Gene annotation
Transcriptome id Sobic.005G053700.1
Synonym
Functional annotation -
UniProt A0A1B6PQA8
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G110541 - K16054: methylthioribulose 1-phosphate dehydratase / enolase-phosphatase E1
2 Sobic.006G030800 glucose-6-phosphate 1-dehydrogenase, chloroplast precursor, putative, expressed K00036: G6PD, glucose-6-phosphate 1-dehydrogenase
3 Sobic.005G053800 pollen signalling protein with adenylyl cyclase activity, putative, expressed -
4 Sobic.005G100800 initiation factor 2 subunit family domain containing protein, expressed K08963: methylthioribose-1-phosphate isomerase
5 Sobic.007G021100 carrier, putative, expressed -
6 Sobic.001G353200 ctr copper transporter family protein, putative, expressed K14686: SLC31A1, solute carrier family 31 (copper transporter), member 1
7 Sobic.007G021200 carrier, putative, expressed -
8 Sobic.005G115600 6-phosphogluconate dehydrogenase, decarboxylating, putative, expressed K00033: PGD, gnd, 6-phosphogluconate dehydrogenase
9 Sobic.003G192600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@receptor-like kinase ARK1AS, putative, expressed -
10 Sobic.010G055100 OsWAK63 - OsWAK receptor-like protein kinase, expressed -
11 Sobic.005G197400 NBS-LRR disease resistance protein, putative, expressed -
12 Sobic.003G020500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@GDSL-like lipase/acylhydrolase, putative, expressed -
13 Sobic.003G258800 glutamate synthase, chloroplast precursor, putative, expressed K00264: glutamate synthase (NADH)
14 Sobic.007G064900 metal cation transporter, putative, expressed K14709: SLC39A1_2_3, solute carrier family 39 (zinc transporter), member 1/2/3
15 Sobic.010G187500 CRAL/TRIO domain containing protein, expressed -
16 Sobic.007G193200 MTA/SAH nucleosidase, putative, expressed K01244: 5'-methylthioadenosine nucleosidase
17 Sobic.003G193000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@leucine rich repeat protein, putative, expressed -
18 Sobic.005G110511 - -
19 Sobic.004G009200 transporter, major facilitator family, putative, expressed K02575: NRT, narK, nrtP, MFS transporter, NNP family, nitrate/nitrite transporter
20 Sobic.005G097900 major facilitator superfamily antiporter, putative, expressed -


Gene co-expression network
sample Sobic005G053700 Sobic005G053700 Sobic005G110541 Sobic005G110541 Sobic005G053700--Sobic005G110541 Sobic006G030800 Sobic006G030800 Sobic005G053700--Sobic006G030800 Sobic005G053800 Sobic005G053800 Sobic005G053700--Sobic005G053800 Sobic005G100800 Sobic005G100800 Sobic005G053700--Sobic005G100800 Sobic007G021100 Sobic007G021100 Sobic005G053700--Sobic007G021100 Sobic001G353200 Sobic001G353200 Sobic005G053700--Sobic001G353200 Sobic007G021200 Sobic007G021200 Sobic005G053700--Sobic007G021200 Sobic005G115600 Sobic005G115600 Sobic005G053700--Sobic005G115600 Sobic003G192600 Sobic003G192600 Sobic005G053700--Sobic003G192600 Sobic005G110541--Sobic005G100800 Sobic007G193200 Sobic007G193200 Sobic005G110541--Sobic007G193200 Sobic005G110541--Sobic001G353200 Sobic010G187500 Sobic010G187500 Sobic005G110541--Sobic010G187500 Sobic004G261500 Sobic004G261500 Sobic005G110541--Sobic004G261500 Sobic001G443100 Sobic001G443100 Sobic005G110541--Sobic001G443100 Sobic007G212000 Sobic007G212000 Sobic005G110541--Sobic007G212000 Sobic001G243100 Sobic001G243100 Sobic005G110541--Sobic001G243100 Sobic004G299500 Sobic004G299500 Sobic005G110541--Sobic004G299500 Sobic006G030800--Sobic005G115600 Sobic010G213600 Sobic010G213600 Sobic006G030800--Sobic010G213600 Sobic006G030800--Sobic005G100800 Sobic009G058400 Sobic009G058400 Sobic006G030800--Sobic009G058400 Sobic003G020500 Sobic003G020500 Sobic006G030800--Sobic003G020500 Sobic004G008600 Sobic004G008600 Sobic006G030800--Sobic004G008600 