Gene annotation
Transcriptome id Sobic.006G185900.1
Synonym CYP704A2, Sb06g025990
Functional annotation cytochrome P450, putative, expressed
UniProt C5YE57
Pfam PF00067
Panther DB PTHR24296 PTHR24296:SF19
NCBI CDD KOG0157; Cytochrome P450 CYP4/CYP19/CYP26 subfamilies
KEGG Orthology -
Gene Ontology GO:0016705; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0005506iron ion binding


Orthologs (automatic annotation)
TAIR AT2G45510 : cytochrome P450, family 704, subfamily A, polypeptide 2
RAP-DB (Rice) LOC_Os04g48460.1 : cytochrome P450, putative, expressed
MaizeGDB (Corn) Zm00025a056745 , Zm00025a010138 , Zm00025a051414
Brachypodium KQJ97541 , KQJ97540 , KQJ84136
Barley HORVU0Hr1G022540.4 , HORVU0Hr1G022540.3 , HORVU0Hr1G022540.1 , HORVU3Hr1G015120.4 , HORVU3Hr1G015120.5 , HORVU3Hr1G015120.6 , HORVU3Hr1G015120.1 , HORVU3Hr1G015120.2 , HORVU3Hr1G015120.3 , HORVU2Hr1G094630.4 , HORVU2Hr1G094630.2 , HORVU2Hr1G094630.3 , HORVU2Hr1G094630.1
Wheat TraesCS3B02G100000 , TraesCS3D02G334900 , TraesCS3D02G334900 , TraesCS3B02G099900 , TraesCS3B02G099900 , TraesCS3B02G099900 , TraesCS7B02G439000 , TraesCS3D02G084900 , TraesCS2A02G398800 , TraesCS3A02G084700 , TraesCS7A02G521800 , TraesCS3B02G373400 , TraesCS3B02G099600 , TraesCS3B02G099700 , TraesCS7D02G511300 , TraesCS1B02G195000 , TraesCS2B02G416700 , TraesCS3B02G373300 , TraesCS2A02G398800 , TraesCS7B02G472900 , TraesCS3A02G084800 , TraesCS2D02G396300 , TraesCS2D02G396300 , TraesCS3D02G084600 , TraesCS3D02G084700 , TraesCS3A02G082900 , TraesCS3D02G334800
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.006G185900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G132800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CAMK_CAMK_like.21 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
2 Sobic.004G277800 ADP-ribosylation factor, putative, expressed K07937: ADP-ribosylation factor 1/2
3 Sobic.004G156250 - -
4 Sobic.007G106500 "C3 PTPC, unknown so far"(PubMedID : 2308851)@phosphoenolpyruvate carboxylase, putative, expressed K01595: phosphoenolpyruvate carboxylase
5 Sobic.004G156300 "domain confirmed by Pfam database, expression supported by NCBI EST database"(PubMedID : 20499123)@OsSAUR10 - Auxin-responsive SAUR gene family member, expressed K14488: SAUR family protein
6 Sobic.003G040600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@endonuclease/exonuclease/phosphatase family domain containing protein, expressed -
7 Sobic.004G108800 cytochrome P450, putative, expressed -
8 Sobic.003G287400 respiratory burst oxidase, putative, expressed K13447: respiratory burst oxidase
9 Sobic.005G104200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
10 Sobic.002G163200 - -
11 Sobic.007G038600 monodehydroascorbate reductase, putative, expressed K08232: monodehydroascorbate reductase (NADH)
12 Sobic.001G238500 similar to Putative uncharacterized protein(PubMedID : 29862293)@UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed K13691: pathogen-inducible salicylic acid glucosyltransferase
13 Sobic.006G117500 polygalacturonase inhibitor 1 precursor, putative, expressed -
14 Sobic.003G287450 - -
15 Sobic.005G149600 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@cytochrome P450, putative, expressed -
16 Sobic.005G075400 CHASE domain containing protein, expressed -
17 Sobic.009G176800 DUF567 domain containing protein, putative, expressed -
18 Sobic.005G089200 gibberellin receptor GID1L2, putative, expressed -
19 Sobic.001G464300 helix-loop-helix DNA-binding domain containing protein, expressed -
20 Sobic.005G115300 expressed protein -


Gene co-expression network
sample Sobic006G185900 Sobic006G185900 Sobic001G132800 Sobic001G132800 Sobic006G185900--Sobic001G132800 Sobic004G277800 Sobic004G277800 Sobic006G185900--Sobic004G277800 Sobic004G156250 Sobic004G156250 Sobic006G185900--Sobic004G156250 Sobic007G106500 Sobic007G106500 Sobic006G185900--Sobic007G106500 Sobic004G156300 Sobic004G156300 Sobic006G185900--Sobic004G156300 Sobic003G040600 Sobic003G040600 Sobic006G185900--Sobic003G040600 Sobic004G108800 Sobic004G108800 Sobic006G185900--Sobic004G108800 Sobic003G287400 Sobic003G287400 Sobic006G185900--Sobic003G287400 Sobic005G104200 Sobic005G104200 Sobic006G185900--Sobic005G104200 Sobic007G054500 Sobic007G054500 Sobic001G132800--Sobic007G054500 Sobic001G396400 Sobic001G396400 