Gene annotation
Transcriptome id Sobic.003G344200.2,Sobic.003G344200.1
Synonym TBL29, ESK1, Sb03g038800
Functional annotation SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence. (PubMedID : 27586543)
leaf senescence related protein, putative, expressed
UniProt A0A1W0W077 , C5XNZ6
Pfam PF14416 PF13839
Panther DB PTHR32285 PTHR32285:SF70
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G55990 : Plant protein of unknown function (DUF828)
RAP-DB (Rice) LOC_Os01g61460.1 : leaf senescence related protein, putative, expressed
MaizeGDB (Corn) Zm00025a013220 , Zm00025a027000 , Zm00025a037141 , Zm00025a016450 , Zm00025a053657 , Zm00025a049266 , Zm00025a056956 , Zm00025a004540 , Zm00025a023286 , Zm00025a043430
Brachypodium KQK10416 , KQK14489 , KQJ92646 , KQK22160 , KQK06763
Barley HORVU3Hr1G087740.7 , HORVU3Hr1G087740.6 , HORVU3Hr1G087740.5 , HORVU3Hr1G087740.3 , HORVU3Hr1G087740.2 , HORVU3Hr1G087740.1 , HORVU2Hr1G014140.8 , HORVU2Hr1G014140.9 , HORVU2Hr1G014140.1 , HORVU2Hr1G014140.2 , HORVU2Hr1G014140.3 , HORVU2Hr1G014140.4 , HORVU2Hr1G014140.5 , HORVU2Hr1G014140.6 , HORVU2Hr1G014140.7 , HORVU2Hr1G014140.10 , HORVU2Hr1G014140.11 , HORVU5Hr1G048030.1 , HORVU1Hr1G059720.1 , HORVU1Hr1G059720.2 , HORVU1Hr1G059720.4 , HORVU1Hr1G059760.4 , HORVU1Hr1G059760.1 , HORVU1Hr1G059760.2 , HORVU1Hr1G059760.3 , HORVU1Hr1G059720.3
Wheat TraesCS3B02G382900 , TraesCS4B02G194100 , TraesCS5A02G473100 , TraesCS1B02G238600 , TraesCS1B02G238600 , TraesCS1B02G238600 , TraesCS1A02G225200 , TraesCS1A02G225200 , TraesCS1A02G225200 , TraesCS1D02G228100 , TraesCS2D02G246500 , TraesCS2A02G086900 , TraesCS3D02G344400 , TraesCS7A02G494100 , TraesCS4D02G152800 , TraesCS5A02G473100 , TraesCS1D02G226600 , TraesCS5B02G486000 , TraesCS5B02G486000 , TraesCS3A02G350400 , TraesCS2D02G084200 , TraesCS5D02G485800 , TraesCS4A02G110000 , TraesCS1B02G240700 , TraesCS1D02G226600 , TraesCS1D02G226600 , TraesCS2B02G101600 , TraesCS4D02G195000 , TraesCS1A02G226700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G142800 amino acid transporter, putative, expressed -
2 Sobic.006G259700 methylthioribose kinase, putative, expressed K00899: 5-methylthioribose kinase
3 Sobic.009G016633 - K09422: transcription factor MYB, plant
4 Sobic.010G123400 GRAM and C2 domains containing protein, putative, expressed -
5 Sobic.008G150100 resistance protein, putative, expressed -
6 Sobic.001G353200 ctr copper transporter family protein, putative, expressed K14686: SLC31A1, solute carrier family 31 (copper transporter), member 1
7 Sobic.010G115500 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed -
8 Sobic.005G110541 - K16054: methylthioribulose 1-phosphate dehydratase / enolase-phosphatase E1
9 Sobic.003G192600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@receptor-like kinase ARK1AS, putative, expressed -
10 Sobic.006G175900 acyl-CoA thioesterase 2, putative, expressed -
11 Sobic.002G041200 similar to LOC Os02g20360: tyrosine aminotransferase(PubMedID : 24655390)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@similar to LOC.Os02g20360:tyrosine aminotranferase(PubMedID : 24655390)@tyrosine aminotransferase, putative, expressed K00815: tyrosine aminotransferase
