Gene annotation
Transcriptome id Sobic.005G075400.2,Sobic.005G075400.1
Synonym
Functional annotation CHASE domain containing protein, expressed
UniProt A0A1Z5RHJ9 , A0A1B6PQR4
Pfam PF00069
Panther DB PTHR27007 PTHR27007:SF16
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT5G10530 : Concanavalin A-like lectin protein kinase family protein
RAP-DB (Rice) LOC_Os12g26940.1 : CHASE domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat TraesCS7A02G507600
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G018200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@nucleoside-triphosphatase, putative, expressed K14641: apyrase
2 Sobic.001G503000 "domain confirmed by Pfam database, expressed in leaf and root, expression induced by IAA treatment"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
3 Sobic.008G138900 MLA12, putative, expressed -
4 Sobic.007G073000 - -
5 Sobic.002G195600 Cinnamyl alcohol dehydrogenase(PubMedID : 28606901)@Cinnamyl alcohol dehydrogenase(PubMedID : 19087955)@dehydrogenase, putative, expressed K00083: cinnamyl-alcohol dehydrogenase
6 Sobic.001G506600 exostosin family domain containing protein, expressed -
7 Sobic.006G209000 Protein transferase (Os)(PubMedID : 27208977)@transferase family domain containing protein, expressed -
8 Sobic.006G229100 receptor-like kinase, putative, expressed -
9 Sobic.006G031100 CAP (Cysteine-rich secretory proteins("PubMedID : 26759170,PubMedID : 24597475")@SCP-like extracellular protein, expressed -
10 Sobic.006G196400 U-box, putative, expressed -
11 Sobic.001G348800 OsSCP18 - Putative Serine Carboxypeptidase homologue, expressed K09646: serine carboxypeptidase 1
12 Sobic.003G240400 leaf senescence related protein, putative, expressed -
13 Sobic.001G002800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. late senescence marker during developmental senescence(PubMedID : 27586543)@expressed protein -
14 Sobic.005G177400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./middle senescence marker during developmental senescence(PubMedID : 27586543)@glycosyl hydrolase, putative, expressed K01183: chitinase
15 Sobic.002G185600 transporter, putative, expressed -
16 Sobic.001G343766 - -
17 Sobic.004G322000 hypro1, putative, expressed -
18 Sobic.007G090472 - -
19 Sobic.003G215300 pleiotropic drug resistance protein, putative, expressed -
20 Sobic.010G115600 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed -


Gene co-expression network
sample Sobic005G075400 Sobic005G075400 Sobic005G018200 Sobic005G018200 Sobic005G075400--Sobic005G018200 Sobic001G503000 Sobic001G503000 Sobic005G075400--Sobic001G503000 Sobic008G138900 Sobic008G138900 Sobic005G075400--Sobic008G138900 Sobic007G073000 Sobic007G073000 Sobic005G075400--Sobic007G073000 Sobic002G195600 Sobic002G195600 Sobic005G075400--Sobic002G195600 Sobic001G506600 Sobic001G506600 Sobic005G075400--Sobic001G506600 Sobic006G209000 Sobic006G209000 Sobic005G075400--Sobic006G209000 Sobic006G229100 Sobic006G229100 Sobic005G075400--Sobic006G229100 Sobic006G031100 Sobic006G031100 Sobic005G075400--Sobic006G031100 Sobic005G018200--Sobic002G195600 Sobic005G018200--Sobic008G138900 Sobic005G018200--Sobic007G073000 Sobic005G018200--Sobic001G503000 Sobic005G018200--Sobic005G075400 Sobic003G215300 Sobic003G215300 Sobic005G018200--Sobic003G215300 Sobic006G196400 Sobic006G196400 Sobic005G018200--Sobic006G196400 Sobic005G177400 Sobic005G177400 Sobic005G018200--Sobic005G177400 