Gene annotation
Transcriptome id Sobic.003G040600.1
Synonym AT5PTASE1, IP5PI, Sb03g003620, AT5P1, ATIP5PI
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence." (PubMedID : 27586543)
endonuclease/exonuclease/phosphatase family domain containing protein, expressed
UniProt C5XMM8
Pfam PF03372
Panther DB PTHR11200 PTHR11200:SF175
NCBI CDD KOG0565; Inositol polyphosphate 5-phosphatase and related proteins
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G71710 : DNAse I-like superfamily protein
RAP-DB (Rice) LOC_Os01g08780.1 : endonuclease/exonuclease/phosphatase family domain containing protein, expressed
MaizeGDB (Corn) Zm00025a023150 , Zm00025a008074 , Zm00025a034374
Brachypodium KQK03060 , KQK03057 , KQK03059 , KQK03058
Barley HORVU3Hr1G020880.13 , HORVU3Hr1G020880.12 , HORVU3Hr1G020880.11 , HORVU3Hr1G020880.10 , HORVU3Hr1G020880.17 , HORVU3Hr1G020880.16 , HORVU3Hr1G020880.15 , HORVU3Hr1G020880.14 , HORVU3Hr1G020880.3 , HORVU3Hr1G020880.1 , HORVU3Hr1G020880.5 , HORVU3Hr1G020880.4 , HORVU3Hr1G020880.2 , HORVU3Hr1G020880.7 , HORVU3Hr1G020880.9 , HORVU3Hr1G020880.8 , HORVU4Hr1G073350.2 , HORVU4Hr1G073350.1 , HORVU4Hr1G073350.5 , HORVU4Hr1G073350.6 , HORVU4Hr1G073350.7 , HORVU4Hr1G073350.8
Wheat TraesCS3B02G134900 , TraesCS3B02G134300 , TraesCS3A02G114900 , TraesCS3D02G117300 , TraesCS3D02G117300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G073800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@helix-loop-helix DNA-binding domain containing protein, expressed -
2 Sobic.006G183900 cytochrome P450, putative, expressed -
3 Sobic.003G083200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@calmodulin binding protein, putative, expressed -
4 Sobic.006G282300 - -
5 Sobic.008G034700 phytosulfokines precursor, putative, expressed -
6 Sobic.002G318200 expressed protein -
7 Sobic.001G212451 - -
8 Sobic.004G248500 GDSL-like lipase/acylhydrolase, putative, expressed -
9 Sobic.003G415400 RALFL1 - Rapid ALkalinization Factor RALF family protein precursor, putative, expressed -
10 Sobic.002G318300 MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
11 Sobic.004G346400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
12 Sobic.001G026300 sex determination protein tasselseed-2, putative, expressed -
13 Sobic.005G041300 amino acid permease family protein, putative, expressed -
14 Sobic.001G108000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@maf, putative, expressed K06287: septum formation protein
15 Sobic.001G055400 WRKY6, expressed -
16 Sobic.004G277800 ADP-ribosylation factor, putative, expressed K07937: ADP-ribosylation factor 1/2
17 Sobic.004G126700 glycosyl hydrolases family 16, putative, expressed K08235: xyloglucan:xyloglucosyl transferase
18 Sobic.001G318000 glutathione S-transferase GSTU6, putative, expressed K00799: GST, glutathione S-transferase
19 Sobic.005G066000 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
20 Sobic.007G109600 expressed protein -


Gene co-expression network
sample Sobic003G040600 Sobic003G040600 Sobic009G073800 Sobic009G073800 Sobic003G040600--Sobic009G073800 Sobic006G183900 Sobic006G183900 Sobic003G040600--Sobic006G183900 Sobic003G083200 Sobic003G083200 Sobic003G040600--Sobic003G083200 Sobic006G282300 Sobic006G282300 Sobic003G040600--Sobic006G282300 Sobic008G034700 Sobic008G034700 Sobic003G040600--Sobic008G034700 Sobic002G318200 Sobic002G318200 Sobic003G040600--Sobic002G318200 Sobic001G212451 Sobic001G212451 Sobic003G040600--Sobic001G212451 Sobic004G248500 Sobic004G248500 Sobic003G040600--Sobic004G248500 Sobic003G415400 Sobic003G415400 Sobic003G040600--Sobic003G415400 Sobic009G073800--Sobic008G034700 Sobic008G172500 Sobic008G172500 Sobic009G073800--Sobic008G172500 Sobic003G269500 Sobic003G269500 Sobic009G073800--Sobic003G269500 Sobic002G365600 Sobic002G365600 Sobic009G073800--Sobic002G365600 Sobic005G066000 Sobic005G066000 Sobic009G073800--Sobic005G066000 Sobic002G389100 Sobic002G389100 Sobic009G073800--Sobic002G389100 Sobic009G073800--Sobic006G183900 Sobic006G074200 Sobic006G074200 Sobic009G073800--Sobic006G074200 Sobic010G067400 