12 Sobic.005G053700 - -
13 Sobic.001G132800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CAMK_CAMK_like.21 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
14 Sobic.007G119800 ABC transporter, ATP-binding protein, putative, expressed -
15 Sobic.004G103400 verticillium wilt disease resistance protein, putative, expressed -
16 Sobic.003G362500 WD domain, G-beta repeat domain containing protein, expressed K10570: ERCC8, CKN1, DNA excision repair protein ERCC-8
17 Sobic.010G122000 serine threonine kinase, putative, expressed -
18 Sobic.007G021200 carrier, putative, expressed -
19 Sobic.002G120300 flavin monooxygenase, putative, expressed K11816: indole-3-pyruvate monooxygenase
20 Sobic.010G039300 cysteine synthase, putative, expressed K01738: cysteine synthase


Gene co-expression network
sample Sobic003G344200 Sobic003G344200 Sobic009G142800 Sobic009G142800 Sobic003G344200--Sobic009G142800 Sobic006G259700 Sobic006G259700 Sobic003G344200--Sobic006G259700 Sobic009G016633 Sobic009G016633 Sobic003G344200--Sobic009G016633 Sobic010G123400 Sobic010G123400 Sobic003G344200--Sobic010G123400 Sobic008G150100 Sobic008G150100 Sobic003G344200--Sobic008G150100 Sobic001G353200 Sobic001G353200 Sobic003G344200--Sobic001G353200 Sobic010G115500 Sobic010G115500 Sobic003G344200--Sobic010G115500 Sobic005G110541 Sobic005G110541 Sobic003G344200--Sobic005G110541 Sobic003G192600 Sobic003G192600 Sobic003G344200--Sobic003G192600 Sobic009G142800--Sobic009G016633 Sobic009G142800--Sobic003G344200 Sobic006G206700 Sobic006G206700 Sobic009G142800--Sobic006G206700 Sobic002G198500 Sobic002G198500 Sobic009G142800--Sobic002G198500 Sobic010G185200 Sobic010G185200 Sobic009G142800--Sobic010G185200 Sobic006G086700 Sobic006G086700 Sobic009G142800--Sobic006G086700 Sobic001G442500 Sobic001G442500 Sobic009G142800--Sobic001G442500 Sobic009G142800--Sobic010G115500 Sobic001G128100 Sobic001G128100 Sobic009G142800--Sobic001G128100 Sobic002G041200 Sobic002G041200 Sobic006G259700--Sobic002G041200 Sobic009G003000 Sobic009G003000 Sobic006G259700--Sobic009G003000 Sobic006G259700--Sobic008G150100 Sobic001G142800 Sobic001G142800 Sobic006G259700--Sobic001G142800 Sobic006G271500 Sobic006G271500 Sobic006G259700--Sobic006G271500 Sobic009G139900 Sobic009G139900 Sobic006G259700--Sobic009G139900 Sobic001G243100 Sobic001G243100 Sobic006G259700--Sobic001G243100 Sobic006G259700--Sobic010G115500 Sobic001G203400 Sobic001G203400 Sobic006G259700--Sobic001G203400 Sobic009G016633--Sobic009G142800 Sobic004G174900 Sobic004G174900 Sobic009G016633--Sobic004G174900 Sobic010G063100 Sobic010G063100 Sobic009G016633--Sobic010G063100 Sobic009G016633--Sobic003G344200 Sobic010G068500 Sobic010G068500 Sobic009G016633--Sobic010G068500 Sobic006G002900 Sobic006G002900 Sobic009G016633--Sobic006G002900 Sobic009G016633--Sobic010G115500 Sobic003G035100 Sobic003G035100 Sobic009G016633--Sobic003G035100 Sobic001G351100 Sobic001G351100 Sobic009G016633--Sobic001G351100 Sobic003G273600 Sobic003G273600 Sobic010G123400--Sobic003G273600 Sobic002G166300 Sobic002G166300 