Gene annotation
Transcriptome id Sobic.001G132800.1
Synonym CPK10, Sb01g011630, ATCDPK1, CDPK1
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
CAMK_CAMK_like.21 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
UniProt C5WPJ2
Pfam PF13499 PF07714
Panther DB PTHR24349 PTHR24349:SF167
NCBI CDD KOG0032; Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily
KEGG Orthology K13412; calcium-dependent protein kinase
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT1G74740 : calcium-dependent protein kinase 30
RAP-DB (Rice) LOC_Os03g48270.1 : CAMK_CAMK_like.21 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
MaizeGDB (Corn) Zm00025a028374 , Zm00025a043932 , Zm00025a037757 , Zm00025a017091 , Zm00025a033617 , Zm00025a016615 , Zm00025a032700 , Zm00025a016501 , Zm00025a008488 , Zm00025a010059 , Zm00025a048434 , Zm00025a008681
Brachypodium PNT69746 , KQK10428 , KQK12836 , KQK15660 , KQK05824 , KQJ84031 , KQJ89539 , KQK13735 , PNT73998 , PNT73999 , KQJ84030 , KQJ84217 , KQK15659
Barley HORVU1Hr1G070840.3 , HORVU1Hr1G070840.4 , HORVU7Hr1G056060.1 , HORVU7Hr1G056060.3 , HORVU7Hr1G056060.4 , HORVU7Hr1G056060.5 , HORVU7Hr1G056060.6 , HORVU7Hr1G056060.2 , HORVU7Hr1G056060.12 , HORVU7Hr1G056060.10 , HORVU7Hr1G056060.11 , HORVU1Hr1G070840.2 , HORVU4Hr1G004540.9 , HORVU4Hr1G004540.8 , HORVU4Hr1G004540.3 , HORVU4Hr1G004540.2 , HORVU4Hr1G004540.1 , HORVU4Hr1G004540.7 , HORVU4Hr1G004540.6 , HORVU4Hr1G004540.4 , HORVU1Hr1G070840.1 , HORVU4Hr1G004540.19 , HORVU4Hr1G004540.18 , HORVU4Hr1G004540.13 , HORVU4Hr1G004540.12 , HORVU4Hr1G004540.11 , HORVU4Hr1G004540.10 , HORVU4Hr1G004540.17 , HORVU4Hr1G004540.16 , HORVU4Hr1G004540.15 , HORVU4Hr1G004540.14 , HORVU2Hr1G096270.8 , HORVU2Hr1G096270.1 , HORVU2Hr1G096270.2 , HORVU2Hr1G096270.3 , HORVU2Hr1G096270.4 , HORVU2Hr1G096270.5 , HORVU2Hr1G096270.6 , HORVU2Hr1G096270.7 , HORVU7Hr1G056060.8 , HORVU7Hr1G056060.9 , HORVU7Hr1G056060.7 , HORVU4Hr1G004540.20 , HORVU3Hr1G087600.7 , HORVU3Hr1G087600.2 , HORVU3Hr1G087600.3 , HORVU3Hr1G087600.1 , HORVU3Hr1G087600.8 , HORVU5Hr1G110900.4 , HORVU5Hr1G110900.5 , HORVU5Hr1G110900.1 , HORVU5Hr1G110900.2 , HORVU5Hr1G110900.3 , HORVU5Hr1G078430.3 , HORVU5Hr1G078430.2 , HORVU5Hr1G078430.5 , HORVU5Hr1G078430.4 , HORVU5Hr1G030810.3 , HORVU5Hr1G030810.2 , HORVU5Hr1G030810.1 , HORVU5Hr1G030810.6 , HORVU5Hr1G030810.5 , HORVU5Hr1G030810.4
Wheat TraesCS3A02G351300 , TraesCS1D02G290700 , TraesCS4A02G283400 , TraesCS2A02G407200 , TraesCS5D02G434500 , TraesCS1A02G292200 , TraesCS1A02G292200 , TraesCS4D02G027600 , TraesCS7B02G165200 , TraesCS2B02G227000 , TraesCS1B02G301600 , TraesCS5D02G305200 , TraesCS5A02G298500 , TraesCS2D02G456400 , TraesCS5D02G475900 , TraesCS5D02G475900 , TraesCS4B02G030100 , TraesCS5B02G109300 , TraesCS5D02G434500 , TraesCS4B02G030100 , TraesCS5B02G428400 , TraesCS5B02G428400 , TraesCS5D02G124000 , TraesCS3D02G345500 , TraesCS5B02G297700 , TraesCS7A02G267000 , TraesCS2D02G207400 , TraesCS5A02G463100 , TraesCS2B02G478100 , TraesCS5A02G426500 , TraesCS5B02G474500 , TraesCS2D02G404200 , TraesCS2B02G424900 , TraesCS3B02G383800 , TraesCS2A02G199700 , TraesCS7D02G267700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G054500 ABC-2 type transporter domain containing protein, expressed -
