Gene annotation
Transcriptome id Sobic.004G156300.3,Sobic.004G156300.2
Synonym SbSAUR36, Sb04g020740, small auxin up RNA
Functional annotation "domain confirmed by Pfam database, expression supported by NCBI EST database" (PubMedID : 20499123)
OsSAUR10 - Auxin-responsive SAUR gene family member, expressed
UniProt A0A194YPW8
Pfam PF02519
Panther DB PTHR31374 PTHR31374:SF26
NCBI CDD -
KEGG Orthology K14488; SAUR family protein
Gene Ontology GO:0009733; response to auxin


Orthologs (automatic annotation)
TAIR AT5G50760 : SAUR-like auxin-responsive protein family
RAP-DB (Rice) LOC_Os02g30810.1 : OsSAUR10 - Auxin-responsive SAUR gene family member, expressed
MaizeGDB (Corn) Zm00025a020425
Brachypodium KQJ99602
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G156250 - -
2 Sobic.006G117500 polygalacturonase inhibitor 1 precursor, putative, expressed -
3 Sobic.004G108800 cytochrome P450, putative, expressed -
4 Sobic.005G104200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
5 Sobic.005G149600 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@cytochrome P450, putative, expressed -
6 Sobic.005G066000 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
7 Sobic.002G163200 - -
8 Sobic.001G131001 - -
9 Sobic.005G089200 gibberellin receptor GID1L2, putative, expressed -
10 Sobic.001G464300 helix-loop-helix DNA-binding domain containing protein, expressed -
11 Sobic.004G248500 GDSL-like lipase/acylhydrolase, putative, expressed -
12 Sobic.001G026300 sex determination protein tasselseed-2, putative, expressed -
13 Sobic.010G274400 reticuline oxidase-like protein precursor, putative, expressed -
14 Sobic.001G212451 - -
15 Sobic.003G015200 Sugar transporter(PubMedID : 27330561)@Sugar transporter(PubMedID : 27330561)@nodulin MtN3 family protein, putative, expressed K15382: SLC50A, solute carrier family 50 (sugar transporter)
16 Sobic.001G238500 similar to Putative uncharacterized protein(PubMedID : 29862293)@UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed K13691: pathogen-inducible salicylic acid glucosyltransferase
17 Sobic.007G038600 monodehydroascorbate reductase, putative, expressed K08232: monodehydroascorbate reductase (NADH)
18 Sobic.001G503000 "domain confirmed by Pfam database, expressed in leaf and root, expression induced by IAA treatment"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
19 Sobic.003G287200 WRKY23, expressed -
20 Sobic.005G115300 expressed protein -


Gene co-expression network
sample Sobic004G156300 Sobic004G156300 Sobic004G156250 Sobic004G156250 Sobic004G156300--Sobic004G156250 Sobic006G117500 Sobic006G117500 Sobic004G156300--Sobic006G117500 Sobic004G108800 Sobic004G108800 Sobic004G156300--Sobic004G108800 Sobic005G104200 Sobic005G104200 Sobic004G156300--Sobic005G104200 Sobic005G149600 Sobic005G149600 Sobic004G156300--Sobic005G149600 Sobic005G066000 Sobic005G066000 Sobic004G156300--Sobic005G066000 Sobic002G163200 Sobic002G163200 Sobic004G156300--Sobic002G163200 Sobic001G131001 Sobic001G131001 Sobic004G156300--Sobic001G131001 Sobic005G089200 Sobic005G089200 Sobic004G156300--Sobic005G089200 Sobic004G156250--Sobic004G108800 Sobic004G156250--Sobic005G104200 Sobic001G238500 Sobic001G238500 Sobic004G156250--Sobic001G238500 Sobic004G156250--Sobic005G149600 Sobic004G156250--Sobic001G131001 Sobic004G126500 Sobic004G126500 Sobic004G156250--Sobic004G126500 