Gene annotation
Transcriptome id Sobic.009G016633.1
Synonym -
Functional annotation -
UniProt A0A1Z5R158
Pfam PF00249
Panther DB PTHR10641 PTHR10641:SF591
NCBI CDD -
KEGG Orthology K09422; transcription factor MYB, plant
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G46130 : myb domain protein 48
RAP-DB (Rice) LOC_Os05g02420.2 : expressed protein
MaizeGDB (Corn) Zm00025a054415 , Zm00025a033716 , Zm00025a004957 , Zm00025a024262 , Zm00025a040887 , Zm00025a040888
Brachypodium KQJ86560 , KQK01840
Barley HORVU5Hr1G027750.1 , HORVU5Hr1G027750.2 , HORVU1Hr1G089770.1 , HORVU1Hr1G008810.4 , HORVU6Hr1G078300.1 , HORVU6Hr1G078300.2 , HORVU6Hr1G078300.3 , HORVU1Hr1G008810.1 , HORVU1Hr1G008810.3 , HORVU1Hr1G008810.5 , HORVU1Hr1G089770.2
Wheat TraesCS1D02G043300 , TraesCS1D02G043300 , TraesCS1A02G406600 , TraesCS6D02G298100 , TraesCS6D02G298100 , TraesCS3B02G224500 , TraesCS1B02G055200 , TraesCS1D02G415000 , TraesCS6B02G349100 , TraesCS5B02G105900 , TraesCS5D02G113300 , TraesCS1A02G042700 , TraesCS3A02G200300 , TraesCS5A02G101000 , TraesCS6A02G318900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G142800 amino acid transporter, putative, expressed -
2 Sobic.004G174900 - -
3 Sobic.010G063100 - -
4 Sobic.003G344200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@leaf senescence related protein, putative, expressed -
5 Sobic.010G068500 cyclic nucleotide-gated ion channel 14, putative, expressed K05391: cyclic nucleotide gated channel, plant
6 Sobic.006G002900 zinc finger, C3HC4 type, domain containing protein, expressed -
7 Sobic.010G115500 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed -
8 Sobic.003G035100 no apical meristem protein, putative, expressed -
9 Sobic.001G351100 LOL3, putative, expressed -
10 Sobic.006G055400 hydroxyproline-rich glycoprotein family protein, putative, expressed -
11 Sobic.007G132700 tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@ZIM motif family protein, expressed K13464: jasmonate ZIM domain-containing protein
12 Sobic.005G210000 expressed protein K11968: ariadne-1
13 Sobic.007G062200 expressed protein -
14 Sobic.010G123400 GRAM and C2 domains containing protein, putative, expressed -
15 Sobic.006G191100 tRNA-splicing endonuclease positive effector-related, putative, expressed K10706: SETX, senataxin
16 Sobic.003G059300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@verticillium wilt disease resistance protein, putative, expressed -
17 Sobic.006G175900 acyl-CoA thioesterase 2, putative, expressed -
18 Sobic.005G194300 proline-rich protein, putative, expressed -
19 Sobic.003G367300 actin, putative, expressed K10355: actin, other eukaryote
20 Sobic.001G342600 PDI, putative, expressed K17609: nucleoredoxin


Gene co-expression network
sample Sobic009G016633 Sobic009G016633 Sobic009G142800 Sobic009G142800 Sobic009G016633--Sobic009G142800 Sobic004G174900 Sobic004G174900 Sobic009G016633--Sobic004G174900 Sobic010G063100 Sobic010G063100 Sobic009G016633--Sobic010G063100 Sobic003G344200 Sobic003G344200 Sobic009G016633--Sobic003G344200 Sobic010G068500 Sobic010G068500 Sobic009G016633--Sobic010G068500 Sobic006G002900 Sobic006G002900 Sobic009G016633--Sobic006G002900 Sobic010G115500 Sobic010G115500 Sobic009G016633--Sobic010G115500 Sobic003G035100 Sobic003G035100 Sobic009G016633--Sobic003G035100 Sobic001G351100 Sobic001G351100 Sobic009G016633--Sobic001G351100 Sobic009G142800--Sobic009G016633 Sobic009G142800--Sobic003G344200 Sobic006G206700 Sobic006G206700 Sobic009G142800--Sobic006G206700 Sobic002G198500 Sobic002G198500 Sobic009G142800--Sobic002G198500 Sobic010G185200 Sobic010G185200 Sobic009G142800--Sobic010G185200 Sobic006G086700 Sobic006G086700 Sobic009G142800--Sobic006G086700 Sobic001G442500 Sobic001G442500 Sobic009G142800--Sobic001G442500 Sobic009G142800--Sobic010G115500 Sobic001G128100 Sobic001G128100 Sobic009G142800--Sobic001G128100 Sobic006G042200 Sobic006G042200 Sobic004G174900--Sobic006G042200 Sobic009G233300 Sobic009G233300 Sobic004G174900--Sobic009G233300 Sobic002G073900 Sobic002G073900 Sobic004G174900--Sobic002G073900 Sobic008G080200 