Gene annotation
Transcriptome id Sobic.007G018550.1
Synonym -
Functional annotation -
UniProt A0A1Z5R7P5
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os10g12290.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G396400 expressed protein -
2 Sobic.010G035900 expressed protein -
3 Sobic.009G091200 ubiquitin fusion protein, putative, expressed -
4 Sobic.009G027800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@phospholipase C, putative, expressed K05857: phosphatidylinositol phospholipase C, delta
5 Sobic.001G132800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CAMK_CAMK_like.21 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
6 Sobic.005G115800 cytochrome P450, putative, expressed -
7 Sobic.002G112300 subtilisin-like protease, putative, expressed -
8 Sobic.005G121200 "similar to HVA22-like protein e, putative, expressed"(PubMedID : 29862293)@SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@HVA22, putative, expressed K17279: receptor expression-enhancing protein 5/6
9 Sobic.004G257800 chloride transporter, chloride channel family, putative, expressed -
10 Sobic.005G152500 - -
11 Sobic.004G303600 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
12 Sobic.007G054500 ABC-2 type transporter domain containing protein, expressed -
13 Sobic.001G108350 - -
14 Sobic.001G460300 expressed protein -
15 Sobic.001G080300 peroxidase precursor, putative, expressed K00430: peroxidase
16 Sobic.005G110490 - -
17 Sobic.003G019700 GDSL-like lipase/acylhydrolase, putative, expressed -
18 Sobic.010G170300 Os9bglu31 - beta-glucosidase, dhurrinase, similar to G. max hydroxyisourate hydrolase, expressed K01188: beta-glucosidase
19 Sobic.001G424000 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@fringe-related protein, putative, expressed -
20 Sobic.005G092000 resistance protein, putative, expressed -


Gene co-expression network
sample Sobic007G018550 Sobic007G018550 Sobic001G396400 Sobic001G396400 Sobic007G018550--Sobic001G396400 Sobic010G035900 Sobic010G035900 Sobic007G018550--Sobic010G035900 Sobic009G091200 Sobic009G091200 Sobic007G018550--Sobic009G091200 Sobic009G027800 Sobic009G027800 Sobic007G018550--Sobic009G027800 Sobic001G132800 Sobic001G132800 Sobic007G018550--Sobic001G132800 Sobic005G115800 Sobic005G115800 Sobic007G018550--Sobic005G115800 Sobic002G112300 Sobic002G112300 Sobic007G018550--Sobic002G112300 Sobic005G121200 Sobic005G121200 Sobic007G018550--Sobic005G121200 Sobic004G257800 Sobic004G257800 Sobic007G018550--Sobic004G257800 Sobic001G396400--Sobic007G018550 Sobic001G396400--Sobic010G035900 Sobic001G396400--Sobic001G132800 Sobic001G396400--Sobic005G121200 Sobic001G396400--Sobic009G027800 Sobic001G396400--Sobic004G257800 Sobic001G396400--Sobic002G112300 Sobic001G396400--Sobic005G115800 Sobic003G019700 Sobic003G019700 Sobic001G396400--Sobic003G019700 Sobic005G092000 Sobic005G092000 Sobic010G035900--Sobic005G092000 Sobic010G035900--Sobic001G396400 Sobic010G035900--Sobic001G132800 Sobic008G087400 Sobic008G087400 Sobic010G035900--Sobic008G087400 Sobic010G035900--Sobic009G027800 Sobic005G110490 Sobic005G110490 Sobic010G035900--Sobic005G110490 Sobic007G172500 Sobic007G172500 Sobic010G035900--Sobic007G172500 Sobic002G167000 