Sobic005G052700 Sobic005G052700 Sobic005G018200--Sobic005G052700 Sobic001G503000--Sobic001G506600 Sobic010G096700 Sobic010G096700 Sobic001G503000--Sobic010G096700 Sobic005G115300 Sobic005G115300 Sobic001G503000--Sobic005G115300 Sobic001G503000--Sobic003G215300 Sobic005G104200 Sobic005G104200 Sobic001G503000--Sobic005G104200 Sobic001G503000--Sobic006G209000 Sobic001G503000--Sobic008G138900 Sobic010G082000 Sobic010G082000 Sobic001G503000--Sobic010G082000 Sobic004G322000 Sobic004G322000 Sobic001G503000--Sobic004G322000 Sobic005G182800 Sobic005G182800 Sobic008G138900--Sobic005G182800 Sobic008G138900--Sobic001G503000 Sobic003G079100 Sobic003G079100 Sobic008G138900--Sobic003G079100 Sobic004G014600 Sobic004G014600 Sobic008G138900--Sobic004G014600 Sobic005G065700 Sobic005G065700 Sobic008G138900--Sobic005G065700 Sobic008G138900--Sobic002G195600 Sobic002G029600 Sobic002G029600 Sobic008G138900--Sobic002G029600 Sobic007G154100 Sobic007G154100 Sobic008G138900--Sobic007G154100 Sobic008G138900--Sobic001G506600 Sobic006G092700 Sobic006G092700 Sobic007G073000--Sobic006G092700 Sobic003G322100 Sobic003G322100 Sobic007G073000--Sobic003G322100 Sobic007G073000--Sobic003G215300 Sobic002G146000 Sobic002G146000 Sobic007G073000--Sobic002G146000 Sobic006G135300 Sobic006G135300 Sobic007G073000--Sobic006G135300 Sobic007G073000--Sobic002G195600 Sobic007G073000--Sobic010G082000 Sobic007G090472 Sobic007G090472 Sobic007G073000--Sobic007G090472 Sobic003G240400 Sobic003G240400 Sobic007G073000--Sobic003G240400 Sobic002G195600--Sobic007G073000 Sobic002G195600--Sobic006G196400 Sobic002G195600--Sobic008G138900 Sobic002G195600--Sobic003G215300 Sobic002G195600--Sobic003G240400 Sobic002G195600--Sobic004G014600 Sobic007G090600 Sobic007G090600 Sobic002G195600--Sobic007G090600 Sobic002G195600--Sobic006G092700 Sobic002G195600--Sobic006G135300 Sobic001G506600--Sobic010G096700 Sobic001G506600--Sobic001G503000 Sobic001G506600--Sobic005G104200 Sobic001G506600--Sobic002G029600 Sobic002G411000 Sobic002G411000 Sobic001G506600--Sobic002G411000 Sobic002G019100 Sobic002G019100 Sobic001G506600--Sobic002G019100 Sobic001G506600--Sobic004G322000 Sobic001G506600--Sobic006G209000 Sobic001G506600--Sobic003G215300 Sobic006G209000--Sobic007G154100 Sobic006G108300 Sobic006G108300 Sobic006G209000--Sobic006G108300 Sobic005G071900 Sobic005G071900 Sobic006G209000--Sobic005G071900 Sobic004G312500 Sobic004G312500 Sobic006G209000--Sobic004G312500 Sobic006G209000--Sobic001G503000 Sobic006G209000--Sobic002G029600 Sobic006G209000--Sobic010G096700 Sobic006G209000--Sobic001G506600 Sobic009G106100 Sobic009G106100 Sobic006G209000--Sobic009G106100 Sobic006G229100--Sobic007G090472 Sobic006G229100--Sobic010G082000 Sobic006G229100--Sobic005G115300 Sobic001G360500 Sobic001G360500 Sobic006G229100--Sobic001G360500 Sobic006G229100--Sobic001G503000 Sobic003G287200 Sobic003G287200 Sobic006G229100--Sobic003G287200 Sobic006G229100--Sobic010G096700 Sobic006G229100--Sobic006G135300 Sobic001G149400 Sobic001G149400 Sobic006G229100--Sobic001G149400 Sobic006G031100--Sobic007G090600 Sobic006G031100--Sobic003G215300 Sobic006G031100--Sobic006G196400 Sobic006G031100--Sobic002G029600 Sobic006G031100--Sobic004G014600 Sobic006G031100--Sobic005G182800 Sobic006G085700 Sobic006G085700 Sobic006G031100--Sobic006G085700 Sobic006G031100--Sobic004G322000 Sobic006G205700 Sobic006G205700 Sobic006G031100--Sobic006G205700
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.