Gene annotation
Transcriptome id Sobic.008G150100.2,Sobic.008G150100.3,Sobic.008G150100.1
Synonym
Functional annotation resistance protein, putative, expressed
UniProt A0A1Z5R7R8 , A0A1B6PEB0 , A0A1Z5R6X8
Pfam PF00931
Panther DB PTHR23155 PTHR23155:SF529
NCBI CDD KOG4658; Apoptotic ATPase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G58410 : Disease resistance protein (CC-NBS-LRR class) family
RAP-DB (Rice) LOC_Os08g42670.1,LOC_Os08g42670.2 : resistance protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium KQK08096 , KQK08097
Barley -
Wheat TraesCS4D02G360500 , TraesCS1B02G027500 , TraesCS1B02G027500 , TraesCS5D02G040200 , TraesCS1B02G027000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G259700 methylthioribose kinase, putative, expressed K00899: 5-methylthioribose kinase
2 Sobic.010G122000 serine threonine kinase, putative, expressed -
3 Sobic.003G192600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@receptor-like kinase ARK1AS, putative, expressed -
4 Sobic.001G438700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@heat shock protein DnaJ, putative, expressed -
5 Sobic.004G103400 verticillium wilt disease resistance protein, putative, expressed -
6 Sobic.008G133700 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
7 Sobic.001G353200 ctr copper transporter family protein, putative, expressed K14686: SLC31A1, solute carrier family 31 (copper transporter), member 1
8 Sobic.003G344200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@leaf senescence related protein, putative, expressed -
9 Sobic.004G153100 disease resistance protein, putative, expressed -
10 Sobic.002G120300 flavin monooxygenase, putative, expressed K11816: indole-3-pyruvate monooxygenase
11 Sobic.002G041100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@tyrosine aminotransferase, putative, expressed K00815: tyrosine aminotransferase
12 Sobic.006G016000 - -
13 Sobic.001G142800 metal cation transporter, putative, expressed K14709: SLC39A1_2_3, solute carrier family 39 (zinc transporter), member 1/2/3
14 Sobic.005G110541 - K16054: methylthioribulose 1-phosphate dehydratase / enolase-phosphatase E1
15 Sobic.002G041200 similar to LOC Os02g20360: tyrosine aminotransferase(PubMedID : 24655390)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@similar to LOC.Os02g20360:tyrosine aminotranferase(PubMedID : 24655390)@tyrosine aminotransferase, putative, expressed K00815: tyrosine aminotransferase
16 Sobic.009G033100 OsWAK4 - OsWAK receptor-like cytoplasmic kinase OsWAK-RLCK, expressed -
17 Sobic.010G123400 GRAM and C2 domains containing protein, putative, expressed -
18 Sobic.006G117600 Os4bglu12 - beta-glucosidase, exo-beta-glucanase, expressed K01188: beta-glucosidase
19 Sobic.001G203400 phosphatidylinositol-4-phosphate 5-kinase, putative, expressed K00889: 1-phosphatidylinositol-4-phosphate 5-kinase
20 Sobic.005G053700 - -


Gene co-expression network
sample Sobic008G150100 Sobic008G150100 Sobic006G259700 Sobic006G259700 Sobic008G150100--Sobic006G259700 Sobic010G122000 Sobic010G122000 Sobic008G150100--Sobic010G122000 Sobic003G192600 Sobic003G192600 Sobic008G150100--Sobic003G192600 Sobic001G438700 Sobic001G438700 Sobic008G150100--Sobic001G438700 Sobic004G103400 Sobic004G103400 Sobic008G150100--Sobic004G103400 Sobic008G133700 Sobic008G133700 Sobic008G150100--Sobic008G133700 Sobic001G353200 Sobic001G353200 Sobic008G150100--Sobic001G353200 Sobic003G344200 Sobic003G344200 Sobic008G150100--Sobic003G344200 Sobic004G153100 Sobic004G153100 Sobic008G150100--Sobic004G153100 Sobic002G041200 Sobic002G041200 Sobic006G259700--Sobic002G041200 Sobic009G003000 Sobic009G003000 Sobic006G259700--Sobic009G003000 Sobic006G259700--Sobic008G150100 Sobic001G142800 Sobic001G142800 Sobic006G259700--Sobic001G142800 Sobic006G271500 Sobic006G271500 Sobic006G259700--Sobic006G271500 Sobic009G139900 Sobic009G139900 Sobic006G259700--Sobic009G139900 Sobic001G243100 Sobic001G243100 Sobic006G259700--Sobic001G243100 Sobic010G115500 Sobic010G115500 Sobic006G259700--Sobic010G115500 Sobic001G203400 Sobic001G203400 Sobic006G259700--Sobic001G203400 