Sobic009G015166 Sobic009G015166 Sobic004G156250--Sobic009G015166 Sobic004G156250--Sobic006G117500 Sobic004G156250--Sobic005G089200 Sobic006G117500--Sobic005G104200 Sobic010G274400 Sobic010G274400 Sobic006G117500--Sobic010G274400 Sobic006G117500--Sobic004G108800 Sobic001G506600 Sobic001G506600 Sobic006G117500--Sobic001G506600 Sobic006G117500--Sobic009G015166 Sobic005G066300 Sobic005G066300 Sobic006G117500--Sobic005G066300 Sobic010G096700 Sobic010G096700 Sobic006G117500--Sobic010G096700 Sobic006G205500 Sobic006G205500 Sobic006G117500--Sobic006G205500 Sobic006G117500--Sobic002G163200 Sobic004G108800--Sobic005G149600 Sobic004G108800--Sobic005G089200 Sobic007G156800 Sobic007G156800 Sobic004G108800--Sobic007G156800 Sobic004G108800--Sobic006G117500 Sobic004G108800--Sobic004G156250 Sobic003G015200 Sobic003G015200 Sobic004G108800--Sobic003G015200 Sobic004G108800--Sobic009G015166 Sobic005G152500 Sobic005G152500 Sobic004G108800--Sobic005G152500 Sobic007G038500 Sobic007G038500 Sobic004G108800--Sobic007G038500 Sobic005G104200--Sobic001G238500 Sobic005G104200--Sobic001G506600 Sobic002G019100 Sobic002G019100 Sobic005G104200--Sobic002G019100 Sobic001G503000 Sobic001G503000 Sobic005G104200--Sobic001G503000 Sobic005G104200--Sobic006G117500 Sobic005G104200--Sobic004G126500 Sobic006G009700 Sobic006G009700 Sobic005G104200--Sobic006G009700 Sobic002G411000 Sobic002G411000 Sobic005G104200--Sobic002G411000 Sobic001G348800 Sobic001G348800 Sobic005G104200--Sobic001G348800 Sobic005G149600--Sobic005G089200 Sobic005G149600--Sobic004G108800 Sobic001G026300 Sobic001G026300 Sobic005G149600--Sobic001G026300 Sobic005G149600--Sobic003G015200 Sobic005G149600--Sobic006G117500 Sobic005G149600--Sobic004G156250 Sobic005G149600--Sobic005G152500 Sobic005G149600--Sobic007G156800 Sobic004G034200 Sobic004G034200 Sobic005G149600--Sobic004G034200 Sobic008G172500 Sobic008G172500 Sobic005G066000--Sobic008G172500 Sobic005G066000--Sobic005G149600 Sobic006G074200 Sobic006G074200 Sobic005G066000--Sobic006G074200 Sobic005G066000--Sobic002G163200 Sobic005G066000--Sobic006G117500 Sobic003G287200 Sobic003G287200 Sobic005G066000--Sobic003G287200 Sobic005G066000--Sobic003G015200 Sobic001G212451 Sobic001G212451 Sobic005G066000--Sobic001G212451 Sobic006G183900 Sobic006G183900 Sobic005G066000--Sobic006G183900 Sobic002G163200--Sobic006G117500 Sobic002G163200--Sobic001G503000 Sobic005G115300 Sobic005G115300 Sobic002G163200--Sobic005G115300 Sobic002G163200--Sobic001G238500 Sobic002G163200--Sobic005G104200 Sobic002G163200--Sobic003G287200 Sobic002G163200--Sobic001G506600 Sobic002G163200--Sobic005G066300 Sobic002G163200--Sobic004G108800 Sobic001G131001--Sobic004G156250 Sobic001G131001--Sobic005G104200 Sobic001G131001--Sobic001G238500 Sobic001G131001--Sobic001G348800 Sobic008G133000 Sobic008G133000 Sobic001G131001--Sobic008G133000 Sobic001G131001--Sobic004G126500 Sobic001G464300 Sobic001G464300 Sobic001G131001--Sobic001G464300 Sobic001G131001--Sobic005G115300 Sobic001G131001--Sobic006G117500 Sobic005G089200--Sobic005G149600 Sobic005G089200--Sobic004G108800 Sobic005G089200--Sobic001G026300 Sobic005G089200--Sobic005G152500 Sobic005G089200--Sobic003G015200 Sobic005G089200--Sobic006G117500 Sobic010G170300 Sobic010G170300 Sobic005G089200--Sobic010G170300 Sobic005G089200--Sobic007G156800 Sobic005G089200--Sobic004G034200
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.