Sobic001G132800--Sobic001G396400 Sobic005G110490 Sobic005G110490 Sobic001G132800--Sobic005G110490 Sobic010G035900 Sobic010G035900 Sobic001G132800--Sobic010G035900 Sobic006G156600 Sobic006G156600 Sobic001G132800--Sobic006G156600 Sobic002G112300 Sobic002G112300 Sobic001G132800--Sobic002G112300 Sobic001G108350 Sobic001G108350 Sobic001G132800--Sobic001G108350 Sobic007G009500 Sobic007G009500 Sobic001G132800--Sobic007G009500 Sobic001G132800--Sobic006G185900 Sobic001G348800 Sobic001G348800 Sobic004G277800--Sobic001G348800 Sobic004G248500 Sobic004G248500 Sobic004G277800--Sobic004G248500 Sobic002G238700 Sobic002G238700 Sobic004G277800--Sobic002G238700 Sobic005G115300 Sobic005G115300 Sobic004G277800--Sobic005G115300 Sobic004G312200 Sobic004G312200 Sobic004G277800--Sobic004G312200 Sobic004G277800--Sobic005G104200 Sobic001G238500 Sobic001G238500 Sobic004G277800--Sobic001G238500 Sobic001G464300 Sobic001G464300 Sobic004G277800--Sobic001G464300 Sobic002G003400 Sobic002G003400 Sobic004G277800--Sobic002G003400 Sobic004G156250--Sobic004G108800 Sobic004G156250--Sobic005G104200 Sobic004G156250--Sobic001G238500 Sobic005G149600 Sobic005G149600 Sobic004G156250--Sobic005G149600 Sobic001G131001 Sobic001G131001 Sobic004G156250--Sobic001G131001 Sobic004G126500 Sobic004G126500 Sobic004G156250--Sobic004G126500 Sobic009G015166 Sobic009G015166 Sobic004G156250--Sobic009G015166 Sobic006G117500 Sobic006G117500 Sobic004G156250--Sobic006G117500 Sobic005G089200 Sobic005G089200 Sobic004G156250--Sobic005G089200 Sobic007G038600 Sobic007G038600 Sobic007G106500--Sobic007G038600 Sobic001G173700 Sobic001G173700 Sobic007G106500--Sobic001G173700 Sobic007G106500--Sobic001G238500 Sobic007G106500--Sobic004G126500 Sobic007G106500--Sobic001G131001 Sobic007G106500--Sobic005G104200 Sobic007G172500 Sobic007G172500 Sobic007G106500--Sobic007G172500 Sobic007G020700 Sobic007G020700 Sobic007G106500--Sobic007G020700 Sobic007G106500--Sobic001G464300 Sobic004G156300--Sobic004G156250 Sobic004G156300--Sobic006G117500 Sobic004G156300--Sobic004G108800 Sobic004G156300--Sobic005G104200 Sobic004G156300--Sobic005G149600 Sobic005G066000 Sobic005G066000 Sobic004G156300--Sobic005G066000 Sobic002G163200 Sobic002G163200 Sobic004G156300--Sobic002G163200 Sobic004G156300--Sobic001G131001 Sobic004G156300--Sobic005G089200 Sobic009G073800 Sobic009G073800 Sobic003G040600--Sobic009G073800 Sobic006G183900 Sobic006G183900 Sobic003G040600--Sobic006G183900 Sobic003G083200 Sobic003G083200 Sobic003G040600--Sobic003G083200 Sobic006G282300 Sobic006G282300 Sobic003G040600--Sobic006G282300 Sobic008G034700 Sobic008G034700 Sobic003G040600--Sobic008G034700 Sobic002G318200 Sobic002G318200 Sobic003G040600--Sobic002G318200 Sobic001G212451 Sobic001G212451 Sobic003G040600--Sobic001G212451 Sobic003G040600--Sobic004G248500 Sobic003G415400 Sobic003G415400 Sobic003G040600--Sobic003G415400 Sobic004G108800--Sobic005G149600 Sobic004G108800--Sobic005G089200 Sobic007G156800 Sobic007G156800 Sobic004G108800--Sobic007G156800 Sobic004G108800--Sobic006G117500 Sobic004G108800--Sobic004G156250 Sobic003G015200 Sobic003G015200 Sobic004G108800--Sobic003G015200 Sobic004G108800--Sobic009G015166 Sobic005G152500 Sobic005G152500 Sobic004G108800--Sobic005G152500 Sobic007G038500 Sobic007G038500 Sobic004G108800--Sobic007G038500 Sobic003G287450 Sobic003G287450 Sobic003G287400--Sobic003G287450 Sobic004G161900 Sobic004G161900 Sobic003G287400--Sobic004G161900 Sobic005G134600 Sobic005G134600 Sobic003G287400--Sobic005G134600 Sobic003G287400--Sobic004G312200 Sobic006G075600 Sobic006G075600 Sobic003G287400--Sobic006G075600 Sobic001G503000 Sobic001G503000 Sobic003G287400--Sobic001G503000 Sobic004G323900 Sobic004G323900 Sobic003G287400--Sobic004G323900 Sobic001G218500 Sobic001G218500 Sobic003G287400--Sobic001G218500 Sobic007G119800 Sobic007G119800 Sobic003G287400--Sobic007G119800 Sobic005G104200--Sobic001G238500 Sobic001G506600 Sobic001G506600 Sobic005G104200--Sobic001G506600 Sobic002G019100 Sobic002G019100 Sobic005G104200--Sobic002G019100 Sobic005G104200--Sobic001G503000 Sobic005G104200--Sobic006G117500 Sobic005G104200--Sobic004G126500 Sobic006G009700 Sobic006G009700 Sobic005G104200--Sobic006G009700 Sobic002G411000 Sobic002G411000 Sobic005G104200--Sobic002G411000 Sobic005G104200--Sobic001G348800
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.