2 Sobic.001G396400 expressed protein -
3 Sobic.005G110490 - -
4 Sobic.010G035900 expressed protein -
5 Sobic.006G156600 transporter family protein, putative, expressed -
6 Sobic.002G112300 subtilisin-like protease, putative, expressed -
7 Sobic.001G108350 - -
8 Sobic.007G009500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@TKL_IRAK_CR4L.6 - The CR4L subfamily has homology with Crinkly4, expressed -
9 Sobic.006G185900 cytochrome P450, putative, expressed -
10 Sobic.006G117500 polygalacturonase inhibitor 1 precursor, putative, expressed -
11 Sobic.005G092000 resistance protein, putative, expressed -
12 Sobic.009G027800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@phospholipase C, putative, expressed K05857: phosphatidylinositol phospholipase C, delta
13 Sobic.002G081850 - -
14 Sobic.005G066300 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
15 Sobic.007G018550 - -
16 Sobic.010G170300 Os9bglu31 - beta-glucosidase, dhurrinase, similar to G. max hydroxyisourate hydrolase, expressed K01188: beta-glucosidase
17 Sobic.009G015166 - -
18 Sobic.005G104200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
19 Sobic.005G089200 gibberellin receptor GID1L2, putative, expressed -
20 Sobic.004G108800 cytochrome P450, putative, expressed -


Gene co-expression network
sample Sobic001G132800 Sobic001G132800 Sobic007G054500 Sobic007G054500 Sobic001G132800--Sobic007G054500 Sobic001G396400 Sobic001G396400 Sobic001G132800--Sobic001G396400 Sobic005G110490 Sobic005G110490 Sobic001G132800--Sobic005G110490 Sobic010G035900 Sobic010G035900 Sobic001G132800--Sobic010G035900 Sobic006G156600 Sobic006G156600 Sobic001G132800--Sobic006G156600 Sobic002G112300 Sobic002G112300 Sobic001G132800--Sobic002G112300 Sobic001G108350 Sobic001G108350 Sobic001G132800--Sobic001G108350 Sobic007G009500 Sobic007G009500 Sobic001G132800--Sobic007G009500 Sobic006G185900 Sobic006G185900 Sobic001G132800--Sobic006G185900 Sobic007G054500--Sobic001G132800 Sobic007G054500--Sobic005G110490 Sobic007G054500--Sobic006G156600 Sobic006G075600 Sobic006G075600 Sobic007G054500--Sobic006G075600 Sobic007G054500--Sobic007G009500 Sobic007G054500--Sobic001G108350 Sobic007G137300 Sobic007G137300 Sobic007G054500--Sobic007G137300 Sobic007G054500--Sobic010G035900 Sobic004G257800 Sobic004G257800 Sobic007G054500--Sobic004G257800 Sobic007G018550 Sobic007G018550 Sobic001G396400--Sobic007G018550 Sobic001G396400--Sobic010G035900 Sobic001G396400--Sobic001G132800 Sobic005G121200 Sobic005G121200 Sobic001G396400--Sobic005G121200 Sobic009G027800 Sobic009G027800 Sobic001G396400--Sobic009G027800 Sobic001G396400--Sobic004G257800 Sobic001G396400--Sobic002G112300 Sobic005G115800 Sobic005G115800 Sobic001G396400--Sobic005G115800 Sobic003G019700 Sobic003G019700 Sobic001G396400--Sobic003G019700 Sobic005G110490--Sobic007G009500 Sobic001G006201 Sobic001G006201 Sobic005G110490--Sobic001G006201 Sobic004G248500 Sobic004G248500 Sobic005G110490--Sobic004G248500 Sobic005G115300 Sobic005G115300 Sobic005G110490--Sobic005G115300 Sobic001G503000 Sobic001G503000 