Sobic010G123400--Sobic002G166300 Sobic003G376400 Sobic003G376400 Sobic010G123400--Sobic003G376400 Sobic002G339500 Sobic002G339500 Sobic010G123400--Sobic002G339500 Sobic006G222100 Sobic006G222100 Sobic010G123400--Sobic006G222100 Sobic003G233600 Sobic003G233600 Sobic010G123400--Sobic003G233600 Sobic009G017400 Sobic009G017400 Sobic010G123400--Sobic009G017400 Sobic001G079200 Sobic001G079200 Sobic010G123400--Sobic001G079200 Sobic010G084000 Sobic010G084000 Sobic010G123400--Sobic010G084000 Sobic008G150100--Sobic006G259700 Sobic010G122000 Sobic010G122000 Sobic008G150100--Sobic010G122000 Sobic008G150100--Sobic003G192600 Sobic001G438700 Sobic001G438700 Sobic008G150100--Sobic001G438700 Sobic004G103400 Sobic004G103400 Sobic008G150100--Sobic004G103400 Sobic008G133700 Sobic008G133700 Sobic008G150100--Sobic008G133700 Sobic008G150100--Sobic001G353200 Sobic008G150100--Sobic003G344200 Sobic004G153100 Sobic004G153100 Sobic008G150100--Sobic004G153100 Sobic007G193200 Sobic007G193200 Sobic001G353200--Sobic007G193200 Sobic001G243150 Sobic001G243150 Sobic001G353200--Sobic001G243150 Sobic005G046400 Sobic005G046400 Sobic001G353200--Sobic005G046400 Sobic009G065700 Sobic009G065700 Sobic001G353200--Sobic009G065700 Sobic002G111900 Sobic002G111900 Sobic001G353200--Sobic002G111900 Sobic010G191600 Sobic010G191600 Sobic001G353200--Sobic010G191600 Sobic009G225800 Sobic009G225800 Sobic001G353200--Sobic009G225800 Sobic003G441800 Sobic003G441800 Sobic001G353200--Sobic003G441800 Sobic002G289500 Sobic002G289500 Sobic001G353200--Sobic002G289500 Sobic003G087900 Sobic003G087900 Sobic010G115500--Sobic003G087900 Sobic010G115500--Sobic010G123400 Sobic001G258000 Sobic001G258000 Sobic010G115500--Sobic001G258000 Sobic002G120300 Sobic002G120300 Sobic010G115500--Sobic002G120300 Sobic010G115500--Sobic006G259700 Sobic008G046800 Sobic008G046800 Sobic010G115500--Sobic008G046800 Sobic005G053900 Sobic005G053900 Sobic010G115500--Sobic005G053900 Sobic001G057200 Sobic001G057200 Sobic010G115500--Sobic001G057200 Sobic006G000700 Sobic006G000700 Sobic010G115500--Sobic006G000700 Sobic005G100800 Sobic005G100800 Sobic005G110541--Sobic005G100800 Sobic005G110541--Sobic007G193200 Sobic005G110541--Sobic001G353200 Sobic010G187500 Sobic010G187500 Sobic005G110541--Sobic010G187500 Sobic004G261500 Sobic004G261500 Sobic005G110541--Sobic004G261500 Sobic001G443100 Sobic001G443100 Sobic005G110541--Sobic001G443100 Sobic007G212000 Sobic007G212000 Sobic005G110541--Sobic007G212000 Sobic005G110541--Sobic001G243100 Sobic004G299500 Sobic004G299500 Sobic005G110541--Sobic004G299500 Sobic004G323900 Sobic004G323900 Sobic003G192600--Sobic004G323900 Sobic003G017601 Sobic003G017601 Sobic003G192600--Sobic003G017601 Sobic003G192600--Sobic005G110541 Sobic005G071900 Sobic005G071900 Sobic003G192600--Sobic005G071900 Sobic003G192600--Sobic010G122000 Sobic005G110511 Sobic005G110511 Sobic003G192600--Sobic005G110511 Sobic003G192600--Sobic001G353200 Sobic004G161900 Sobic004G161900 Sobic003G192600--Sobic004G161900 Sobic003G079100 Sobic003G079100 Sobic003G192600--Sobic003G079100
Octagon: transcription factors


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