Sobic002G167000 Sobic010G035900--Sobic002G167000 Sobic004G172100 Sobic004G172100 Sobic010G035900--Sobic004G172100 Sobic005G152500 Sobic005G152500 Sobic009G091200--Sobic005G152500 Sobic009G091200--Sobic007G018550 Sobic009G111901 Sobic009G111901 Sobic009G091200--Sobic009G111901 Sobic005G089200 Sobic005G089200 Sobic009G091200--Sobic005G089200 Sobic009G015166 Sobic009G015166 Sobic009G091200--Sobic009G015166 Sobic005G079400 Sobic005G079400 Sobic009G091200--Sobic005G079400 Sobic007G154100 Sobic007G154100 Sobic009G091200--Sobic007G154100 Sobic005G149600 Sobic005G149600 Sobic009G091200--Sobic005G149600 Sobic006G108300 Sobic006G108300 Sobic009G091200--Sobic006G108300 Sobic009G027800--Sobic010G035900 Sobic009G027800--Sobic002G112300 Sobic009G027800--Sobic001G396400 Sobic007G038500 Sobic007G038500 Sobic009G027800--Sobic007G038500 Sobic004G034200 Sobic004G034200 Sobic009G027800--Sobic004G034200 Sobic004G043301 Sobic004G043301 Sobic009G027800--Sobic004G043301 Sobic009G027800--Sobic005G152500 Sobic004G108800 Sobic004G108800 Sobic009G027800--Sobic004G108800 Sobic007G156800 Sobic007G156800 Sobic009G027800--Sobic007G156800 Sobic007G054500 Sobic007G054500 Sobic001G132800--Sobic007G054500 Sobic001G132800--Sobic001G396400 Sobic001G132800--Sobic005G110490 Sobic001G132800--Sobic010G035900 Sobic006G156600 Sobic006G156600 Sobic001G132800--Sobic006G156600 Sobic001G132800--Sobic002G112300 Sobic001G108350 Sobic001G108350 Sobic001G132800--Sobic001G108350 Sobic007G009500 Sobic007G009500 Sobic001G132800--Sobic007G009500 Sobic006G185900 Sobic006G185900 Sobic001G132800--Sobic006G185900 Sobic007G166900 Sobic007G166900 Sobic005G115800--Sobic007G166900 Sobic010G006700 Sobic010G006700 Sobic005G115800--Sobic010G006700 Sobic004G310600 Sobic004G310600 Sobic005G115800--Sobic004G310600 Sobic001G159850 Sobic001G159850 Sobic005G115800--Sobic001G159850 Sobic002G112300--Sobic009G027800 Sobic002G112300--Sobic001G132800 Sobic002G112300--Sobic001G396400 Sobic003G015200 Sobic003G015200 Sobic002G112300--Sobic003G015200 Sobic002G112300--Sobic007G018550 Sobic002G112300--Sobic004G108800 Sobic002G112300--Sobic005G152500 Sobic002G112300--Sobic005G089200 Sobic002G112300--Sobic010G035900 Sobic001G127800 Sobic001G127800 Sobic005G121200--Sobic001G127800 Sobic001G460300 Sobic001G460300 Sobic005G121200--Sobic001G460300 Sobic002G337800 Sobic002G337800 Sobic005G121200--Sobic002G337800 Sobic003G278700 Sobic003G278700 Sobic005G121200--Sobic003G278700 Sobic009G030200 Sobic009G030200 Sobic005G121200--Sobic009G030200 Sobic005G121200--Sobic001G396400 Sobic003G198200 Sobic003G198200 Sobic005G121200--Sobic003G198200 Sobic007G152800 Sobic007G152800 Sobic005G121200--Sobic007G152800 Sobic003G198150 Sobic003G198150 Sobic005G121200--Sobic003G198150 Sobic004G257800--Sobic006G156600 Sobic004G257800--Sobic004G172100 Sobic002G075500 Sobic002G075500 Sobic004G257800--Sobic002G075500 Sobic004G257800--Sobic001G108350 Sobic002G372800 Sobic002G372800 Sobic004G257800--Sobic002G372800 Sobic007G180900 Sobic007G180900 Sobic004G257800--Sobic007G180900 Sobic004G257800--Sobic007G009500 Sobic009G099000 Sobic009G099000 Sobic004G257800--Sobic009G099000 Sobic004G257800--Sobic005G110490
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.