Sobic010G067400 Sobic009G073800--Sobic010G067400 Sobic003G287200 Sobic003G287200 Sobic006G183900--Sobic003G287200 Sobic007G109600 Sobic007G109600 Sobic006G183900--Sobic007G109600 Sobic006G028400 Sobic006G028400 Sobic006G183900--Sobic006G028400 Sobic007G090472 Sobic007G090472 Sobic006G183900--Sobic007G090472 Sobic006G183900--Sobic008G034700 Sobic006G183900--Sobic004G248500 Sobic007G170300 Sobic007G170300 Sobic006G183900--Sobic007G170300 Sobic006G183900--Sobic002G365600 Sobic002G365500 Sobic002G365500 Sobic006G183900--Sobic002G365500 Sobic004G177000 Sobic004G177000 Sobic003G083200--Sobic004G177000 Sobic007G014200 Sobic007G014200 Sobic003G083200--Sobic007G014200 Sobic010G001300 Sobic010G001300 Sobic003G083200--Sobic010G001300 Sobic010G192366 Sobic010G192366 Sobic003G083200--Sobic010G192366 Sobic005G033000 Sobic005G033000 Sobic003G083200--Sobic005G033000 Sobic003G227700 Sobic003G227700 Sobic003G083200--Sobic003G227700 Sobic006G101900 Sobic006G101900 Sobic003G083200--Sobic006G101900 Sobic003G083200--Sobic003G040600 Sobic002G183750 Sobic002G183750 Sobic003G083200--Sobic002G183750 Sobic002G365550 Sobic002G365550 Sobic006G282300--Sobic002G365550 Sobic004G071000 Sobic004G071000 Sobic006G282300--Sobic004G071000 Sobic002G365801 Sobic002G365801 Sobic006G282300--Sobic002G365801 Sobic006G282300--Sobic006G028400 Sobic008G055100 Sobic008G055100 Sobic006G282300--Sobic008G055100 Sobic010G096400 Sobic010G096400 Sobic006G282300--Sobic010G096400 Sobic010G212500 Sobic010G212500 Sobic006G282300--Sobic010G212500 Sobic003G119500 Sobic003G119500 Sobic006G282300--Sobic003G119500 Sobic007G178900 Sobic007G178900 Sobic006G282300--Sobic007G178900 Sobic008G034700--Sobic006G183900 Sobic008G034700--Sobic007G109600 Sobic008G034700--Sobic002G365600 Sobic008G048400 Sobic008G048400 Sobic008G034700--Sobic008G048400 Sobic008G034700--Sobic003G269500 Sobic005G041300 Sobic005G041300 Sobic008G034700--Sobic005G041300 Sobic008G034700--Sobic009G073800 Sobic004G126700 Sobic004G126700 Sobic008G034700--Sobic004G126700 Sobic008G034700--Sobic002G365500 Sobic001G360500 Sobic001G360500 Sobic002G318200--Sobic001G360500 Sobic003G203600 Sobic003G203600 Sobic002G318200--Sobic003G203600 Sobic002G318200--Sobic006G183900 Sobic002G216100 Sobic002G216100 Sobic002G318200--Sobic002G216100 Sobic005G046700 Sobic005G046700 Sobic002G318200--Sobic005G046700 Sobic007G165400 Sobic007G165400 Sobic002G318200--Sobic007G165400 Sobic006G229100 Sobic006G229100 Sobic002G318200--Sobic006G229100 Sobic002G404100 Sobic002G404100 Sobic002G318200--Sobic002G404100 Sobic004G139300 Sobic004G139300 Sobic002G318200--Sobic004G139300 Sobic001G464300 Sobic001G464300 Sobic001G212451--Sobic001G464300 Sobic001G212451--Sobic004G248500 Sobic002G391200 Sobic002G391200 Sobic001G212451--Sobic002G391200 Sobic010G021700 Sobic010G021700 Sobic001G212451--Sobic010G021700 Sobic005G097600 Sobic005G097600 Sobic001G212451--Sobic005G097600 Sobic001G212451--Sobic007G109600 Sobic002G307900 Sobic002G307900 Sobic001G212451--Sobic002G307900 Sobic005G036900 Sobic005G036900 Sobic001G212451--Sobic005G036900 Sobic001G301400 Sobic001G301400 Sobic001G212451--Sobic001G301400 Sobic005G115300 Sobic005G115300 Sobic004G248500--Sobic005G115300 Sobic001G503000 Sobic001G503000 Sobic004G248500--Sobic001G503000 Sobic004G248500--Sobic001G464300 Sobic004G248500--Sobic007G109600 Sobic004G312200 Sobic004G312200 Sobic004G248500--Sobic004G312200 Sobic001G348800 Sobic001G348800 Sobic004G248500--Sobic001G348800 Sobic004G248500--Sobic006G183900 Sobic005G104200 Sobic005G104200 Sobic004G248500--Sobic005G104200 Sobic001G263300 Sobic001G263300 Sobic004G248500--Sobic001G263300 Sobic004G258900 Sobic004G258900 Sobic003G415400--Sobic004G258900 Sobic003G415400--Sobic005G041300 Sobic003G415400--Sobic006G282300 Sobic003G415400--Sobic002G216100 Sobic008G102800 Sobic008G102800 Sobic003G415400--Sobic008G102800 Sobic003G415400--Sobic010G096400 Sobic003G415400--Sobic004G139300 Sobic003G415400--Sobic007G178900 Sobic002G101400 Sobic002G101400 Sobic003G415400--Sobic002G101400
Octagon: transcription factors


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