Sobic008G080200 Sobic004G174900--Sobic008G080200 Sobic004G174900--Sobic001G351100 Sobic002G137800 Sobic002G137800 Sobic004G174900--Sobic002G137800 Sobic001G362200 Sobic001G362200 Sobic004G174900--Sobic001G362200 Sobic006G119800 Sobic006G119800 Sobic004G174900--Sobic006G119800 Sobic001G284800 Sobic001G284800 Sobic004G174900--Sobic001G284800 Sobic005G094200 Sobic005G094200 Sobic010G063100--Sobic005G094200 Sobic001G342600 Sobic001G342600 Sobic010G063100--Sobic001G342600 Sobic010G054500 Sobic010G054500 Sobic010G063100--Sobic010G054500 Sobic010G197700 Sobic010G197700 Sobic010G063100--Sobic010G197700 Sobic008G052500 Sobic008G052500 Sobic010G063100--Sobic008G052500 Sobic006G208100 Sobic006G208100 Sobic010G063100--Sobic006G208100 Sobic010G063100--Sobic009G016633 Sobic006G163900 Sobic006G163900 Sobic010G063100--Sobic006G163900 Sobic005G016900 Sobic005G016900 Sobic010G063100--Sobic005G016900 Sobic003G344200--Sobic009G142800 Sobic006G259700 Sobic006G259700 Sobic003G344200--Sobic006G259700 Sobic003G344200--Sobic009G016633 Sobic010G123400 Sobic010G123400 Sobic003G344200--Sobic010G123400 Sobic008G150100 Sobic008G150100 Sobic003G344200--Sobic008G150100 Sobic001G353200 Sobic001G353200 Sobic003G344200--Sobic001G353200 Sobic003G344200--Sobic010G115500 Sobic005G110541 Sobic005G110541 Sobic003G344200--Sobic005G110541 Sobic003G192600 Sobic003G192600 Sobic003G344200--Sobic003G192600 Sobic009G219000 Sobic009G219000 Sobic010G068500--Sobic009G219000 Sobic010G068500--Sobic006G119800 Sobic002G134600 Sobic002G134600 Sobic010G068500--Sobic002G134600 Sobic003G309200 Sobic003G309200 Sobic010G068500--Sobic003G309200 Sobic003G010400 Sobic003G010400 Sobic010G068500--Sobic003G010400 Sobic006G225600 Sobic006G225600 Sobic010G068500--Sobic006G225600 Sobic001G162100 Sobic001G162100 Sobic010G068500--Sobic001G162100 Sobic001G425800 Sobic001G425800 Sobic010G068500--Sobic001G425800 Sobic001G516100 Sobic001G516100 Sobic010G068500--Sobic001G516100 Sobic010G267700 Sobic010G267700 Sobic006G002900--Sobic010G267700 Sobic002G201900 Sobic002G201900 Sobic006G002900--Sobic002G201900 Sobic004G340800 Sobic004G340800 Sobic006G002900--Sobic004G340800 Sobic002G200700 Sobic002G200700 Sobic006G002900--Sobic002G200700 Sobic007G062200 Sobic007G062200 Sobic006G002900--Sobic007G062200 Sobic010G102800 Sobic010G102800 Sobic006G002900--Sobic010G102800 Sobic008G186400 Sobic008G186400 Sobic006G002900--Sobic008G186400 Sobic005G142700 Sobic005G142700 Sobic006G002900--Sobic005G142700 Sobic003G246200 Sobic003G246200 Sobic006G002900--Sobic003G246200 Sobic003G087900 Sobic003G087900 Sobic010G115500--Sobic003G087900 Sobic010G115500--Sobic010G123400 Sobic001G258000 Sobic001G258000 Sobic010G115500--Sobic001G258000 Sobic002G120300 Sobic002G120300 Sobic010G115500--Sobic002G120300 Sobic010G115500--Sobic006G259700 Sobic008G046800 Sobic008G046800 Sobic010G115500--Sobic008G046800 Sobic005G053900 Sobic005G053900 Sobic010G115500--Sobic005G053900 Sobic001G057200 Sobic001G057200 Sobic010G115500--Sobic001G057200 Sobic006G000700 Sobic006G000700 Sobic010G115500--Sobic006G000700 Sobic003G035100--Sobic003G309200 Sobic003G035100--Sobic002G134600 Sobic003G372800 Sobic003G372800 Sobic003G035100--Sobic003G372800 Sobic003G035100--Sobic010G068500 Sobic001G154500 Sobic001G154500 Sobic003G035100--Sobic001G154500 Sobic001G110900 Sobic001G110900 Sobic003G035100--Sobic001G110900 Sobic003G035100--Sobic009G233300 Sobic001G262700 Sobic001G262700 Sobic003G035100--Sobic001G262700 Sobic001G387600 Sobic001G387600 Sobic003G035100--Sobic001G387600 Sobic005G072200 Sobic005G072200 Sobic001G351100--Sobic005G072200 Sobic003G422700 Sobic003G422700 Sobic001G351100--Sobic003G422700 Sobic001G351100--Sobic006G042200 Sobic004G251300 Sobic004G251300 Sobic001G351100--Sobic004G251300 Sobic001G351100--Sobic004G340800 Sobic001G351100--Sobic002G137800 Sobic001G351100--Sobic002G073900 Sobic003G403500 Sobic003G403500 Sobic001G351100--Sobic003G403500 Sobic007G054100 Sobic007G054100 Sobic001G351100--Sobic007G054100
Octagon: transcription factors


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