Sobic001G454900 Sobic001G454900 Sobic010G122000--Sobic001G454900 Sobic010G122000--Sobic003G192600 Sobic007G193200 Sobic007G193200 Sobic010G122000--Sobic007G193200 Sobic005G075600 Sobic005G075600 Sobic010G122000--Sobic005G075600 Sobic010G122000--Sobic008G150100 Sobic001G326400 Sobic001G326400 Sobic010G122000--Sobic001G326400 Sobic010G122000--Sobic001G353200 Sobic003G020500 Sobic003G020500 Sobic010G122000--Sobic003G020500 Sobic005G110541 Sobic005G110541 Sobic010G122000--Sobic005G110541 Sobic004G323900 Sobic004G323900 Sobic003G192600--Sobic004G323900 Sobic003G017601 Sobic003G017601 Sobic003G192600--Sobic003G017601 Sobic003G192600--Sobic005G110541 Sobic005G071900 Sobic005G071900 Sobic003G192600--Sobic005G071900 Sobic003G192600--Sobic010G122000 Sobic005G110511 Sobic005G110511 Sobic003G192600--Sobic005G110511 Sobic003G192600--Sobic001G353200 Sobic004G161900 Sobic004G161900 Sobic003G192600--Sobic004G161900 Sobic003G079100 Sobic003G079100 Sobic003G192600--Sobic003G079100 Sobic005G133600 Sobic005G133600 Sobic001G438700--Sobic005G133600 Sobic010G225701 Sobic010G225701 Sobic001G438700--Sobic010G225701 Sobic005G224800 Sobic005G224800 Sobic001G438700--Sobic005G224800 Sobic002G017500 Sobic002G017500 Sobic001G438700--Sobic002G017500 Sobic001G438700--Sobic008G150100 Sobic001G413000 Sobic001G413000 Sobic001G438700--Sobic001G413000 Sobic002G321800 Sobic002G321800 Sobic001G438700--Sobic002G321800 Sobic001G223550 Sobic001G223550 Sobic001G438700--Sobic001G223550 Sobic006G195800 Sobic006G195800 Sobic001G438700--Sobic006G195800 Sobic004G103400--Sobic005G075600 Sobic005G092000 Sobic005G092000 Sobic004G103400--Sobic005G092000 Sobic006G075600 Sobic006G075600 Sobic004G103400--Sobic006G075600 Sobic007G221100 Sobic007G221100 Sobic004G103400--Sobic007G221100 Sobic006G191100 Sobic006G191100 Sobic004G103400--Sobic006G191100 Sobic007G119800 Sobic007G119800 Sobic004G103400--Sobic007G119800 Sobic004G103400--Sobic003G017601 Sobic001G260600 Sobic001G260600 Sobic004G103400--Sobic001G260600 Sobic004G103400--Sobic001G454900 Sobic004G113100 Sobic004G113100 Sobic008G133700--Sobic004G113100 Sobic005G127800 Sobic005G127800 Sobic008G133700--Sobic005G127800 Sobic008G089900 Sobic008G089900 Sobic008G133700--Sobic008G089900 Sobic003G242000 Sobic003G242000 Sobic008G133700--Sobic003G242000 Sobic008G133700--Sobic005G224800 Sobic002G262300 Sobic002G262300 Sobic008G133700--Sobic002G262300 Sobic006G051800 Sobic006G051800 Sobic008G133700--Sobic006G051800 Sobic010G272800 Sobic010G272800 Sobic008G133700--Sobic010G272800 Sobic003G301500 Sobic003G301500 Sobic008G133700--Sobic003G301500 Sobic001G353200--Sobic007G193200 Sobic001G243150 Sobic001G243150 Sobic001G353200--Sobic001G243150 Sobic005G046400 Sobic005G046400 Sobic001G353200--Sobic005G046400 Sobic009G065700 Sobic009G065700 Sobic001G353200--Sobic009G065700 Sobic002G111900 Sobic002G111900 Sobic001G353200--Sobic002G111900 Sobic010G191600 Sobic010G191600 Sobic001G353200--Sobic010G191600 Sobic009G225800 Sobic009G225800 Sobic001G353200--Sobic009G225800 Sobic003G441800 Sobic003G441800 Sobic001G353200--Sobic003G441800 Sobic002G289500 Sobic002G289500 Sobic001G353200--Sobic002G289500 Sobic009G142800 Sobic009G142800 Sobic003G344200--Sobic009G142800 Sobic003G344200--Sobic006G259700 Sobic009G016633 Sobic009G016633 Sobic003G344200--Sobic009G016633 Sobic010G123400 Sobic010G123400 Sobic003G344200--Sobic010G123400 Sobic003G344200--Sobic008G150100 Sobic003G344200--Sobic001G353200 Sobic003G344200--Sobic010G115500 Sobic003G344200--Sobic005G110541 Sobic003G344200--Sobic003G192600 Sobic004G153100--Sobic005G075600 Sobic003G106300 Sobic003G106300 Sobic004G153100--Sobic003G106300 Sobic004G153100--Sobic003G020500 Sobic007G120000 Sobic007G120000 Sobic004G153100--Sobic007G120000 Sobic007G021200 Sobic007G021200 Sobic004G153100--Sobic007G021200 Sobic005G069332 Sobic005G069332 Sobic004G153100--Sobic005G069332 Sobic004G261500 Sobic004G261500 Sobic004G153100--Sobic004G261500 Sobic004G299500 Sobic004G299500 Sobic004G153100--Sobic004G299500 Sobic004G153100--Sobic007G193200
Octagon: transcription factors


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