Sobic005G110490--Sobic001G503000 Sobic010G192366 Sobic010G192366 Sobic005G110490--Sobic010G192366 Sobic007G167400 Sobic007G167400 Sobic005G110490--Sobic007G167400 Sobic004G312200 Sobic004G312200 Sobic005G110490--Sobic004G312200 Sobic002G318200 Sobic002G318200 Sobic005G110490--Sobic002G318200 Sobic005G092000 Sobic005G092000 Sobic010G035900--Sobic005G092000 Sobic010G035900--Sobic001G396400 Sobic010G035900--Sobic001G132800 Sobic008G087400 Sobic008G087400 Sobic010G035900--Sobic008G087400 Sobic010G035900--Sobic009G027800 Sobic010G035900--Sobic005G110490 Sobic007G172500 Sobic007G172500 Sobic010G035900--Sobic007G172500 Sobic002G167000 Sobic002G167000 Sobic010G035900--Sobic002G167000 Sobic004G172100 Sobic004G172100 Sobic010G035900--Sobic004G172100 Sobic006G156600--Sobic004G257800 Sobic006G156600--Sobic007G009500 Sobic002G075500 Sobic002G075500 Sobic006G156600--Sobic002G075500 Sobic004G007600 Sobic004G007600 Sobic006G156600--Sobic004G007600 Sobic006G156600--Sobic001G108350 Sobic006G156600--Sobic001G132800 Sobic009G125900 Sobic009G125900 Sobic006G156600--Sobic009G125900 Sobic003G254700 Sobic003G254700 Sobic006G156600--Sobic003G254700 Sobic006G156600--Sobic007G054500 Sobic002G112300--Sobic009G027800 Sobic002G112300--Sobic001G132800 Sobic002G112300--Sobic001G396400 Sobic003G015200 Sobic003G015200 Sobic002G112300--Sobic003G015200 Sobic002G112300--Sobic007G018550 Sobic004G108800 Sobic004G108800 Sobic002G112300--Sobic004G108800 Sobic005G152500 Sobic005G152500 Sobic002G112300--Sobic005G152500 Sobic005G089200 Sobic005G089200 Sobic002G112300--Sobic005G089200 Sobic002G112300--Sobic010G035900 Sobic002G372800 Sobic002G372800 Sobic001G108350--Sobic002G372800 Sobic001G108350--Sobic004G257800 Sobic001G108350--Sobic007G137300 Sobic001G108350--Sobic006G156600 Sobic003G016600 Sobic003G016600 Sobic001G108350--Sobic003G016600 Sobic001G108350--Sobic005G110490 Sobic001G108350--Sobic007G009500 Sobic001G080300 Sobic001G080300 Sobic001G108350--Sobic001G080300 Sobic006G087900 Sobic006G087900 Sobic001G108350--Sobic006G087900 Sobic003G045900 Sobic003G045900 Sobic007G009500--Sobic003G045900 Sobic007G009500--Sobic005G110490 Sobic001G072600 Sobic001G072600 Sobic007G009500--Sobic001G072600 Sobic001G360700 Sobic001G360700 Sobic007G009500--Sobic001G360700 Sobic007G009500--Sobic006G156600 Sobic004G232900 Sobic004G232900 Sobic007G009500--Sobic004G232900 Sobic007G009500--Sobic002G372800 Sobic004G339800 Sobic004G339800 Sobic007G009500--Sobic004G339800 Sobic001G133900 Sobic001G133900 Sobic007G009500--Sobic001G133900 Sobic006G185900--Sobic001G132800 Sobic004G277800 Sobic004G277800 Sobic006G185900--Sobic004G277800 Sobic004G156250 Sobic004G156250 Sobic006G185900--Sobic004G156250 Sobic007G106500 Sobic007G106500 Sobic006G185900--Sobic007G106500 Sobic004G156300 Sobic004G156300 Sobic006G185900--Sobic004G156300 Sobic003G040600 Sobic003G040600 Sobic006G185900--Sobic003G040600 Sobic006G185900--Sobic004G108800 Sobic003G287400 Sobic003G287400 Sobic006G185900--Sobic003G287400 Sobic005G104200 Sobic005G104200 Sobic006G185900--Sobic005G104200
Octagon: transcription factors


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