic001G485100 Sobic004G128900--Sobic001G485100 Sobic008G129900--Sobic010G231300 Sobic008G033000 Sobic008G033000 Sobic008G129900--Sobic008G033000 Sobic001G258200 Sobic001G258200 Sobic008G129900--Sobic001G258200 Sobic001G217900 Sobic001G217900 Sobic008G129900--Sobic001G217900 Sobic008G129900--Sobic006G235400 Sobic003G097600 Sobic003G097600 Sobic008G129900--Sobic003G097600 Sobic001G263100 Sobic001G263100 Sobic008G129900--Sobic001G263100 Sobic002G206300 Sobic002G206300 Sobic008G129900--Sobic002G206300 Sobic008G129900--Sobic003G341300 Sobic003G380200--Sobic006G191500 Sobic003G186800 Sobic003G186800 Sobic003G380200--Sobic003G186800 Sobic010G100900 Sobic010G100900 Sobic003G380200--Sobic010G100900 Sobic003G304300 Sobic003G304300 Sobic003G380200--Sobic003G304300 Sobic004G267700 Sobic004G267700 Sobic003G380200--Sobic004G267700 Sobic003G380200--Sobic001G485100 Sobic007G087100 Sobic007G087100 Sobic003G380200--Sobic007G087100 Sobic003G380200--Sobic002G161400 Sobic004G268400 Sobic004G268400 Sobic003G380200--Sobic004G268400 Sobic010G231300--Sobic008G129900 Sobic010G231300--Sobic006G235400 Sobic010G231300--Sobic001G217900 Sobic010G231300--Sobic001G263100 Sobic010G231300--Sobic006G161500 Sobic007G133000 Sobic007G133000 Sobic010G231300--Sobic007G133000 Sobic010G231300--Sobic003G341300 Sobic010G231300--Sobic001G180200 Sobic002G162400 Sobic002G162400 Sobic010G231300--Sobic002G162400 Sobic001G244600--Sobic008G129900 Sobic010G104800 Sobic010G104800 Sobic001G244600--Sobic010G104800 Sobic001G244600--Sobic006G161500 Sobic009G256100 Sobic009G256100 Sobic001G244600--Sobic009G256100 Sobic001G244600--Sobic001G073300 Sobic007G058100 Sobic007G058100 Sobic001G244600--Sobic007G058100 Sobic001G244600--Sobic001G217900 Sobic008G038500 Sobic008G038500 Sobic001G244600--Sobic008G038500 Sobic001G244600--Sobic010G231300 Sobic002G161400--Sobic006G191500 Sobic002G161400--Sobic004G344600 Sobic002G161400--Sobic004G128900 Sobic002G161400--Sobic003G304300 Sobic002G161400--Sobic001G485100 Sobic002G161400--Sobic004G153900 Sobic003G339200 Sobic003G339200 Sobic002G161400--Sobic003G339200 Sobic002G161400--Sobic003G380200 Sobic001G112900 Sobic001G112900 Sobic002G161400--Sobic001G112900
Octagon: transcription factors


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