Sobic005G134200 Sobic005G134200 Sobic006G030800--Sobic005G134200 Sobic001G218500 Sobic001G218500 Sobic006G030800--Sobic001G218500 Sobic009G060700 Sobic009G060700 Sobic006G030800--Sobic009G060700 Sobic005G053200 Sobic005G053200 Sobic005G053800--Sobic005G053200 Sobic010G227800 Sobic010G227800 Sobic005G053800--Sobic010G227800 Sobic004G057500 Sobic004G057500 Sobic005G053800--Sobic004G057500 Sobic005G053800--Sobic005G053700 Sobic005G102900 Sobic005G102900 Sobic005G053800--Sobic005G102900 Sobic010G175400 Sobic010G175400 Sobic005G053800--Sobic010G175400 Sobic006G259700 Sobic006G259700 Sobic005G053800--Sobic006G259700 Sobic003G174301 Sobic003G174301 Sobic005G053800--Sobic003G174301 Sobic006G225900 Sobic006G225900 Sobic005G053800--Sobic006G225900 Sobic005G100800--Sobic007G193200 Sobic005G100800--Sobic005G110541 Sobic005G100800--Sobic004G261500 Sobic008G109400 Sobic008G109400 Sobic005G100800--Sobic008G109400 Sobic001G271300 Sobic001G271300 Sobic005G100800--Sobic001G271300 Sobic001G395900 Sobic001G395900 Sobic005G100800--Sobic001G395900 Sobic003G154500 Sobic003G154500 Sobic005G100800--Sobic003G154500 Sobic006G230200 Sobic006G230200 Sobic005G100800--Sobic006G230200 Sobic002G041100 Sobic002G041100 Sobic005G100800--Sobic002G041100 Sobic007G021100--Sobic008G109400 Sobic007G021100--Sobic004G299500 Sobic007G021100--Sobic001G395900 Sobic007G202480 Sobic007G202480 Sobic007G021100--Sobic007G202480 Sobic001G153100 Sobic001G153100 Sobic007G021100--Sobic001G153100 Sobic006G229901 Sobic006G229901 Sobic007G021100--Sobic006G229901 Sobic001G415100 Sobic001G415100 Sobic007G021100--Sobic001G415100 Sobic006G230100 Sobic006G230100 Sobic007G021100--Sobic006G230100 Sobic007G021100--Sobic006G230200 Sobic001G353200--Sobic007G193200 Sobic001G243150 Sobic001G243150 Sobic001G353200--Sobic001G243150 Sobic005G046400 Sobic005G046400 Sobic001G353200--Sobic005G046400 Sobic009G065700 Sobic009G065700 Sobic001G353200--Sobic009G065700 Sobic002G111900 Sobic002G111900 Sobic001G353200--Sobic002G111900 Sobic010G191600 Sobic010G191600 Sobic001G353200--Sobic010G191600 Sobic009G225800 Sobic009G225800 Sobic001G353200--Sobic009G225800 Sobic003G441800 Sobic003G441800 Sobic001G353200--Sobic003G441800 Sobic002G289500 Sobic002G289500 Sobic001G353200--Sobic002G289500 Sobic007G021200--Sobic005G100800 Sobic003G106300 Sobic003G106300 Sobic007G021200--Sobic003G106300 Sobic007G021200--Sobic007G193200 Sobic007G021200--Sobic005G110541 Sobic007G021200--Sobic001G353200 Sobic007G021200--Sobic007G021100 Sobic004G161900 Sobic004G161900 Sobic007G021200--Sobic004G161900 Sobic004G153100 Sobic004G153100 Sobic007G021200--Sobic004G153100 Sobic007G021200--Sobic004G261500 Sobic005G115600--Sobic006G030800 Sobic009G017500 Sobic009G017500 Sobic005G115600--Sobic009G017500 Sobic003G279800 Sobic003G279800 Sobic005G115600--Sobic003G279800 Sobic002G383900 Sobic002G383900 Sobic005G115600--Sobic002G383900 Sobic003G157700 Sobic003G157700 Sobic005G115600--Sobic003G157700 Sobic002G083600 Sobic002G083600 Sobic005G115600--Sobic002G083600 Sobic006G256200 Sobic006G256200 Sobic005G115600--Sobic006G256200 Sobic003G258800 Sobic003G258800 Sobic005G115600--Sobic003G258800 Sobic003G105000 Sobic003G105000 Sobic005G115600--Sobic003G105000 Sobic004G323900 Sobic004G323900 Sobic003G192600--Sobic004G323900 Sobic003G017601 Sobic003G017601 Sobic003G192600--Sobic003G017601 Sobic003G192600--Sobic005G110541 Sobic005G071900 Sobic005G071900 Sobic003G192600--Sobic005G071900 Sobic010G122000 Sobic010G122000 Sobic003G192600--Sobic010G122000 Sobic005G110511 Sobic005G110511 Sobic003G192600--Sobic005G110511 Sobic003G192600--Sobic001G353200 Sobic003G192600--Sobic004G161900 Sobic003G079100 Sobic003G079100 Sobic003G192600--Sobic003G079100
Octagon: transcription factors


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